Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SENP3Q9H4L4 HDGFP1-201ENST00000405943 252 ntBASIC5.22□□□□□ -1.57
SENP3Q9H4L4 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.22□□□□□ -1.57
SENP3Q9H4L4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.22□□□□□ -1.57
SENP3Q9H4L4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SENP3Q9H4L4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SENP3Q9H4L4 MIR513A1-201ENST00000385138 129 ntBASIC5.21□□□□□ -1.58
SENP3Q9H4L4 AL133373.1-201ENST00000497098 94 ntBASIC5.21□□□□□ -1.58
SENP3Q9H4L4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SENP3Q9H4L4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SENP3Q9H4L4 SNORD115-24-201ENST00000363528 82 ntBASIC5.2□□□□□ -1.58
SENP3Q9H4L4 MIR3945-201ENST00000581853 98 ntBASIC5.2□□□□□ -1.58
SENP3Q9H4L4 RNU6-924P-201ENST00000362926 108 ntBASIC5.19□□□□□ -1.58
SENP3Q9H4L4 SNORA25.8-201ENST00000364831 128 ntBASIC5.19□□□□□ -1.58
SENP3Q9H4L4 SNORA15B-2-201ENST00000384058 135 ntBASIC5.19□□□□□ -1.58
SENP3Q9H4L4 SNORA15B-1-201ENST00000384334 135 ntBASIC5.19□□□□□ -1.58
SENP3Q9H4L4 SNORA31.17-201ENST00000516953 127 ntBASIC5.19□□□□□ -1.58
SENP3Q9H4L4 MIR7106-201ENST00000612419 65 ntBASIC5.19□□□□□ -1.58
SENP3Q9H4L4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.19□□□□□ -1.58
SENP3Q9H4L4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SENP3Q9H4L4 RNA5SP264-201ENST00000363115 107 ntBASIC5.18□□□□□ -1.58
SENP3Q9H4L4 SNORD17-201ENST00000390930 237 ntBASIC5.18□□□□□ -1.58
SENP3Q9H4L4 RNU6-172P-201ENST00000411000 93 ntBASIC5.18□□□□□ -1.58
SENP3Q9H4L4 CYCSP4-201ENST00000429682 331 ntBASIC5.18□□□□□ -1.58
SENP3Q9H4L4 RNA5SP103-201ENST00000459503 118 ntBASIC5.18□□□□□ -1.58
SENP3Q9H4L4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SENP3Q9H4L4 RNU6-934P-201ENST00000365154 107 ntBASIC5.17□□□□□ -1.58
SENP3Q9H4L4 MIR4771-2-201ENST00000577758 74 ntBASIC5.17□□□□□ -1.58
SENP3Q9H4L4 MIR4771-1-201ENST00000582617 74 ntBASIC5.17□□□□□ -1.58
SENP3Q9H4L4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SENP3Q9H4L4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SENP3Q9H4L4 RNU6-822P-201ENST00000362707 106 ntBASIC5.16□□□□□ -1.58
SENP3Q9H4L4 RNU1-148P-201ENST00000384472 162 ntBASIC5.16□□□□□ -1.58
SENP3Q9H4L4 SNORD105B-201ENST00000458770 79 ntBASIC5.16□□□□□ -1.58
SENP3Q9H4L4 RNU7-104P-201ENST00000459398 79 ntBASIC5.16□□□□□ -1.58
SENP3Q9H4L4 RNU7-161P-201ENST00000517289 62 ntBASIC5.16□□□□□ -1.58
SENP3Q9H4L4 CYP4A43P-201ENST00000568156 121 ntBASIC5.16□□□□□ -1.58
SENP3Q9H4L4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC5.16□□□□□ -1.58
SENP3Q9H4L4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SENP3Q9H4L4 RNA5SP100-201ENST00000410903 110 ntBASIC5.15□□□□□ -1.59
SENP3Q9H4L4 RNA5SP59-201ENST00000410922 110 ntBASIC5.15□□□□□ -1.59
SENP3Q9H4L4 UBBP3-201ENST00000445497 241 ntBASIC5.15□□□□□ -1.59
SENP3Q9H4L4 5S_rRNA.3-201ENST00000517021 110 ntBASIC5.15□□□□□ -1.59
SENP3Q9H4L4 GHRLOS.1-201ENST00000610995 70 ntBASIC5.15□□□□□ -1.59
SENP3Q9H4L4 5S_rRNA.19-201ENST00000612131 110 ntBASIC5.15□□□□□ -1.59
SENP3Q9H4L4 5S_rRNA.18-201ENST00000621941 110 ntBASIC5.15□□□□□ -1.59
SENP3Q9H4L4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SENP3Q9H4L4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SENP3Q9H4L4 RNA5SP424-201ENST00000390988 115 ntBASIC5.14□□□□□ -1.59
SENP3Q9H4L4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SENP3Q9H4L4 S100A11P2-201ENST00000467589 312 ntBASIC5.14□□□□□ -1.59
SENP3Q9H4L4 SNORD114-4-201ENST00000363962 75 ntBASIC5.13□□□□□ -1.59
SENP3Q9H4L4 MIR4635-201ENST00000583759 79 ntBASIC5.13□□□□□ -1.59
SENP3Q9H4L4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC5.13□□□□□ -1.59
SENP3Q9H4L4 AP000553.6-201ENST00000641242 118 ntBASIC5.13□□□□□ -1.59
SENP3Q9H4L4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.13□□□□□ -1.59
SENP3Q9H4L4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SENP3Q9H4L4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SENP3Q9H4L4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SENP3Q9H4L4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
SENP3Q9H4L4 U8.2-201ENST00000363156 134 ntBASIC5.12□□□□□ -1.59
SENP3Q9H4L4 MIR5680-201ENST00000577577 84 ntBASIC5.12□□□□□ -1.59
SENP3Q9H4L4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC5.12□□□□□ -1.59
SENP3Q9H4L4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SENP3Q9H4L4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.12□□□□□ -1.59
SENP3Q9H4L4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
SENP3Q9H4L4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.11□□□□□ -1.59
SENP3Q9H4L4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SENP3Q9H4L4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.11□□□□□ -1.59
SENP3Q9H4L4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC5.11□□□□□ -1.59
SENP3Q9H4L4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
SENP3Q9H4L4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SENP3Q9H4L4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
SENP3Q9H4L4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SENP3Q9H4L4 MIR527-201ENST00000385244 85 ntBASIC5.1□□□□□ -1.59
SENP3Q9H4L4 AC004552.1-201ENST00000419089 348 ntBASIC5.1□□□□□ -1.59
SENP3Q9H4L4 RPS26P3-201ENST00000470205 348 ntBASIC5.1□□□□□ -1.59
SENP3Q9H4L4 AC004057.1-201ENST00000485827 348 ntBASIC5.1□□□□□ -1.59
SENP3Q9H4L4 RPS26P15-201ENST00000488067 348 ntBASIC5.1□□□□□ -1.59
SENP3Q9H4L4 RN7SL633P-201ENST00000488974 297 ntBASIC5.1□□□□□ -1.59
SENP3Q9H4L4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SENP3Q9H4L4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SENP3Q9H4L4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SENP3Q9H4L4 Y_RNA.74-201ENST00000362911 99 ntBASIC5.09□□□□□ -1.59
SENP3Q9H4L4 RNU6-1204P-201ENST00000363948 107 ntBASIC5.09□□□□□ -1.59
SENP3Q9H4L4 IGKV2-26-201ENST00000518305 343 ntBASIC5.09□□□□□ -1.59
SENP3Q9H4L4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SENP3Q9H4L4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SENP3Q9H4L4 AL035425.3-201ENST00000564206 4996 ntBASIC5.08□□□□□ -1.6
SENP3Q9H4L4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SENP3Q9H4L4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
SENP3Q9H4L4 RN7SL20P-201ENST00000488827 297 ntBASIC5.08□□□□□ -1.6
SENP3Q9H4L4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SENP3Q9H4L4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SENP3Q9H4L4 MT-TY-201ENST00000387409 66 ntBASIC5.07□□□□□ -1.6
SENP3Q9H4L4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SENP3Q9H4L4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC5.06□□□□□ -1.6
SENP3Q9H4L4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SENP3Q9H4L4 SNORD1B-201ENST00000363091 84 ntBASIC5.06□□□□□ -1.6
SENP3Q9H4L4 RNU1-51P-201ENST00000365345 176 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 191.4 ms