Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MIR6717-201ENST00000622747 73 ntBASIC2.23□□□□□ -2.05
EPHB3P54753 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
EPHB3P54753 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
EPHB3P54753 AC080100.1-201ENST00000624239 5356 ntBASIC2.23□□□□□ -2.05
EPHB3P54753 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
EPHB3P54753 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
EPHB3P54753 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
EPHB3P54753 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
EPHB3P54753 SNORD115-35-201ENST00000365122 82 ntBASIC2.22□□□□□ -2.05
EPHB3P54753 RNU6-1276P-201ENST00000365372 104 ntBASIC2.22□□□□□ -2.05
EPHB3P54753 RNU6-972P-201ENST00000391208 107 ntBASIC2.22□□□□□ -2.05
EPHB3P54753 RNA5SP225-201ENST00000410874 135 ntBASIC2.22□□□□□ -2.05
EPHB3P54753 AL591806.2-201ENST00000433122 173 ntBASIC2.22□□□□□ -2.05
EPHB3P54753 RNU7-67P-201ENST00000459003 62 ntBASIC2.22□□□□□ -2.05
EPHB3P54753 RNU6-521P-201ENST00000516663 105 ntBASIC2.22□□□□□ -2.05
EPHB3P54753 RNU6-958P-201ENST00000516995 106 ntBASIC2.22□□□□□ -2.05
EPHB3P54753 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.22□□□□□ -2.05
EPHB3P54753 AL020996.3-201ENST00000606617 222 ntBASIC2.22□□□□□ -2.05
EPHB3P54753 AL137847.3-201ENST00000611521 109 ntBASIC2.22□□□□□ -2.05
EPHB3P54753 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.21□□□□□ -2.05
EPHB3P54753 Y_RNA.73-201ENST00000362910 113 ntBASIC2.21□□□□□ -2.06
EPHB3P54753 SNORA1.1-201ENST00000364671 133 ntBASIC2.21□□□□□ -2.06
EPHB3P54753 RNU6-979P-201ENST00000383896 107 ntBASIC2.21□□□□□ -2.06
EPHB3P54753 RNU6-242P-201ENST00000384359 107 ntBASIC2.21□□□□□ -2.06
EPHB3P54753 SNORD116-22-201ENST00000384430 92 ntBASIC2.21□□□□□ -2.06
EPHB3P54753 MIR1283-2-201ENST00000408621 87 ntBASIC2.21□□□□□ -2.06
EPHB3P54753 RNU6-1190P-201ENST00000410811 104 ntBASIC2.21□□□□□ -2.06
EPHB3P54753 RNU2-40P-201ENST00000410833 196 ntBASIC2.21□□□□□ -2.06
EPHB3P54753 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.21□□□□□ -2.06
EPHB3P54753 Y_RNA.659-201ENST00000515994 113 ntBASIC2.21□□□□□ -2.06
EPHB3P54753 AC121758.2-201ENST00000553271 193 ntBASIC2.21□□□□□ -2.06
EPHB3P54753 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.21□□□□□ -2.06
EPHB3P54753 MIR4529-201ENST00000578110 78 ntBASIC2.21□□□□□ -2.06
EPHB3P54753 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.21□□□□□ -2.06
EPHB3P54753 Y_RNA.190-201ENST00000363964 101 ntBASIC2.2□□□□□ -2.06
EPHB3P54753 RNU6-219P-201ENST00000364728 107 ntBASIC2.2□□□□□ -2.06
EPHB3P54753 Y_RNA.467-201ENST00000384297 102 ntBASIC2.2□□□□□ -2.06
EPHB3P54753 MIR597-201ENST00000384968 97 ntBASIC2.2□□□□□ -2.06
EPHB3P54753 RNU6-913P-201ENST00000390913 95 ntBASIC2.2□□□□□ -2.06
EPHB3P54753 RNU6-402P-201ENST00000410678 103 ntBASIC2.2□□□□□ -2.06
EPHB3P54753 RNU7-34P-201ENST00000459394 64 ntBASIC2.2□□□□□ -2.06
EPHB3P54753 RPL23AP42-201ENST00000471152 471 ntBASIC2.2□□□□□ -2.06
EPHB3P54753 RNU2-19P-201ENST00000517288 84 ntBASIC2.2□□□□□ -2.06
EPHB3P54753 MIR4769-201ENST00000584126 77 ntBASIC2.2□□□□□ -2.06
EPHB3P54753 AC096720.1-201ENST00000604441 183 ntBASIC2.2□□□□□ -2.06
EPHB3P54753 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.2□□□□□ -2.06
EPHB3P54753 AL513423.1-201ENST00000621695 132 ntBASIC2.2□□□□□ -2.06
EPHB3P54753 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
EPHB3P54753 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
EPHB3P54753 MIRLET7G-201ENST00000362280 84 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 RNU6-497P-201ENST00000365316 104 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 MIR518A2-201ENST00000384966 87 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 SNORD28B-201ENST00000390993 75 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 MIR1255A-201ENST00000408338 113 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 SNORD123-201ENST00000459473 70 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 AC055731.1-201ENST00000474387 401 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 AC108210.2-201ENST00000503681 201 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 AC108729.3-201ENST00000513484 108 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 AC015712.3-201ENST00000559380 164 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 MIR5588-201ENST00000581890 63 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 MIR548AR-201ENST00000582191 57 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 MIR4791-201ENST00000607666 84 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 AC243994.1-201ENST00000618627 109 ntBASIC2.19□□□□□ -2.06
EPHB3P54753 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
EPHB3P54753 AC131280.1-202ENST00000624067 4211 ntBASIC2.18□□□□□ -2.06
EPHB3P54753 SNORD116-10-201ENST00000363791 102 ntBASIC2.18□□□□□ -2.06
EPHB3P54753 RNU6-787P-201ENST00000384032 107 ntBASIC2.18□□□□□ -2.06
EPHB3P54753 RNU6-813P-201ENST00000384691 107 ntBASIC2.18□□□□□ -2.06
EPHB3P54753 MIR520A-201ENST00000384862 85 ntBASIC2.18□□□□□ -2.06
EPHB3P54753 MIR526A1-201ENST00000384897 85 ntBASIC2.18□□□□□ -2.06
EPHB3P54753 RNA5SP465-201ENST00000391195 109 ntBASIC2.18□□□□□ -2.06
EPHB3P54753 AC021506.2-201ENST00000612354 169 ntBASIC2.18□□□□□ -2.06
EPHB3P54753 AL512310.12-203ENST00000640543 90 ntBASIC2.18□□□□□ -2.06
EPHB3P54753 SNORA32-201ENST00000384072 121 ntBASIC2.17□□□□□ -2.06
EPHB3P54753 Y_RNA.537-201ENST00000384626 109 ntBASIC2.17□□□□□ -2.06
EPHB3P54753 MIR660-201ENST00000385235 97 ntBASIC2.17□□□□□ -2.06
EPHB3P54753 SNORA48.1-201ENST00000390879 135 ntBASIC2.17□□□□□ -2.06
EPHB3P54753 RNU11-3P-201ENST00000391111 133 ntBASIC2.17□□□□□ -2.06
EPHB3P54753 AC019129.1-201ENST00000403786 261 ntBASIC2.17□□□□□ -2.06
EPHB3P54753 AC093850.1-201ENST00000454121 251 ntBASIC2.17□□□□□ -2.06
EPHB3P54753 RNU7-171P-201ENST00000459581 62 ntBASIC2.17□□□□□ -2.06
EPHB3P54753 RNVU1-2-201ENST00000516326 135 ntBASIC2.17□□□□□ -2.06
EPHB3P54753 RNU6-1006P-201ENST00000516998 103 ntBASIC2.17□□□□□ -2.06
EPHB3P54753 RNA5SP437-201ENST00000517249 129 ntBASIC2.17□□□□□ -2.06
EPHB3P54753 SUB1P4-201ENST00000566062 339 ntBASIC2.17□□□□□ -2.06
EPHB3P54753 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
EPHB3P54753 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
EPHB3P54753 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
EPHB3P54753 MIR764-201ENST00000390811 85 ntBASIC2.16□□□□□ -2.06
EPHB3P54753 RNU6-279P-201ENST00000391297 101 ntBASIC2.16□□□□□ -2.06
EPHB3P54753 Y_RNA.620-201ENST00000411009 88 ntBASIC2.16□□□□□ -2.06
EPHB3P54753 AC090844.1-201ENST00000422019 156 ntBASIC2.16□□□□□ -2.06
EPHB3P54753 AC099513.1-201ENST00000490423 301 ntBASIC2.16□□□□□ -2.06
EPHB3P54753 RNU7-2P-201ENST00000516096 62 ntBASIC2.16□□□□□ -2.06
EPHB3P54753 MIR4666B-201ENST00000578142 81 ntBASIC2.16□□□□□ -2.06
EPHB3P54753 Y_RNA.783-201ENST00000613546 102 ntBASIC2.16□□□□□ -2.06
EPHB3P54753 MIR376B-201ENST00000614515 100 ntBASIC2.16□□□□□ -2.06
EPHB3P54753 SNORD3E-202ENST00000627253 216 ntBASIC2.16□□□□□ -2.06
EPHB3P54753 ZNF355P-201ENST00000427301 3216 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms