Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-9Q9BYQ8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-9Q9BYQ8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 AC087190.4-201ENST00000574616 8334 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 MIR379-201ENST00000362218 67 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 Y_RNA.164-201ENST00000363709 102 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 SNORA5B-201ENST00000363786 132 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 SNORA80A-201ENST00000363922 136 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 Y_RNA.223-201ENST00000364290 113 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 MIR597-201ENST00000384968 97 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 AL691482.1-201ENST00000453255 87 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 RNVU1-2-201ENST00000516326 135 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 RNA5SP519-201ENST00000516480 119 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 MIR4639-201ENST00000584938 69 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 MIR8057-201ENST00000620957 69 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 MUC2-202ENST00000613187 4845 ntBASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP4-9Q9BYQ8 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 SPATA31D2P-201ENST00000429999 4388 ntBASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 MIR20A-201ENST00000362279 71 ntBASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 RNA5SP189-201ENST00000364920 115 ntBASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 RNU6-716P-201ENST00000365621 103 ntBASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 MIR29C-201ENST00000385231 88 ntBASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 COX5BP7-201ENST00000414780 274 ntBASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 RNU7-40P-201ENST00000516397 64 ntBASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 AL360157.1-201ENST00000565962 87 ntBASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 AC120024.2-201ENST00000576526 175 ntBASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 MIR7853-201ENST00000584820 132 ntBASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 AL353746.1-201ENST00000566293 6881 ntBASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-9Q9BYQ8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC1.4□□□□□ -2.18
KRTAP4-9Q9BYQ8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-9Q9BYQ8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
KRTAP4-9Q9BYQ8 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
KRTAP4-9Q9BYQ8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 RNU6-502P-201ENST00000362419 108 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 SNORA38.1-201ENST00000364172 131 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 SNORD113.3-201ENST00000364630 78 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 SNORA54-201ENST00000384281 123 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 RNU6-1340P-201ENST00000384438 107 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 SNORD96B-201ENST00000386148 79 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 SNORA49-201ENST00000386157 136 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 RNU1-119P-201ENST00000391122 165 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 RNA5SP120-201ENST00000410900 112 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 AL035423.1-201ENST00000420331 213 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 AC006210.1-201ENST00000424882 111 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 HLA-N-201ENST00000437516 135 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 JTBP1-201ENST00000441314 247 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 RN7SL601P-201ENST00000471221 293 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 RN7SL691P-201ENST00000494487 301 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 RNU6-732P-201ENST00000516033 103 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 RNU6-135P-201ENST00000516769 101 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 IGKV2-26-201ENST00000518305 343 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 AC026271.5-201ENST00000577873 130 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 AC091905.2-201ENST00000623143 306 ntBASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-9Q9BYQ8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-9Q9BYQ8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-9Q9BYQ8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 215.6 ms