Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU7-137P-201ENST00000516788 62 ntBASIC0.26□□□□□ -2.37
CCDC71LQ8N9Z2 AL359881.1-201ENST00000602916 267 ntBASIC0.26□□□□□ -2.37
CCDC71LQ8N9Z2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.26□□□□□ -2.37
CCDC71LQ8N9Z2 RNU4-58P-201ENST00000363192 141 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 SNORA36.1-201ENST00000363424 132 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.785-201ENST00000384290 109 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 RNU6-1135P-201ENST00000411083 103 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 MIR1270-201ENST00000459320 83 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.700-201ENST00000516806 100 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 AC022523.2-201ENST00000561045 150 ntBASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.25□□□□□ -2.37
CCDC71LQ8N9Z2 MIR101-2-201ENST00000362195 79 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 SNORD44.1-201ENST00000363202 61 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 SNORD118-201ENST00000363593 134 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.298-201ENST00000364960 107 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 RNU6-1130P-201ENST00000365434 107 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 AL603914.1-201ENST00000401964 204 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 RNU4-69P-201ENST00000410677 143 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 SUMO1P3-201ENST00000439961 304 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 RNA5SP268-201ENST00000516828 124 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 AC138749.4-201ENST00000563970 127 ntBASIC0.24□□□□□ -2.37
CCDC71LQ8N9Z2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 MIR330-201ENST00000362196 94 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.119-201ENST00000363301 96 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 SNORD114-10-201ENST00000363409 72 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.205-201ENST00000364128 113 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 RNA5SP245-201ENST00000364239 121 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 RNU7-197P-201ENST00000458836 62 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 AC108081.1-201ENST00000604358 221 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 AL137067.1-201ENST00000615933 120 ntBASIC0.23□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.8-201ENST00000362353 102 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 SNORA63.5-201ENST00000363548 123 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 RNA5SP457-201ENST00000363657 124 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.299-201ENST00000364973 94 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 RNU6-449P-201ENST00000383914 107 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 SNORD116-18-201ENST00000383961 92 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 RNU6-460P-201ENST00000391158 108 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 PCNPP3-201ENST00000393579 471 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 SNRPGP12-201ENST00000449481 213 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 RNA5SP227-201ENST00000516184 113 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 SNORA62.5-201ENST00000516634 120 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 RNY4P20-201ENST00000516678 93 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 Y_RNA.778-201ENST00000620203 90 ntBASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
CCDC71LQ8N9Z2 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-915P-201ENST00000364943 103 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-804P-201ENST00000384286 107 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 MIRLET7F2-201ENST00000385277 83 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 MIR513C-201ENST00000401352 84 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-394P-201ENST00000410735 107 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-135P-201ENST00000516769 101 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-182P-201ENST00000516970 105 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 MIR8087-201ENST00000612745 78 ntBASIC0.21□□□□□ -2.38
CCDC71LQ8N9Z2 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 SNORD28-201ENST00000384706 75 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-1104P-201ENST00000384723 104 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-1321P-201ENST00000390905 107 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.580-201ENST00000391004 95 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 SNORD77B-201ENST00000391112 67 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 RNA5SP47-201ENST00000517230 109 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 IGKV1-22-201ENST00000524313 326 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 AC098479.1-201ENST00000609225 154 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 AC090425.1-201ENST00000610007 140 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 MIR7107-201ENST00000611489 80 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 FTX_2.1-201ENST00000618816 94 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 AC244669.1-204ENST00000621564 178 ntBASIC0.2□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.49-201ENST00000362714 112 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.85-201ENST00000363014 111 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.150-201ENST00000363562 102 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 RNY1P2-201ENST00000364820 117 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.398-201ENST00000383952 99 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.448-201ENST00000384185 108 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 MIR206-201ENST00000384872 86 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-1307P-201ENST00000391012 103 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 AC069271.1-201ENST00000445577 156 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 MIR4639-201ENST00000584938 69 ntBASIC0.19□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.270-201ENST00000364693 104 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-886P-201ENST00000384319 105 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 MT-TI-201ENST00000387365 69 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 RNU2-59P-201ENST00000410482 191 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 AC073261.1-201ENST00000429409 121 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 RNU7-48P-201ENST00000458875 63 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.692-201ENST00000516627 105 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 MTND5P41-201ENST00000517498 206 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 MIR3144-201ENST00000579460 79 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 MIR4500-201ENST00000579472 76 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 MIR3121-201ENST00000579680 77 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 AC023932.2-201ENST00000603176 175 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 MIR6828-201ENST00000636181 60 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 AC091304.10-201ENST00000641554 121 ntBASIC0.18□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.56-201ENST00000362798 112 ntBASIC0.17□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.294-201ENST00000364916 102 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms