Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRT40Q6A162 RNU6-1298P-201ENST00000362456 101 ntBASIC1.72□□□□□ -2.13
KRT40Q6A162 RNU6-342P-201ENST00000384521 104 ntBASIC1.72□□□□□ -2.13
KRT40Q6A162 RNA5SP261-201ENST00000410536 106 ntBASIC1.72□□□□□ -2.13
KRT40Q6A162 AL031737.1-201ENST00000450125 223 ntBASIC1.72□□□□□ -2.13
KRT40Q6A162 MIR8063-201ENST00000621930 81 ntBASIC1.72□□□□□ -2.13
KRT40Q6A162 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.72□□□□□ -2.13
KRT40Q6A162 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRT40Q6A162 Y_RNA.36-201ENST00000362602 112 ntBASIC1.71□□□□□ -2.14
KRT40Q6A162 SNORD1A-201ENST00000364968 72 ntBASIC1.71□□□□□ -2.14
KRT40Q6A162 Y_RNA.328-201ENST00000365208 113 ntBASIC1.71□□□□□ -2.14
KRT40Q6A162 MIR517C-201ENST00000385103 95 ntBASIC1.71□□□□□ -2.14
KRT40Q6A162 RNA5SP89-201ENST00000410300 108 ntBASIC1.71□□□□□ -2.14
KRT40Q6A162 SNORA19.1-201ENST00000410656 129 ntBASIC1.71□□□□□ -2.14
KRT40Q6A162 AL353813.1-201ENST00000440700 253 ntBASIC1.71□□□□□ -2.14
KRT40Q6A162 RNU6-893P-201ENST00000458841 100 ntBASIC1.71□□□□□ -2.14
KRT40Q6A162 AC023790.1-201ENST00000482174 347 ntBASIC1.71□□□□□ -2.14
KRT40Q6A162 GHRLOS.1-201ENST00000610995 70 ntBASIC1.71□□□□□ -2.14
KRT40Q6A162 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
KRT40Q6A162 AL162726.3-218ENST00000636401 95 ntBASIC1.71□□□□□ -2.14
KRT40Q6A162 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRT40Q6A162 Y_RNA.49-201ENST00000362714 112 ntBASIC1.7□□□□□ -2.14
KRT40Q6A162 SNORA32-201ENST00000384072 121 ntBASIC1.7□□□□□ -2.14
KRT40Q6A162 MIR30A-201ENST00000385092 71 ntBASIC1.7□□□□□ -2.14
KRT40Q6A162 SNORA67.6-201ENST00000391093 99 ntBASIC1.7□□□□□ -2.14
KRT40Q6A162 AC019176.1-201ENST00000518519 225 ntBASIC1.7□□□□□ -2.14
KRT40Q6A162 AC022709.1-201ENST00000615967 87 ntBASIC1.7□□□□□ -2.14
KRT40Q6A162 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
KRT40Q6A162 RNU6-766P-201ENST00000362478 107 ntBASIC1.69□□□□□ -2.14
KRT40Q6A162 RNA5SP48-201ENST00000363969 126 ntBASIC1.69□□□□□ -2.14
KRT40Q6A162 Y_RNA.299-201ENST00000364973 94 ntBASIC1.69□□□□□ -2.14
KRT40Q6A162 RNU6-616P-201ENST00000384353 107 ntBASIC1.69□□□□□ -2.14
KRT40Q6A162 HSPE1P24-201ENST00000450782 238 ntBASIC1.69□□□□□ -2.14
KRT40Q6A162 snoU13.9-201ENST00000458927 103 ntBASIC1.69□□□□□ -2.14
KRT40Q6A162 RNU6-168P-201ENST00000516189 101 ntBASIC1.69□□□□□ -2.14
KRT40Q6A162 AP003716.2-201ENST00000528260 108 ntBASIC1.69□□□□□ -2.14
KRT40Q6A162 PRELID3BP2-201ENST00000605362 201 ntBASIC1.69□□□□□ -2.14
KRT40Q6A162 PVT1_3.1-201ENST00000620853 95 ntBASIC1.69□□□□□ -2.14
KRT40Q6A162 SNORA25.3-201ENST00000363205 127 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 Y_RNA.205-201ENST00000364128 113 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 RNU6-756P-201ENST00000383997 107 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 Y_RNA.495-201ENST00000384435 112 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 RNU6-816P-201ENST00000390914 107 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 RNU6-1268P-201ENST00000391214 107 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 RNU6-1239P-201ENST00000391310 107 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 AC244023.1-201ENST00000426884 112 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 AL354695.1-201ENST00000427935 228 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 RNU6-165P-201ENST00000517170 99 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 RNU6-537P-201ENST00000517277 103 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 CYP3A52P-201ENST00000563326 91 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 AL357312.1-201ENST00000603879 298 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 AC242498.1-201ENST00000604134 111 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 ZNF209P-201ENST00000593450 2304 ntBASIC1.68□□□□□ -2.14
KRT40Q6A162 AP000648.3-201ENST00000623539 4507 ntBASIC1.67□□□□□ -2.14
KRT40Q6A162 Y_RNA.309-201ENST00000365046 111 ntBASIC1.67□□□□□ -2.14
KRT40Q6A162 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.67□□□□□ -2.14
KRT40Q6A162 AC245047.7-201ENST00000440265 293 ntBASIC1.67□□□□□ -2.14
KRT40Q6A162 AC027119.1-201ENST00000440877 241 ntBASIC1.67□□□□□ -2.14
KRT40Q6A162 RNU7-35P-201ENST00000517174 62 ntBASIC1.67□□□□□ -2.14
KRT40Q6A162 RNU6-32P-201ENST00000383948 107 ntBASIC1.66□□□□□ -2.14
KRT40Q6A162 SNORA51.5-201ENST00000384126 131 ntBASIC1.66□□□□□ -2.14
KRT40Q6A162 RNU6-13P-201ENST00000384248 107 ntBASIC1.66□□□□□ -2.14
KRT40Q6A162 SNORA18-201ENST00000384416 132 ntBASIC1.66□□□□□ -2.14
KRT40Q6A162 RNU6-12P-201ENST00000384604 107 ntBASIC1.66□□□□□ -2.14
KRT40Q6A162 RNU6-41P-201ENST00000384741 107 ntBASIC1.66□□□□□ -2.14
KRT40Q6A162 RNA5SP61-201ENST00000516453 100 ntBASIC1.66□□□□□ -2.14
KRT40Q6A162 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
KRT40Q6A162 AL353770.2-201ENST00000620024 78 ntBASIC1.66□□□□□ -2.14
KRT40Q6A162 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
KRT40Q6A162 RNU6-363P-201ENST00000362895 105 ntBASIC1.65□□□□□ -2.15
KRT40Q6A162 RNU4-67P-201ENST00000364569 141 ntBASIC1.65□□□□□ -2.15
KRT40Q6A162 MIR590-201ENST00000385008 97 ntBASIC1.65□□□□□ -2.15
KRT40Q6A162 RNU6-679P-201ENST00000391003 106 ntBASIC1.65□□□□□ -2.15
KRT40Q6A162 RNU6-1307P-201ENST00000391012 103 ntBASIC1.65□□□□□ -2.15
KRT40Q6A162 MIR1302-5-201ENST00000408164 150 ntBASIC1.65□□□□□ -2.15
KRT40Q6A162 MIR1912-201ENST00000410389 80 ntBASIC1.65□□□□□ -2.15
KRT40Q6A162 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.65□□□□□ -2.15
KRT40Q6A162 RPL39P25-201ENST00000449384 154 ntBASIC1.65□□□□□ -2.15
KRT40Q6A162 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRT40Q6A162 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
KRT40Q6A162 MIR605-201ENST00000385078 83 ntBASIC1.64□□□□□ -2.15
KRT40Q6A162 MIR1185-1-201ENST00000408598 86 ntBASIC1.64□□□□□ -2.15
KRT40Q6A162 RPS27P16-201ENST00000425758 201 ntBASIC1.64□□□□□ -2.15
KRT40Q6A162 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.64□□□□□ -2.15
KRT40Q6A162 AC079140.2-201ENST00000506193 142 ntBASIC1.64□□□□□ -2.15
KRT40Q6A162 RNU6-904P-201ENST00000516206 101 ntBASIC1.64□□□□□ -2.15
KRT40Q6A162 RNU6-947P-201ENST00000516264 106 ntBASIC1.64□□□□□ -2.15
KRT40Q6A162 RNU6-970P-201ENST00000516312 107 ntBASIC1.64□□□□□ -2.15
KRT40Q6A162 RNU6-109P-201ENST00000516364 107 ntBASIC1.64□□□□□ -2.15
KRT40Q6A162 RNU6-184P-201ENST00000516514 107 ntBASIC1.64□□□□□ -2.15
KRT40Q6A162 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.64□□□□□ -2.15
KRT40Q6A162 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
KRT40Q6A162 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRT40Q6A162 RNU6-640P-201ENST00000363693 105 ntBASIC1.63□□□□□ -2.15
KRT40Q6A162 Y_RNA.348-201ENST00000365403 103 ntBASIC1.63□□□□□ -2.15
KRT40Q6A162 RNU6-905P-201ENST00000384434 107 ntBASIC1.63□□□□□ -2.15
KRT40Q6A162 SNORD38B-201ENST00000384690 67 ntBASIC1.63□□□□□ -2.15
KRT40Q6A162 MIR3664-201ENST00000579074 99 ntBASIC1.63□□□□□ -2.15
KRT40Q6A162 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.63□□□□□ -2.15
KRT40Q6A162 SNORD38B-202ENST00000625943 69 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 323.6 ms