Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC105081.1-201ENST00000617727 106 ntBASIC0.13□□□□□ -2.39
VCPP55072 MIR6755-201ENST00000619993 66 ntBASIC0.13□□□□□ -2.39
VCPP55072 MIR3658-201ENST00000636291 56 ntBASIC0.13□□□□□ -2.39
VCPP55072 Y_RNA.56-201ENST00000362798 112 ntBASIC0.12□□□□□ -2.39
VCPP55072 SNORA63.5-201ENST00000363548 123 ntBASIC0.12□□□□□ -2.39
VCPP55072 Y_RNA.188-201ENST00000363952 111 ntBASIC0.12□□□□□ -2.39
VCPP55072 Y_RNA.240-201ENST00000364469 95 ntBASIC0.12□□□□□ -2.39
VCPP55072 Y_RNA.299-201ENST00000364973 94 ntBASIC0.12□□□□□ -2.39
VCPP55072 RNU4-69P-201ENST00000410677 143 ntBASIC0.12□□□□□ -2.39
VCPP55072 SNX3P1X-201ENST00000414887 175 ntBASIC0.12□□□□□ -2.39
VCPP55072 Y_RNA.651-201ENST00000459380 103 ntBASIC0.12□□□□□ -2.39
VCPP55072 RNU7-123P-201ENST00000515911 60 ntBASIC0.12□□□□□ -2.39
VCPP55072 RNU1-29P-201ENST00000606574 126 ntBASIC0.12□□□□□ -2.39
VCPP55072 TUG1_4.1-201ENST00000619464 181 ntBASIC0.12□□□□□ -2.39
VCPP55072 RNU6-508P-201ENST00000363231 103 ntBASIC0.11□□□□□ -2.39
VCPP55072 RNY1P11-201ENST00000363759 113 ntBASIC0.11□□□□□ -2.39
VCPP55072 RNY1P2-201ENST00000364820 117 ntBASIC0.11□□□□□ -2.39
VCPP55072 RNU6V-201ENST00000384105 107 ntBASIC0.11□□□□□ -2.39
VCPP55072 MIR1270-201ENST00000459320 83 ntBASIC0.11□□□□□ -2.39
VCPP55072 RNU6-1232P-201ENST00000516299 86 ntBASIC0.11□□□□□ -2.39
VCPP55072 RNU6-1271P-201ENST00000517049 105 ntBASIC0.11□□□□□ -2.39
VCPP55072 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.11□□□□□ -2.39
VCPP55072 RNU6-379P-201ENST00000363813 104 ntBASIC0.1□□□□□ -2.39
VCPP55072 RNU6-309P-201ENST00000364573 106 ntBASIC0.1□□□□□ -2.39
VCPP55072 Y_RNA.298-201ENST00000364960 107 ntBASIC0.1□□□□□ -2.39
VCPP55072 RNU6-46P-201ENST00000383860 107 ntBASIC0.1□□□□□ -2.39
VCPP55072 RNU6-1126P-201ENST00000384002 107 ntBASIC0.1□□□□□ -2.39
VCPP55072 Y_RNA.423-201ENST00000384057 113 ntBASIC0.1□□□□□ -2.39
VCPP55072 RNU6-187P-201ENST00000384139 106 ntBASIC0.1□□□□□ -2.39
VCPP55072 AL603914.1-201ENST00000401964 204 ntBASIC0.1□□□□□ -2.39
VCPP55072 MIR548H2-201ENST00000408874 88 ntBASIC0.1□□□□□ -2.39
VCPP55072 Y_RNA.690-201ENST00000516603 95 ntBASIC0.1□□□□□ -2.39
VCPP55072 MIR101-1-201ENST00000362265 75 ntBASIC0.09□□□□□ -2.4
VCPP55072 Y_RNA.49-201ENST00000362714 112 ntBASIC0.09□□□□□ -2.4
VCPP55072 Y_RNA.401-201ENST00000383965 117 ntBASIC0.09□□□□□ -2.4
VCPP55072 RNU6-429P-201ENST00000384582 108 ntBASIC0.09□□□□□ -2.4
VCPP55072 Y_RNA.35-201ENST00000362601 101 ntBASIC0.08□□□□□ -2.4
VCPP55072 SNORD115-24-201ENST00000363528 82 ntBASIC0.08□□□□□ -2.4
VCPP55072 RNU6-200P-201ENST00000364743 107 ntBASIC0.08□□□□□ -2.4
VCPP55072 SNORD49B-201ENST00000365172 72 ntBASIC0.08□□□□□ -2.4
VCPP55072 RNU6-302P-201ENST00000365249 107 ntBASIC0.08□□□□□ -2.4
VCPP55072 RNU6-1321P-201ENST00000390905 107 ntBASIC0.08□□□□□ -2.4
VCPP55072 RPS29P8-201ENST00000445109 171 ntBASIC0.08□□□□□ -2.4
VCPP55072 AC244505.6-201ENST00000452829 130 ntBASIC0.08□□□□□ -2.4
VCPP55072 RNU7-120P-201ENST00000459334 63 ntBASIC0.08□□□□□ -2.4
VCPP55072 RNU6-848P-201ENST00000515948 107 ntBASIC0.08□□□□□ -2.4
VCPP55072 RNU6-617P-201ENST00000516147 107 ntBASIC0.08□□□□□ -2.4
VCPP55072 RNU6-473P-201ENST00000516164 107 ntBASIC0.08□□□□□ -2.4
VCPP55072 RNU6-1049P-201ENST00000516414 107 ntBASIC0.08□□□□□ -2.4
VCPP55072 Y_RNA.686-201ENST00000516548 134 ntBASIC0.08□□□□□ -2.4
VCPP55072 RNU6-861P-201ENST00000516745 106 ntBASIC0.08□□□□□ -2.4
VCPP55072 AC138869.1-201ENST00000568623 124 ntBASIC0.08□□□□□ -2.4
VCPP55072 MIR548H5-201ENST00000580314 60 ntBASIC0.08□□□□□ -2.4
VCPP55072 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.08□□□□□ -2.4
VCPP55072 Y_RNA.441-201ENST00000384123 112 ntBASIC0.07□□□□□ -2.4
VCPP55072 MT-TG-201ENST00000387429 68 ntBASIC0.07□□□□□ -2.4
VCPP55072 SNORD77B-201ENST00000391112 67 ntBASIC0.07□□□□□ -2.4
VCPP55072 RNU6-1135P-201ENST00000411083 103 ntBASIC0.07□□□□□ -2.4
VCPP55072 AC108059.2-201ENST00000434626 151 ntBASIC0.07□□□□□ -2.4
VCPP55072 Y_RNA.662-201ENST00000516028 97 ntBASIC0.07□□□□□ -2.4
VCPP55072 RNU6-388P-201ENST00000517012 105 ntBASIC0.07□□□□□ -2.4
VCPP55072 RNU6-389P-201ENST00000517048 105 ntBASIC0.07□□□□□ -2.4
VCPP55072 MIR4667-201ENST00000578933 66 ntBASIC0.07□□□□□ -2.4
VCPP55072 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
VCPP55072 MIR206-201ENST00000384872 86 ntBASIC0.06□□□□□ -2.4
VCPP55072 PCNPP3-201ENST00000393579 471 ntBASIC0.06□□□□□ -2.4
VCPP55072 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.06□□□□□ -2.4
VCPP55072 RNU6-138P-201ENST00000515952 107 ntBASIC0.06□□□□□ -2.4
VCPP55072 MIR4752-201ENST00000579672 72 ntBASIC0.06□□□□□ -2.4
VCPP55072 RNU7-10P-201ENST00000607194 63 ntBASIC0.06□□□□□ -2.4
VCPP55072 Y_RNA.98-201ENST00000363109 102 ntBASIC0.05□□□□□ -2.4
VCPP55072 RNA5SP214-201ENST00000363378 118 ntBASIC0.05□□□□□ -2.4
VCPP55072 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
VCPP55072 RNU6-682P-201ENST00000363843 106 ntBASIC0.05□□□□□ -2.4
VCPP55072 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
VCPP55072 Y_RNA.272-201ENST00000364696 102 ntBASIC0.05□□□□□ -2.4
VCPP55072 Y_RNA.448-201ENST00000384185 108 ntBASIC0.05□□□□□ -2.4
VCPP55072 MIR760-201ENST00000390220 80 ntBASIC0.05□□□□□ -2.4
VCPP55072 RNU7-48P-201ENST00000458875 63 ntBASIC0.05□□□□□ -2.4
VCPP55072 RNU5E-3P-201ENST00000515913 68 ntBASIC0.05□□□□□ -2.4
VCPP55072 MIR4645-201ENST00000583158 77 ntBASIC0.05□□□□□ -2.4
VCPP55072 AL137067.1-201ENST00000615933 120 ntBASIC0.05□□□□□ -2.4
VCPP55072 RNU6-726P-201ENST00000364680 107 ntBASIC0.04□□□□□ -2.4
VCPP55072 RNY4P20-201ENST00000516678 93 ntBASIC0.04□□□□□ -2.4
VCPP55072 RNY1P9-201ENST00000532431 109 ntBASIC0.04□□□□□ -2.4
VCPP55072 MIR4500-201ENST00000579472 76 ntBASIC0.04□□□□□ -2.4
VCPP55072 AC108081.1-201ENST00000604358 221 ntBASIC0.04□□□□□ -2.4
VCPP55072 Y_RNA.29-201ENST00000362570 113 ntBASIC0.03□□□□□ -2.4
VCPP55072 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
VCPP55072 RNU4-11P-201ENST00000365287 132 ntBASIC0.03□□□□□ -2.4
VCPP55072 Y_RNA.362-201ENST00000365518 110 ntBASIC0.03□□□□□ -2.4
VCPP55072 RNU6-756P-201ENST00000383997 107 ntBASIC0.03□□□□□ -2.4
VCPP55072 RNU6-1104P-201ENST00000384723 104 ntBASIC0.03□□□□□ -2.4
VCPP55072 MIR635-201ENST00000384830 98 ntBASIC0.03□□□□□ -2.4
VCPP55072 MIR548L-201ENST00000408303 86 ntBASIC0.03□□□□□ -2.4
VCPP55072 HMGN2P22-201ENST00000427588 175 ntBASIC0.03□□□□□ -2.4
VCPP55072 RNU7-129P-201ENST00000516128 62 ntBASIC0.03□□□□□ -2.4
VCPP55072 RNU7-161P-201ENST00000517289 62 ntBASIC0.03□□□□□ -2.4
VCPP55072 RNA5SP128-201ENST00000365305 116 ntBASIC0.02□□□□□ -2.41
VCPP55072 RNU6-1184P-201ENST00000384588 108 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms