Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU6-535P-201ENST00000384722 107 ntBASIC0.51□□□□□ -2.33
CDH11P55287 MIR7-2-201ENST00000384970 110 ntBASIC0.51□□□□□ -2.33
CDH11P55287 RNU6-659P-201ENST00000516454 104 ntBASIC0.51□□□□□ -2.33
CDH11P55287 RNA5SP94-201ENST00000516917 108 ntBASIC0.51□□□□□ -2.33
CDH11P55287 DEFB131E-201ENST00000532329 154 ntBASIC0.51□□□□□ -2.33
CDH11P55287 MIR3914-2-201ENST00000637339 95 ntBASIC0.51□□□□□ -2.33
CDH11P55287 Y_RNA.56-201ENST00000362798 112 ntBASIC0.5□□□□□ -2.33
CDH11P55287 Y_RNA.71-201ENST00000362892 104 ntBASIC0.5□□□□□ -2.33
CDH11P55287 SNORD18A-201ENST00000363753 72 ntBASIC0.5□□□□□ -2.33
CDH11P55287 Y_RNA.344-201ENST00000365381 112 ntBASIC0.5□□□□□ -2.33
CDH11P55287 RNU6-81P-201ENST00000365608 104 ntBASIC0.5□□□□□ -2.33
CDH11P55287 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
CDH11P55287 RNY1P4-201ENST00000384595 115 ntBASIC0.5□□□□□ -2.33
CDH11P55287 MIR548M-201ENST00000408260 86 ntBASIC0.5□□□□□ -2.33
CDH11P55287 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.5□□□□□ -2.33
CDH11P55287 RNU4-54P-201ENST00000516428 129 ntBASIC0.5□□□□□ -2.33
CDH11P55287 AP001362.1-201ENST00000625165 124 ntBASIC0.5□□□□□ -2.33
CDH11P55287 AL157777.2-201ENST00000258070 137 ntBASIC0.49□□□□□ -2.33
CDH11P55287 SNORA36.1-201ENST00000363424 132 ntBASIC0.49□□□□□ -2.33
CDH11P55287 Y_RNA.346-201ENST00000365385 112 ntBASIC0.49□□□□□ -2.33
CDH11P55287 MIR759-201ENST00000390224 91 ntBASIC0.49□□□□□ -2.33
CDH11P55287 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.49□□□□□ -2.33
CDH11P55287 AL353813.1-201ENST00000440700 253 ntBASIC0.49□□□□□ -2.33
CDH11P55287 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
CDH11P55287 RNU6-521P-201ENST00000516663 105 ntBASIC0.49□□□□□ -2.33
CDH11P55287 AC243829.3-201ENST00000622177 108 ntBASIC0.49□□□□□ -2.33
CDH11P55287 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
CDH11P55287 SNORA63.5-201ENST00000363548 123 ntBASIC0.48□□□□□ -2.33
CDH11P55287 RNY4P6-201ENST00000363667 96 ntBASIC0.48□□□□□ -2.33
CDH11P55287 RNA5SP517-201ENST00000364724 117 ntBASIC0.48□□□□□ -2.33
CDH11P55287 MIR34C-201ENST00000384831 77 ntBASIC0.48□□□□□ -2.33
CDH11P55287 MIR936-201ENST00000401264 98 ntBASIC0.48□□□□□ -2.33
CDH11P55287 SUMO1P3-201ENST00000439961 304 ntBASIC0.48□□□□□ -2.33
CDH11P55287 RN7SKP12-201ENST00000516275 143 ntBASIC0.48□□□□□ -2.33
CDH11P55287 RNU6-229P-201ENST00000516614 102 ntBASIC0.48□□□□□ -2.33
CDH11P55287 RNU6-363P-201ENST00000362895 105 ntBASIC0.47□□□□□ -2.33
CDH11P55287 Y_RNA.360-201ENST00000365512 102 ntBASIC0.47□□□□□ -2.33
CDH11P55287 SNORD116-14-201ENST00000383894 92 ntBASIC0.47□□□□□ -2.33
CDH11P55287 SNORD116-17-201ENST00000383929 92 ntBASIC0.47□□□□□ -2.33
CDH11P55287 SNORD116-15-201ENST00000384445 92 ntBASIC0.47□□□□□ -2.33
CDH11P55287 SNORD116-19-201ENST00000384729 92 ntBASIC0.47□□□□□ -2.33
CDH11P55287 RNU6-679P-201ENST00000391003 106 ntBASIC0.47□□□□□ -2.33
CDH11P55287 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
CDH11P55287 AC244505.6-201ENST00000452829 130 ntBASIC0.47□□□□□ -2.33
CDH11P55287 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
CDH11P55287 RNU6-135P-201ENST00000516769 101 ntBASIC0.47□□□□□ -2.33
CDH11P55287 RNA5SP47-201ENST00000517230 109 ntBASIC0.47□□□□□ -2.33
CDH11P55287 MIR6828-201ENST00000636181 60 ntBASIC0.47□□□□□ -2.33
CDH11P55287 MIR101-2-201ENST00000362195 79 ntBASIC0.46□□□□□ -2.34
CDH11P55287 RNU4-67P-201ENST00000364569 141 ntBASIC0.46□□□□□ -2.34
CDH11P55287 RNU6-865P-201ENST00000364772 107 ntBASIC0.46□□□□□ -2.34
CDH11P55287 Y_RNA.362-201ENST00000365518 110 ntBASIC0.46□□□□□ -2.34
CDH11P55287 RNU6-959P-201ENST00000384671 107 ntBASIC0.46□□□□□ -2.34
CDH11P55287 SNORD28-201ENST00000384706 75 ntBASIC0.46□□□□□ -2.34
CDH11P55287 RNU6-1006P-201ENST00000516998 103 ntBASIC0.46□□□□□ -2.34
CDH11P55287 MIR4679-2-201ENST00000578358 77 ntBASIC0.46□□□□□ -2.34
CDH11P55287 MIR4500-201ENST00000579472 76 ntBASIC0.46□□□□□ -2.34
CDH11P55287 AC092634.7-201ENST00000621022 103 ntBASIC0.46□□□□□ -2.34
CDH11P55287 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CDH11P55287 Y_RNA.563-201ENST00000384707 108 ntBASIC0.45□□□□□ -2.34
CDH11P55287 AC092628.1-201ENST00000436250 252 ntBASIC0.45□□□□□ -2.34
CDH11P55287 MIR4711-201ENST00000578274 70 ntBASIC0.45□□□□□ -2.34
CDH11P55287 MIR4639-201ENST00000584938 69 ntBASIC0.45□□□□□ -2.34
CDH11P55287 MIR6779-201ENST00000617283 64 ntBASIC0.45□□□□□ -2.34
CDH11P55287 RNU6-1313P-201ENST00000362622 102 ntBASIC0.44□□□□□ -2.34
CDH11P55287 SNORD114-23-201ENST00000363536 72 ntBASIC0.44□□□□□ -2.34
CDH11P55287 SNORD118-201ENST00000363593 134 ntBASIC0.44□□□□□ -2.34
CDH11P55287 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
CDH11P55287 SNORA8.2-201ENST00000384372 139 ntBASIC0.44□□□□□ -2.34
CDH11P55287 Y_RNA.567-201ENST00000384736 106 ntBASIC0.44□□□□□ -2.34
CDH11P55287 MIR548I2-201ENST00000408348 149 ntBASIC0.44□□□□□ -2.34
CDH11P55287 BX276092.1-201ENST00000427368 251 ntBASIC0.44□□□□□ -2.34
CDH11P55287 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
CDH11P55287 SNRPGP12-201ENST00000449481 213 ntBASIC0.44□□□□□ -2.34
CDH11P55287 TRAJ51-201ENST00000504127 63 ntBASIC0.44□□□□□ -2.34
CDH11P55287 RNU6-469P-201ENST00000516253 101 ntBASIC0.44□□□□□ -2.34
CDH11P55287 RNU6-1018P-201ENST00000516577 106 ntBASIC0.44□□□□□ -2.34
CDH11P55287 MIR548H5-201ENST00000580314 60 ntBASIC0.44□□□□□ -2.34
CDH11P55287 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.44□□□□□ -2.34
CDH11P55287 Y_RNA.85-201ENST00000363014 111 ntBASIC0.43□□□□□ -2.34
CDH11P55287 Y_RNA.353-201ENST00000365440 108 ntBASIC0.43□□□□□ -2.34
CDH11P55287 MIR518A1-201ENST00000385068 85 ntBASIC0.43□□□□□ -2.34
CDH11P55287 SNORA40.8-201ENST00000411034 126 ntBASIC0.43□□□□□ -2.34
CDH11P55287 RPL39P34-201ENST00000477141 156 ntBASIC0.43□□□□□ -2.34
CDH11P55287 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
CDH11P55287 SNORD33.1-201ENST00000516213 88 ntBASIC0.43□□□□□ -2.34
CDH11P55287 SCARNA16.5-201ENST00000517114 183 ntBASIC0.43□□□□□ -2.34
CDH11P55287 AC138869.1-201ENST00000568623 124 ntBASIC0.43□□□□□ -2.34
CDH11P55287 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
CDH11P55287 AL035470.1-201ENST00000622571 220 ntBASIC0.43□□□□□ -2.34
CDH11P55287 AL162726.3-218ENST00000636401 95 ntBASIC0.43□□□□□ -2.34
CDH11P55287 RNU6-571P-201ENST00000384128 107 ntBASIC0.42□□□□□ -2.34
CDH11P55287 MIR193B-201ENST00000384907 83 ntBASIC0.42□□□□□ -2.34
CDH11P55287 MIR519A1-201ENST00000385257 85 ntBASIC0.42□□□□□ -2.34
CDH11P55287 SNORA7.5-201ENST00000410672 110 ntBASIC0.42□□□□□ -2.34
CDH11P55287 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
CDH11P55287 TMSB4XP3-201ENST00000445144 114 ntBASIC0.42□□□□□ -2.34
CDH11P55287 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.42□□□□□ -2.34
CDH11P55287 AC244669.1-204ENST00000621564 178 ntBASIC0.42□□□□□ -2.34
CDH11P55287 U6.95-201ENST00000636931 70 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 241.2 ms