Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SNORA25.12-201ENST00000516202 82 ntBASIC0.34□□□□□ -2.36
CCDC71Q8IV32 SNORA25.16-201ENST00000516741 121 ntBASIC0.34□□□□□ -2.36
CCDC71Q8IV32 RNU6-135P-201ENST00000516769 101 ntBASIC0.34□□□□□ -2.36
CCDC71Q8IV32 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.34□□□□□ -2.36
CCDC71Q8IV32 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
CCDC71Q8IV32 Y_RNA.298-201ENST00000364960 107 ntBASIC0.33□□□□□ -2.36
CCDC71Q8IV32 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
CCDC71Q8IV32 RNU4-69P-201ENST00000410677 143 ntBASIC0.33□□□□□ -2.36
CCDC71Q8IV32 RNU6-394P-201ENST00000410735 107 ntBASIC0.33□□□□□ -2.36
CCDC71Q8IV32 RNU7-123P-201ENST00000515911 60 ntBASIC0.33□□□□□ -2.36
CCDC71Q8IV32 Y_RNA.697-201ENST00000516776 113 ntBASIC0.33□□□□□ -2.36
CCDC71Q8IV32 RNU7-137P-201ENST00000516788 62 ntBASIC0.33□□□□□ -2.36
CCDC71Q8IV32 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.33□□□□□ -2.36
CCDC71Q8IV32 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 Y_RNA.32-201ENST00000362589 110 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 RNU4-58P-201ENST00000363192 141 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 RNU6-508P-201ENST00000363231 103 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 RNU4-11P-201ENST00000365287 132 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 Y_RNA.366-201ENST00000365540 102 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 RNU6-449P-201ENST00000383914 107 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 SNORA8.2-201ENST00000384372 139 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 RNU6-291P-201ENST00000384720 107 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 RNU6-535P-201ENST00000384722 107 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 Y_RNA.567-201ENST00000384736 106 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 MIR644A-201ENST00000385262 94 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 SNORD71-201ENST00000411292 86 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 RNU7-197P-201ENST00000458836 62 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 AC074198.2-201ENST00000508153 258 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 Y_RNA.686-201ENST00000516548 134 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 SNORD67.1-201ENST00000516618 108 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 SNORA31.14-201ENST00000516728 116 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 Y_RNA.778-201ENST00000620203 90 ntBASIC0.32□□□□□ -2.36
CCDC71Q8IV32 RNA5SP133-201ENST00000363368 119 ntBASIC0.31□□□□□ -2.36
CCDC71Q8IV32 SNORD118-201ENST00000363593 134 ntBASIC0.31□□□□□ -2.36
CCDC71Q8IV32 RNU6-151P-201ENST00000364158 107 ntBASIC0.31□□□□□ -2.36
CCDC71Q8IV32 Y_RNA.433-201ENST00000384089 102 ntBASIC0.31□□□□□ -2.36
CCDC71Q8IV32 RNU6-531P-201ENST00000516694 104 ntBASIC0.31□□□□□ -2.36
CCDC71Q8IV32 DEFB131E-201ENST00000532329 154 ntBASIC0.31□□□□□ -2.36
CCDC71Q8IV32 MTND5P34-201ENST00000568888 325 ntBASIC0.31□□□□□ -2.36
CCDC71Q8IV32 AL359881.1-201ENST00000602916 267 ntBASIC0.31□□□□□ -2.36
CCDC71Q8IV32 AC098479.1-201ENST00000609225 154 ntBASIC0.31□□□□□ -2.36
CCDC71Q8IV32 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CCDC71Q8IV32 SNORD44.1-201ENST00000363202 61 ntBASIC0.3□□□□□ -2.36
CCDC71Q8IV32 SNORA36.1-201ENST00000363424 132 ntBASIC0.3□□□□□ -2.36
CCDC71Q8IV32 Y_RNA.280-201ENST00000364765 112 ntBASIC0.3□□□□□ -2.36
CCDC71Q8IV32 RNY1P2-201ENST00000364820 117 ntBASIC0.3□□□□□ -2.36
CCDC71Q8IV32 MIR1270-201ENST00000459320 83 ntBASIC0.3□□□□□ -2.36
CCDC71Q8IV32 AC138749.4-201ENST00000563970 127 ntBASIC0.3□□□□□ -2.36
CCDC71Q8IV32 MIR3121-201ENST00000579680 77 ntBASIC0.3□□□□□ -2.36
CCDC71Q8IV32 AL137067.1-201ENST00000615933 120 ntBASIC0.3□□□□□ -2.36
CCDC71Q8IV32 U6.109-201ENST00000636749 87 ntBASIC0.3□□□□□ -2.36
CCDC71Q8IV32 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.3□□□□□ -2.36
CCDC71Q8IV32 MIRLET7F2-201ENST00000385277 83 ntBASIC0.29□□□□□ -2.36
CCDC71Q8IV32 RNU6-863P-201ENST00000515989 104 ntBASIC0.29□□□□□ -2.36
CCDC71Q8IV32 AC022523.2-201ENST00000561045 150 ntBASIC0.29□□□□□ -2.36
CCDC71Q8IV32 MIR2909-201ENST00000617113 69 ntBASIC0.29□□□□□ -2.36
CCDC71Q8IV32 MIR6828-201ENST00000636181 60 ntBASIC0.29□□□□□ -2.36
CCDC71Q8IV32 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.29□□□□□ -2.36
CCDC71Q8IV32 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.29□□□□□ -2.36
CCDC71Q8IV32 Y_RNA.119-201ENST00000363301 96 ntBASIC0.28□□□□□ -2.36
CCDC71Q8IV32 RNU6-1130P-201ENST00000365434 107 ntBASIC0.28□□□□□ -2.36
CCDC71Q8IV32 SNORD28-201ENST00000384706 75 ntBASIC0.28□□□□□ -2.36
CCDC71Q8IV32 SNORD77B-201ENST00000391112 67 ntBASIC0.28□□□□□ -2.36
CCDC71Q8IV32 Y_RNA.692-201ENST00000516627 105 ntBASIC0.28□□□□□ -2.36
CCDC71Q8IV32 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.28□□□□□ -2.36
CCDC71Q8IV32 MIR4639-201ENST00000584938 69 ntBASIC0.28□□□□□ -2.36
CCDC71Q8IV32 FTX_2.1-201ENST00000618816 94 ntBASIC0.28□□□□□ -2.36
CCDC71Q8IV32 MIR101-2-201ENST00000362195 79 ntBASIC0.27□□□□□ -2.37
CCDC71Q8IV32 Y_RNA.56-201ENST00000362798 112 ntBASIC0.27□□□□□ -2.37
CCDC71Q8IV32 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
CCDC71Q8IV32 RNU6-886P-201ENST00000384319 105 ntBASIC0.27□□□□□ -2.37
CCDC71Q8IV32 RNU6-429P-201ENST00000384582 108 ntBASIC0.27□□□□□ -2.37
CCDC71Q8IV32 MIR513C-201ENST00000401352 84 ntBASIC0.27□□□□□ -2.37
CCDC71Q8IV32 RNU5E-3P-201ENST00000515913 68 ntBASIC0.27□□□□□ -2.37
CCDC71Q8IV32 RNA5SP268-201ENST00000516828 124 ntBASIC0.27□□□□□ -2.37
CCDC71Q8IV32 RNA5SP47-201ENST00000517230 109 ntBASIC0.27□□□□□ -2.37
CCDC71Q8IV32 MIR3144-201ENST00000579460 79 ntBASIC0.27□□□□□ -2.37
CCDC71Q8IV32 AC108081.1-201ENST00000604358 221 ntBASIC0.27□□□□□ -2.37
CCDC71Q8IV32 SNORA25.18-201ENST00000607153 114 ntBASIC0.27□□□□□ -2.37
CCDC71Q8IV32 AP001340.1-201ENST00000624405 217 ntBASIC0.27□□□□□ -2.37
CCDC71Q8IV32 RNU6-1229P-201ENST00000364295 107 ntBASIC0.26□□□□□ -2.37
CCDC71Q8IV32 Y_RNA.270-201ENST00000364693 104 ntBASIC0.26□□□□□ -2.37
CCDC71Q8IV32 SNORD116-18-201ENST00000383961 92 ntBASIC0.26□□□□□ -2.37
CCDC71Q8IV32 RNU6-460P-201ENST00000391158 108 ntBASIC0.26□□□□□ -2.37
CCDC71Q8IV32 RNA5SP63-201ENST00000391225 112 ntBASIC0.26□□□□□ -2.37
CCDC71Q8IV32 PCNPP3-201ENST00000393579 471 ntBASIC0.26□□□□□ -2.37
CCDC71Q8IV32 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
CCDC71Q8IV32 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
CCDC71Q8IV32 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
CCDC71Q8IV32 RNY4P20-201ENST00000516678 93 ntBASIC0.26□□□□□ -2.37
CCDC71Q8IV32 SCARNA16.5-201ENST00000517114 183 ntBASIC0.26□□□□□ -2.37
CCDC71Q8IV32 RNU6-794P-201ENST00000517261 64 ntBASIC0.26□□□□□ -2.37
CCDC71Q8IV32 AC105081.1-201ENST00000617727 106 ntBASIC0.26□□□□□ -2.37
CCDC71Q8IV32 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
CCDC71Q8IV32 RNU6-1099P-201ENST00000363533 107 ntBASIC0.25□□□□□ -2.37
CCDC71Q8IV32 RNU6-915P-201ENST00000364943 103 ntBASIC0.25□□□□□ -2.37
CCDC71Q8IV32 RNU6-1104P-201ENST00000384723 104 ntBASIC0.25□□□□□ -2.37
CCDC71Q8IV32 RNU2-59P-201ENST00000410482 191 ntBASIC0.25□□□□□ -2.37
CCDC71Q8IV32 RNA5SP395-201ENST00000516567 118 ntBASIC0.25□□□□□ -2.37
CCDC71Q8IV32 MIR548X2-201ENST00000579776 100 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms