Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU7-154P-201ENST00000516194 62 ntBASIC-1.51□□□□□ -2.65
PRKDCP78527 RNU6-308P-201ENST00000390957 107 ntBASIC-1.52□□□□□ -2.65
PRKDCP78527 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.52□□□□□ -2.65
PRKDCP78527 RNA5SP106-201ENST00000517274 100 ntBASIC-1.52□□□□□ -2.65
PRKDCP78527 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.52□□□□□ -2.65
PRKDCP78527 AC012531.4-201ENST00000616509 177 ntBASIC-1.52□□□□□ -2.65
PRKDCP78527 TPTEP1-208ENST00000636884 213 ntBASIC-1.52□□□□□ -2.65
PRKDCP78527 RNU6-510P-201ENST00000391239 108 ntBASIC-1.52□□□□□ -2.65
PRKDCP78527 MIR2053-201ENST00000459295 91 ntBASIC-1.52□□□□□ -2.65
PRKDCP78527 AC013791.1-201ENST00000616619 62 ntBASIC-1.52□□□□□ -2.65
PRKDCP78527 MIR624-201ENST00000385217 97 ntBASIC-1.52□□□□□ -2.65
PRKDCP78527 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.52□□□□□ -2.65
PRKDCP78527 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.52□□□□□ -2.65
PRKDCP78527 AC009779.6-201ENST00000603972 165 ntBASIC-1.52□□□□□ -2.65
PRKDCP78527 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 MIR548G-201ENST00000408442 89 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 MTATP6P29-201ENST00000415057 132 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 RNU6-273P-201ENST00000516937 96 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 RNU6-264P-201ENST00000517134 104 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 AC018645.2-201ENST00000609151 472 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 RNU6-38P-201ENST00000384085 107 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 FGF7P2-201ENST00000332473 296 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 MIR519A2-201ENST00000384990 87 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 PMCHL1-202ENST00000423102 261 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 SNORD42B-201ENST00000458893 67 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 RNA5SP147-201ENST00000516493 109 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 AC097639.2-201ENST00000603159 172 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 AC037487.3-201ENST00000606668 112 ntBASIC-1.53□□□□□ -2.65
PRKDCP78527 MIR451A-201ENST00000385059 72 ntBASIC-1.54□□□□□ -2.66
PRKDCP78527 RNU6-383P-201ENST00000410864 94 ntBASIC-1.54□□□□□ -2.66
PRKDCP78527 MTND3P16-201ENST00000452205 344 ntBASIC-1.54□□□□□ -2.66
PRKDCP78527 RNU6-888P-201ENST00000363010 101 ntBASIC-1.54□□□□□ -2.66
PRKDCP78527 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.54□□□□□ -2.66
PRKDCP78527 RNA5SP153-201ENST00000516498 76 ntBASIC-1.54□□□□□ -2.66
PRKDCP78527 AP003461.1-201ENST00000528866 78 ntBASIC-1.54□□□□□ -2.66
PRKDCP78527 AP000720.1-201ENST00000625091 483 ntBASIC-1.54□□□□□ -2.66
PRKDCP78527 RNU6-522P-201ENST00000364497 107 ntBASIC-1.54□□□□□ -2.66
PRKDCP78527 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.54□□□□□ -2.66
PRKDCP78527 AC138907.4-201ENST00000570107 226 ntBASIC-1.54□□□□□ -2.66
PRKDCP78527 SNORD113-5-201ENST00000607261 78 ntBASIC-1.54□□□□□ -2.66
PRKDCP78527 AC084781.2-201ENST00000615568 161 ntBASIC-1.54□□□□□ -2.66
PRKDCP78527 RPS29P25-201ENST00000481709 171 ntBASIC-1.55□□□□□ -2.66
PRKDCP78527 AC097484.2-201ENST00000509147 251 ntBASIC-1.55□□□□□ -2.66
PRKDCP78527 AL021707.8-201ENST00000609428 183 ntBASIC-1.55□□□□□ -2.66
PRKDCP78527 MIR6841-201ENST00000637129 72 ntBASIC-1.55□□□□□ -2.66
PRKDCP78527 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.55□□□□□ -2.66
PRKDCP78527 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.55□□□□□ -2.66
PRKDCP78527 AC005899.2-201ENST00000584353 90 ntBASIC-1.55□□□□□ -2.66
PRKDCP78527 MIR5688-201ENST00000580619 83 ntBASIC-1.55□□□□□ -2.66
PRKDCP78527 RNU6-495P-201ENST00000362995 107 ntBASIC-1.55□□□□□ -2.66
PRKDCP78527 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.55□□□□□ -2.66
PRKDCP78527 MIR521-2-201ENST00000384818 87 ntBASIC-1.55□□□□□ -2.66
PRKDCP78527 RNU6-408P-201ENST00000515910 100 ntBASIC-1.55□□□□□ -2.66
PRKDCP78527 MTND3P12-201ENST00000559068 328 ntBASIC-1.55□□□□□ -2.66
PRKDCP78527 RNU4-50P-201ENST00000364361 141 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 RNU6-935P-201ENST00000410371 100 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 RNU2-38P-201ENST00000410856 79 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 RNU6-261P-201ENST00000459506 102 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 RN7SKP295-201ENST00000517264 153 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 AC090617.8-201ENST00000623339 167 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 RNU6-647P-201ENST00000364243 107 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 SNORD116.1-201ENST00000365628 92 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 MIR203A-201ENST00000384836 110 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 RNU6-191P-201ENST00000516295 94 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 CYP3A54P-201ENST00000566950 75 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 MIR6509-201ENST00000614603 85 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 RNU6-373P-201ENST00000411247 98 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 RNU7-2P-201ENST00000516096 62 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 MIR4536-1-201ENST00000583537 88 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 AC006254.2-201ENST00000603259 279 ntBASIC-1.56□□□□□ -2.66
PRKDCP78527 RNU6-79P-201ENST00000362511 107 ntBASIC-1.57□□□□□ -2.66
PRKDCP78527 RNU6-1257P-201ENST00000384625 110 ntBASIC-1.57□□□□□ -2.66
PRKDCP78527 C8orf59P2-201ENST00000603441 271 ntBASIC-1.57□□□□□ -2.66
PRKDCP78527 AL512310.12-203ENST00000640543 90 ntBASIC-1.57□□□□□ -2.66
PRKDCP78527 SNORA63.2-201ENST00000362603 126 ntBASIC-1.57□□□□□ -2.66
PRKDCP78527 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.57□□□□□ -2.66
PRKDCP78527 MIR376B-201ENST00000614515 100 ntBASIC-1.57□□□□□ -2.66
PRKDCP78527 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.57□□□□□ -2.66
PRKDCP78527 SNORA79-201ENST00000408376 140 ntBASIC-1.57□□□□□ -2.66
PRKDCP78527 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.57□□□□□ -2.66
PRKDCP78527 RNU7-4P-201ENST00000516961 62 ntBASIC-1.57□□□□□ -2.66
PRKDCP78527 RNU6-80P-201ENST00000384195 107 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-21P-201ENST00000384710 107 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 AC019235.1-201ENST00000503847 207 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 SNORD77.4-201ENST00000516158 81 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 TRDV1-202ENST00000621643 102 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.58□□□□□ -2.66
PRKDCP78527 SNORA69.1-201ENST00000390904 137 ntBASIC-1.58□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 294 ms