Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 RNU11-2P-201ENST00000516898 142 ntBASIC1.01□□□□□ -2.25
RTP3Q9BQQ7 MIR6516-201ENST00000630554 81 ntBASIC1.01□□□□□ -2.25
RTP3Q9BQQ7 AC008163.1-202ENST00000636004 2889 ntBASIC1.01□□□□□ -2.25
RTP3Q9BQQ7 RNU6-396P-201ENST00000365369 105 ntBASIC1□□□□□ -2.25
RTP3Q9BQQ7 Y_RNA.584-201ENST00000391090 114 ntBASIC1□□□□□ -2.25
RTP3Q9BQQ7 RNU6-1190P-201ENST00000410811 104 ntBASIC1□□□□□ -2.25
RTP3Q9BQQ7 AC063976.4-201ENST00000421971 163 ntBASIC1□□□□□ -2.25
RTP3Q9BQQ7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1□□□□□ -2.25
RTP3Q9BQQ7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1□□□□□ -2.25
RTP3Q9BQQ7 RNU6-654P-201ENST00000364373 107 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 Y_RNA.251-201ENST00000364551 99 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 MIR19B1-201ENST00000384829 87 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 RNU7-90P-201ENST00000459216 62 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 OR2A41P-201ENST00000473586 105 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 UBL5P1-201ENST00000507979 193 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 RNU6-255P-201ENST00000516957 105 ntBASIC0.99□□□□□ -2.25
RTP3Q9BQQ7 Y_RNA.170-201ENST00000363746 110 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 SNORA1.1-201ENST00000364671 133 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 Y_RNA.400-201ENST00000383963 111 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 RNU6-125P-201ENST00000384505 107 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 MRPL35P3-201ENST00000421557 364 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 RNA5SP236-201ENST00000516169 116 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 MIR2115-201ENST00000516657 100 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 RNU2-60P-201ENST00000517290 128 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 MIR6717-201ENST00000622747 73 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 Z97988.1-201ENST00000637697 135 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 AL391516.1-201ENST00000554380 2449 ntBASIC0.98□□□□□ -2.25
RTP3Q9BQQ7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 Y_RNA.215-201ENST00000364204 112 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORD18B-201ENST00000365659 72 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORA22-201ENST00000383907 134 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORA22C-201ENST00000384614 134 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORD38B-201ENST00000384690 67 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORA26.6-201ENST00000391256 115 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 MIR513C-201ENST00000401352 84 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 RNA5SP95-201ENST00000410319 137 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 AC244023.1-201ENST00000426884 112 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORA25.12-201ENST00000516202 82 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 Y_RNA.686-201ENST00000516548 134 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 RNU6-1212P-201ENST00000517023 104 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 MIR4661-201ENST00000582720 75 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 AC242498.1-201ENST00000604134 111 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 SNORD38B-202ENST00000625943 69 ntBASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.97□□□□□ -2.25
RTP3Q9BQQ7 RNU6-508P-201ENST00000363231 103 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU6-1319P-201ENST00000390855 104 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU6-747P-201ENST00000390928 104 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU6-241P-201ENST00000391148 104 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU6-460P-201ENST00000391158 108 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU6-613P-201ENST00000410412 108 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU6-177P-201ENST00000411257 104 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU7-197P-201ENST00000458836 62 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 RNU7-200P-201ENST00000516105 62 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 AC036111.3-201ENST00000526389 112 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 AC023827.1-201ENST00000569247 97 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 MIR548X2-201ENST00000579776 100 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 MIR3152-201ENST00000579801 74 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 MIR6513-201ENST00000621188 64 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 MIR924-201ENST00000638017 53 ntBASIC0.96□□□□□ -2.26
RTP3Q9BQQ7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.120-201ENST00000363304 110 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RNU6-309P-201ENST00000364573 106 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RNU4-16P-201ENST00000364737 141 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RNU6-205P-201ENST00000390858 107 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RNA5SP261-201ENST00000410536 106 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RNU6-602P-201ENST00000411155 105 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RPS3AP1-201ENST00000413190 320 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 MTATP6P21-201ENST00000440681 189 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 AC021613.1-201ENST00000623880 111 ntBASIC0.95□□□□□ -2.26
RTP3Q9BQQ7 RNU6-349P-201ENST00000362402 107 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.68-201ENST00000362881 102 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 RNY1P6-201ENST00000384193 109 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 SNORA20-201ENST00000384662 132 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 AC004941.2-201ENST00000427009 228 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 SNORD124-201ENST00000459577 104 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 RNA5SP272-201ENST00000516095 111 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 RNU6-346P-201ENST00000516288 111 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.681-201ENST00000516445 113 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.690-201ENST00000516603 95 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 MIR4714-201ENST00000580728 77 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 AP000753.3-201ENST00000604083 169 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 FAM71BP1-201ENST00000604431 523 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 AC106800.4-201ENST00000614905 153 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 AC010487.4-201ENST00000637027 61 ntBASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.115-201ENST00000363272 98 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 SNORD114-23-201ENST00000363536 72 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 SNORD113.3-201ENST00000364630 78 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 Y_RNA.488-201ENST00000384403 102 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 SNORA2B-201ENST00000384583 137 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 MIR569-201ENST00000385228 96 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 SNORD12C-201ENST00000386307 89 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 MT-TN-201ENST00000387400 73 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 AL603914.1-201ENST00000401964 204 ntBASIC0.93□□□□□ -2.26
RTP3Q9BQQ7 RNU5E-3P-201ENST00000515913 68 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 274.8 ms