Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC022709.1-201ENST00000615967 87 ntBASIC0.51□□□□□ -2.33
APOBEC1P41238 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.51□□□□□ -2.33
APOBEC1P41238 RNU6-1229P-201ENST00000364295 107 ntBASIC0.5□□□□□ -2.33
APOBEC1P41238 Y_RNA.567-201ENST00000384736 106 ntBASIC0.5□□□□□ -2.33
APOBEC1P41238 MIR489-201ENST00000384923 84 ntBASIC0.5□□□□□ -2.33
APOBEC1P41238 RNU6-1307P-201ENST00000391012 103 ntBASIC0.5□□□□□ -2.33
APOBEC1P41238 RN7SKP12-201ENST00000516275 143 ntBASIC0.5□□□□□ -2.33
APOBEC1P41238 MIR376B-201ENST00000614515 100 ntBASIC0.5□□□□□ -2.33
APOBEC1P41238 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
APOBEC1P41238 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
APOBEC1P41238 Y_RNA.71-201ENST00000362892 104 ntBASIC0.49□□□□□ -2.33
APOBEC1P41238 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
APOBEC1P41238 RNU4-67P-201ENST00000364569 141 ntBASIC0.49□□□□□ -2.33
APOBEC1P41238 Y_RNA.360-201ENST00000365512 102 ntBASIC0.49□□□□□ -2.33
APOBEC1P41238 SNORD38.2-201ENST00000384470 69 ntBASIC0.49□□□□□ -2.33
APOBEC1P41238 Y_RNA.507-201ENST00000384500 99 ntBASIC0.49□□□□□ -2.33
APOBEC1P41238 MIR598-201ENST00000384868 97 ntBASIC0.49□□□□□ -2.33
APOBEC1P41238 Y_RNA.712-201ENST00000517011 92 ntBASIC0.49□□□□□ -2.33
APOBEC1P41238 AC138869.1-201ENST00000568623 124 ntBASIC0.49□□□□□ -2.33
APOBEC1P41238 MIR1255B1-201ENST00000636325 63 ntBASIC0.49□□□□□ -2.33
APOBEC1P41238 RNU6-363P-201ENST00000362895 105 ntBASIC0.48□□□□□ -2.33
APOBEC1P41238 Y_RNA.218-201ENST00000364218 104 ntBASIC0.48□□□□□ -2.33
APOBEC1P41238 MIR635-201ENST00000384830 98 ntBASIC0.48□□□□□ -2.33
APOBEC1P41238 MIR548I2-201ENST00000408348 149 ntBASIC0.48□□□□□ -2.33
APOBEC1P41238 SNORD71-201ENST00000411292 86 ntBASIC0.48□□□□□ -2.33
APOBEC1P41238 MIR4639-201ENST00000584938 69 ntBASIC0.48□□□□□ -2.33
APOBEC1P41238 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
APOBEC1P41238 U6.95-201ENST00000636931 70 ntBASIC0.48□□□□□ -2.33
APOBEC1P41238 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
APOBEC1P41238 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
APOBEC1P41238 RNA5SP245-201ENST00000364239 121 ntBASIC0.47□□□□□ -2.33
APOBEC1P41238 RNA5SP517-201ENST00000364724 117 ntBASIC0.47□□□□□ -2.33
APOBEC1P41238 Y_RNA.344-201ENST00000365381 112 ntBASIC0.47□□□□□ -2.33
APOBEC1P41238 SNORA7.5-201ENST00000410672 110 ntBASIC0.47□□□□□ -2.33
APOBEC1P41238 SNORA40.8-201ENST00000411034 126 ntBASIC0.47□□□□□ -2.33
APOBEC1P41238 TMSB4XP3-201ENST00000445144 114 ntBASIC0.47□□□□□ -2.33
APOBEC1P41238 RNU6-659P-201ENST00000516454 104 ntBASIC0.47□□□□□ -2.33
APOBEC1P41238 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.47□□□□□ -2.33
APOBEC1P41238 MIR3914-2-201ENST00000637339 95 ntBASIC0.47□□□□□ -2.33
APOBEC1P41238 SNORA63.5-201ENST00000363548 123 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 Y_RNA.155-201ENST00000363632 101 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 SNORD116-14-201ENST00000383894 92 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 SNORD116-17-201ENST00000383929 92 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 RNU6-409P-201ENST00000384114 104 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 SNORD116-15-201ENST00000384445 92 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 Y_RNA.525-201ENST00000384570 113 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 SNORD116-19-201ENST00000384729 92 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 MIR34C-201ENST00000384831 77 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 BX276092.1-201ENST00000427368 251 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 AC092628.1-201ENST00000436250 252 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 RPL39P34-201ENST00000477141 156 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 AL512310.12-203ENST00000640543 90 ntBASIC0.46□□□□□ -2.34
APOBEC1P41238 Y_RNA.362-201ENST00000365518 110 ntBASIC0.45□□□□□ -2.34
APOBEC1P41238 SNORA8.2-201ENST00000384372 139 ntBASIC0.45□□□□□ -2.34
APOBEC1P41238 RNU6-959P-201ENST00000384671 107 ntBASIC0.45□□□□□ -2.34
APOBEC1P41238 SNORD28-201ENST00000384706 75 ntBASIC0.45□□□□□ -2.34
APOBEC1P41238 Y_RNA.649-201ENST00000459077 103 ntBASIC0.45□□□□□ -2.34
APOBEC1P41238 RNU6-1018P-201ENST00000516577 106 ntBASIC0.45□□□□□ -2.34
APOBEC1P41238 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
APOBEC1P41238 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
APOBEC1P41238 MIR518A1-201ENST00000385068 85 ntBASIC0.44□□□□□ -2.34
APOBEC1P41238 MIR1912-201ENST00000410389 80 ntBASIC0.44□□□□□ -2.34
APOBEC1P41238 AC244505.6-201ENST00000452829 130 ntBASIC0.44□□□□□ -2.34
APOBEC1P41238 RNA5SP268-201ENST00000516828 124 ntBASIC0.44□□□□□ -2.34
APOBEC1P41238 SCARNA16.5-201ENST00000517114 183 ntBASIC0.44□□□□□ -2.34
APOBEC1P41238 RNA5SP47-201ENST00000517230 109 ntBASIC0.44□□□□□ -2.34
APOBEC1P41238 AC007012.1-201ENST00000567192 175 ntBASIC0.44□□□□□ -2.34
APOBEC1P41238 MIR4679-2-201ENST00000578358 77 ntBASIC0.44□□□□□ -2.34
APOBEC1P41238 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
APOBEC1P41238 AL162726.3-218ENST00000636401 95 ntBASIC0.44□□□□□ -2.34
APOBEC1P41238 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.44□□□□□ -2.34
APOBEC1P41238 RNU6-1313P-201ENST00000362622 102 ntBASIC0.43□□□□□ -2.34
APOBEC1P41238 Y_RNA.85-201ENST00000363014 111 ntBASIC0.43□□□□□ -2.34
APOBEC1P41238 SNORA36.1-201ENST00000363424 132 ntBASIC0.43□□□□□ -2.34
APOBEC1P41238 RNU6-81P-201ENST00000365608 104 ntBASIC0.43□□□□□ -2.34
APOBEC1P41238 RNU6-571P-201ENST00000384128 107 ntBASIC0.43□□□□□ -2.34
APOBEC1P41238 MIR548A3-201ENST00000385297 97 ntBASIC0.43□□□□□ -2.34
APOBEC1P41238 RNU6-816P-201ENST00000390914 107 ntBASIC0.43□□□□□ -2.34
APOBEC1P41238 RNU6-1268P-201ENST00000391214 107 ntBASIC0.43□□□□□ -2.34
APOBEC1P41238 RNU6-1239P-201ENST00000391310 107 ntBASIC0.43□□□□□ -2.34
APOBEC1P41238 SUMO1P3-201ENST00000439961 304 ntBASIC0.43□□□□□ -2.34
APOBEC1P41238 MTND5P40-201ENST00000559945 246 ntBASIC0.43□□□□□ -2.34
APOBEC1P41238 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.43□□□□□ -2.34
APOBEC1P41238 AC244669.1-204ENST00000621564 178 ntBASIC0.43□□□□□ -2.34
APOBEC1P41238 MIR6828-201ENST00000636181 60 ntBASIC0.43□□□□□ -2.34
APOBEC1P41238 Y_RNA.36-201ENST00000362602 112 ntBASIC0.42□□□□□ -2.34
APOBEC1P41238 Y_RNA.49-201ENST00000362714 112 ntBASIC0.42□□□□□ -2.34
APOBEC1P41238 SNORD115-24-201ENST00000363528 82 ntBASIC0.42□□□□□ -2.34
APOBEC1P41238 SNORD118-201ENST00000363593 134 ntBASIC0.42□□□□□ -2.34
APOBEC1P41238 RNA5SP499-201ENST00000363982 119 ntBASIC0.42□□□□□ -2.34
APOBEC1P41238 Y_RNA.309-201ENST00000365046 111 ntBASIC0.42□□□□□ -2.34
APOBEC1P41238 MIR216A-201ENST00000385063 110 ntBASIC0.42□□□□□ -2.34
APOBEC1P41238 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
APOBEC1P41238 TRAJ51-201ENST00000504127 63 ntBASIC0.42□□□□□ -2.34
APOBEC1P41238 RNU6-1333P-201ENST00000516162 93 ntBASIC0.42□□□□□ -2.34
APOBEC1P41238 RNA5SP227-201ENST00000516184 113 ntBASIC0.42□□□□□ -2.34
APOBEC1P41238 SNORA25.18-201ENST00000607153 114 ntBASIC0.42□□□□□ -2.34
APOBEC1P41238 MIR6513-201ENST00000621188 64 ntBASIC0.42□□□□□ -2.34
APOBEC1P41238 AC091304.10-201ENST00000641554 121 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms