Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.84□□□□□ -2.7
TCRBV3S1A0A5B6 MIR216B-201ENST00000390186 82 ntBASIC-1.84□□□□□ -2.7
TCRBV3S1A0A5B6 HLA-S-202ENST00000425174 53 ntBASIC-1.84□□□□□ -2.7
TCRBV3S1A0A5B6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.84□□□□□ -2.7
TCRBV3S1A0A5B6 RNU2-35P-201ENST00000516446 142 ntBASIC-1.84□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.84□□□□□ -2.7
TCRBV3S1A0A5B6 AC068339.1-201ENST00000526965 141 ntBASIC-1.84□□□□□ -2.7
TCRBV3S1A0A5B6 MIR4464-201ENST00000580818 92 ntBASIC-1.84□□□□□ -2.7
TCRBV3S1A0A5B6 AC119751.7-201ENST00000600494 245 ntBASIC-1.84□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-259P-201ENST00000383999 107 ntBASIC-1.85□□□□□ -2.71
TCRBV3S1A0A5B6 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.85□□□□□ -2.71
TCRBV3S1A0A5B6 DEFB108C-201ENST00000400154 252 ntBASIC-1.85□□□□□ -2.71
TCRBV3S1A0A5B6 RNU7-2P-201ENST00000516096 62 ntBASIC-1.85□□□□□ -2.71
TCRBV3S1A0A5B6 MIR6818-201ENST00000621576 65 ntBASIC-1.85□□□□□ -2.71
TCRBV3S1A0A5B6 AP000720.1-201ENST00000625091 483 ntBASIC-1.85□□□□□ -2.71
TCRBV3S1A0A5B6 RNA5SP266-201ENST00000410273 108 ntBASIC-1.86□□□□□ -2.71
TCRBV3S1A0A5B6 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.86□□□□□ -2.71
TCRBV3S1A0A5B6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.86□□□□□ -2.71
TCRBV3S1A0A5B6 VN1R91P-201ENST00000594377 169 ntBASIC-1.86□□□□□ -2.71
TCRBV3S1A0A5B6 SNORD36A-201ENST00000362874 73 ntBASIC-1.87□□□□□ -2.71
TCRBV3S1A0A5B6 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.87□□□□□ -2.71
TCRBV3S1A0A5B6 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.87□□□□□ -2.71
TCRBV3S1A0A5B6 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.87□□□□□ -2.71
TCRBV3S1A0A5B6 MIR527-201ENST00000385244 85 ntBASIC-1.87□□□□□ -2.71
TCRBV3S1A0A5B6 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.87□□□□□ -2.71
TCRBV3S1A0A5B6 RNU4-69P-201ENST00000410677 143 ntBASIC-1.87□□□□□ -2.71
TCRBV3S1A0A5B6 MIR5591-201ENST00000578248 65 ntBASIC-1.87□□□□□ -2.71
TCRBV3S1A0A5B6 SNORD114-4-201ENST00000363962 75 ntBASIC-1.88□□□□□ -2.71
TCRBV3S1A0A5B6 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.88□□□□□ -2.71
TCRBV3S1A0A5B6 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.88□□□□□ -2.71
TCRBV3S1A0A5B6 AC107399.1-201ENST00000451226 265 ntBASIC-1.88□□□□□ -2.71
TCRBV3S1A0A5B6 SNORD42B-201ENST00000458893 67 ntBASIC-1.88□□□□□ -2.71
TCRBV3S1A0A5B6 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.88□□□□□ -2.71
TCRBV3S1A0A5B6 RNU6-208P-201ENST00000362431 107 ntBASIC-1.89□□□□□ -2.71
TCRBV3S1A0A5B6 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.89□□□□□ -2.71
TCRBV3S1A0A5B6 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.89□□□□□ -2.71
TCRBV3S1A0A5B6 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.89□□□□□ -2.71
TCRBV3S1A0A5B6 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.89□□□□□ -2.71
TCRBV3S1A0A5B6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.89□□□□□ -2.71
TCRBV3S1A0A5B6 YWHAEP3-201ENST00000582767 121 ntBASIC-1.89□□□□□ -2.71
TCRBV3S1A0A5B6 AC015540.1-201ENST00000615828 501 ntBASIC-1.89□□□□□ -2.71
TCRBV3S1A0A5B6 AC022079.1-201ENST00000621546 602 ntBASIC-1.89□□□□□ -2.71
TCRBV3S1A0A5B6 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 RNU6-957P-201ENST00000363652 99 ntBASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 RNU6-746P-201ENST00000384112 109 ntBASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 RNU6-576P-201ENST00000390854 102 ntBASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 MIR889-201ENST00000401280 79 ntBASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 AL606845.1-201ENST00000404881 255 ntBASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 AL731563.1-201ENST00000442202 214 ntBASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 RNA5SP180-201ENST00000516181 101 ntBASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 MIR4770-201ENST00000579149 58 ntBASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 snoU18.1-201ENST00000629629 71 ntBASIC-1.9□□□□□ -2.71
TCRBV3S1A0A5B6 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.91□□□□□ -2.72
TCRBV3S1A0A5B6 SNORD27-201ENST00000363981 72 ntBASIC-1.91□□□□□ -2.72
TCRBV3S1A0A5B6 RNU6-728P-201ENST00000365375 104 ntBASIC-1.91□□□□□ -2.72
TCRBV3S1A0A5B6 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.91□□□□□ -2.72
TCRBV3S1A0A5B6 RNU6-561P-201ENST00000516222 102 ntBASIC-1.91□□□□□ -2.72
TCRBV3S1A0A5B6 RNU6-453P-201ENST00000516819 85 ntBASIC-1.91□□□□□ -2.72
TCRBV3S1A0A5B6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.91□□□□□ -2.72
TCRBV3S1A0A5B6 MIR4696-201ENST00000581431 70 ntBASIC-1.91□□□□□ -2.72
TCRBV3S1A0A5B6 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.92□□□□□ -2.72
TCRBV3S1A0A5B6 RNU6-102P-201ENST00000384485 104 ntBASIC-1.92□□□□□ -2.72
TCRBV3S1A0A5B6 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.92□□□□□ -2.72
TCRBV3S1A0A5B6 RNU6-310P-201ENST00000384655 107 ntBASIC-1.92□□□□□ -2.72
TCRBV3S1A0A5B6 MIR34C-201ENST00000384831 77 ntBASIC-1.92□□□□□ -2.72
TCRBV3S1A0A5B6 MIR624-201ENST00000385217 97 ntBASIC-1.92□□□□□ -2.72
TCRBV3S1A0A5B6 RNU6-243P-201ENST00000391140 107 ntBASIC-1.92□□□□□ -2.72
TCRBV3S1A0A5B6 HSPE1P25-201ENST00000455484 251 ntBASIC-1.92□□□□□ -2.72
TCRBV3S1A0A5B6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.92□□□□□ -2.72
TCRBV3S1A0A5B6 SNORD63.1-201ENST00000516178 80 ntBASIC-1.92□□□□□ -2.72
TCRBV3S1A0A5B6 AL445584.3-201ENST00000617173 78 ntBASIC-1.92□□□□□ -2.72
TCRBV3S1A0A5B6 MIR6888-201ENST00000621977 67 ntBASIC-1.92□□□□□ -2.72
TCRBV3S1A0A5B6 RNU6-235P-201ENST00000362644 107 ntBASIC-1.93□□□□□ -2.72
TCRBV3S1A0A5B6 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.93□□□□□ -2.72
TCRBV3S1A0A5B6 RNU6-890P-201ENST00000384121 107 ntBASIC-1.93□□□□□ -2.72
TCRBV3S1A0A5B6 RNU6-662P-201ENST00000384253 104 ntBASIC-1.93□□□□□ -2.72
TCRBV3S1A0A5B6 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.93□□□□□ -2.72
TCRBV3S1A0A5B6 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.93□□□□□ -2.72
TCRBV3S1A0A5B6 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.93□□□□□ -2.72
TCRBV3S1A0A5B6 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.93□□□□□ -2.72
TCRBV3S1A0A5B6 AC006362.1-201ENST00000567392 174 ntBASIC-1.93□□□□□ -2.72
TCRBV3S1A0A5B6 MIR4308-201ENST00000580634 81 ntBASIC-1.93□□□□□ -2.72
TCRBV3S1A0A5B6 AL353803.5-201ENST00000599815 141 ntBASIC-1.93□□□□□ -2.72
TCRBV3S1A0A5B6 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.94□□□□□ -2.72
TCRBV3S1A0A5B6 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.94□□□□□ -2.72
TCRBV3S1A0A5B6 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.94□□□□□ -2.72
TCRBV3S1A0A5B6 SNORD101-201ENST00000384027 73 ntBASIC-1.94□□□□□ -2.72
TCRBV3S1A0A5B6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
TCRBV3S1A0A5B6 RNU2-51P-201ENST00000410708 197 ntBASIC-1.94□□□□□ -2.72
TCRBV3S1A0A5B6 RNU4-61P-201ENST00000411243 107 ntBASIC-1.94□□□□□ -2.72
TCRBV3S1A0A5B6 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.94□□□□□ -2.72
TCRBV3S1A0A5B6 RNU6-559P-201ENST00000516151 98 ntBASIC-1.94□□□□□ -2.72
TCRBV3S1A0A5B6 RNA5SP476-201ENST00000516613 103 ntBASIC-1.94□□□□□ -2.72
TCRBV3S1A0A5B6 MIR6502-201ENST00000617296 76 ntBASIC-1.94□□□□□ -2.72
TCRBV3S1A0A5B6 AC048344.4-201ENST00000619744 527 ntBASIC-1.94□□□□□ -2.72
TCRBV3S1A0A5B6 MIR4272-201ENST00000635924 64 ntBASIC-1.94□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms