Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 MTATP6P21-201ENST00000440681 189 ntBASIC1.45□□□□□ -2.18
TRIM43BA6NCK2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.45□□□□□ -2.18
TRIM43BA6NCK2 MIR151B-201ENST00000584249 96 ntBASIC1.45□□□□□ -2.18
TRIM43BA6NCK2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.45□□□□□ -2.18
TRIM43BA6NCK2 AC091932.4-201ENST00000623386 200 ntBASIC1.45□□□□□ -2.18
TRIM43BA6NCK2 SCARNA15-202ENST00000516881 127 ntBASIC1.44□□□□□ -2.18
TRIM43BA6NCK2 RNU6-255P-201ENST00000516957 105 ntBASIC1.44□□□□□ -2.18
TRIM43BA6NCK2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.44□□□□□ -2.18
TRIM43BA6NCK2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
TRIM43BA6NCK2 RNA5SP264-201ENST00000363115 107 ntBASIC1.43□□□□□ -2.18
TRIM43BA6NCK2 Y_RNA.215-201ENST00000364204 112 ntBASIC1.43□□□□□ -2.18
TRIM43BA6NCK2 RNA5SP436-201ENST00000516020 115 ntBASIC1.43□□□□□ -2.18
TRIM43BA6NCK2 RNU7-200P-201ENST00000516105 62 ntBASIC1.43□□□□□ -2.18
TRIM43BA6NCK2 SNORA25.12-201ENST00000516202 82 ntBASIC1.43□□□□□ -2.18
TRIM43BA6NCK2 MIR548X2-201ENST00000579776 100 ntBASIC1.43□□□□□ -2.18
TRIM43BA6NCK2 MIR548AO-201ENST00000579992 96 ntBASIC1.43□□□□□ -2.18
TRIM43BA6NCK2 Y_RNA.205-201ENST00000364128 113 ntBASIC1.42□□□□□ -2.18
TRIM43BA6NCK2 RNU6-1062P-201ENST00000383908 107 ntBASIC1.42□□□□□ -2.18
TRIM43BA6NCK2 MIR320A-201ENST00000385302 82 ntBASIC1.42□□□□□ -2.18
TRIM43BA6NCK2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.42□□□□□ -2.18
TRIM43BA6NCK2 RNA5SP261-201ENST00000410536 106 ntBASIC1.42□□□□□ -2.18
TRIM43BA6NCK2 snoU13.25-201ENST00000458945 104 ntBASIC1.42□□□□□ -2.18
TRIM43BA6NCK2 SNORD26-201ENST00000384147 75 ntBASIC1.41□□□□□ -2.18
TRIM43BA6NCK2 Y_RNA.488-201ENST00000384403 102 ntBASIC1.41□□□□□ -2.18
TRIM43BA6NCK2 Y_RNA.120-201ENST00000363304 110 ntBASIC1.4□□□□□ -2.19
TRIM43BA6NCK2 SNORA1.1-201ENST00000364671 133 ntBASIC1.4□□□□□ -2.19
TRIM43BA6NCK2 MIR222-201ENST00000384992 110 ntBASIC1.4□□□□□ -2.19
TRIM43BA6NCK2 RNU6-910P-201ENST00000390844 107 ntBASIC1.4□□□□□ -2.19
TRIM43BA6NCK2 RNU6-913P-201ENST00000390913 95 ntBASIC1.4□□□□□ -2.19
TRIM43BA6NCK2 RNU11-2P-201ENST00000516898 142 ntBASIC1.4□□□□□ -2.19
TRIM43BA6NCK2 SNORA70.22-201ENST00000517160 124 ntBASIC1.4□□□□□ -2.19
TRIM43BA6NCK2 Y_RNA.251-201ENST00000364551 99 ntBASIC1.39□□□□□ -2.19
TRIM43BA6NCK2 Y_RNA.343-201ENST00000365354 112 ntBASIC1.39□□□□□ -2.19
TRIM43BA6NCK2 RNU6-396P-201ENST00000365369 105 ntBASIC1.39□□□□□ -2.19
TRIM43BA6NCK2 RNY1P5-201ENST00000383890 115 ntBASIC1.39□□□□□ -2.19
TRIM43BA6NCK2 SNORA20-201ENST00000384662 132 ntBASIC1.39□□□□□ -2.19
TRIM43BA6NCK2 MIR2115-201ENST00000516657 100 ntBASIC1.39□□□□□ -2.19
TRIM43BA6NCK2 AP003716.2-201ENST00000528260 108 ntBASIC1.39□□□□□ -2.19
TRIM43BA6NCK2 PRELID3BP2-201ENST00000605362 201 ntBASIC1.39□□□□□ -2.19
TRIM43BA6NCK2 AL020996.3-201ENST00000606617 222 ntBASIC1.39□□□□□ -2.19
TRIM43BA6NCK2 SNORA80D-201ENST00000384488 135 ntBASIC1.38□□□□□ -2.19
TRIM43BA6NCK2 MIR1185-1-201ENST00000408598 86 ntBASIC1.38□□□□□ -2.19
TRIM43BA6NCK2 AL591704.2-201ENST00000421658 181 ntBASIC1.38□□□□□ -2.19
TRIM43BA6NCK2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.38□□□□□ -2.19
TRIM43BA6NCK2 RNU7-197P-201ENST00000458836 62 ntBASIC1.38□□□□□ -2.19
TRIM43BA6NCK2 RNA5SP236-201ENST00000516169 116 ntBASIC1.38□□□□□ -2.19
TRIM43BA6NCK2 MIR3152-201ENST00000579801 74 ntBASIC1.38□□□□□ -2.19
TRIM43BA6NCK2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.38□□□□□ -2.19
TRIM43BA6NCK2 RNA5SP327-201ENST00000362494 101 ntBASIC1.37□□□□□ -2.19
TRIM43BA6NCK2 RNY1P11-201ENST00000363759 113 ntBASIC1.37□□□□□ -2.19
TRIM43BA6NCK2 RNY1P6-201ENST00000384193 109 ntBASIC1.37□□□□□ -2.19
TRIM43BA6NCK2 MIR569-201ENST00000385228 96 ntBASIC1.37□□□□□ -2.19
TRIM43BA6NCK2 RNU6-460P-201ENST00000391158 108 ntBASIC1.37□□□□□ -2.19
TRIM43BA6NCK2 Y_RNA.690-201ENST00000516603 95 ntBASIC1.37□□□□□ -2.19
TRIM43BA6NCK2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.37□□□□□ -2.19
TRIM43BA6NCK2 AL022345.2-201ENST00000606307 135 ntBASIC1.37□□□□□ -2.19
TRIM43BA6NCK2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.36□□□□□ -2.19
TRIM43BA6NCK2 AL603914.1-201ENST00000401964 204 ntBASIC1.36□□□□□ -2.19
TRIM43BA6NCK2 MIR1302-7-201ENST00000408841 72 ntBASIC1.36□□□□□ -2.19
TRIM43BA6NCK2 HMGN1P33-201ENST00000432945 451 ntBASIC1.36□□□□□ -2.19
TRIM43BA6NCK2 AL392103.1-201ENST00000447000 198 ntBASIC1.36□□□□□ -2.19
TRIM43BA6NCK2 Z97988.1-201ENST00000637697 135 ntBASIC1.36□□□□□ -2.19
TRIM43BA6NCK2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRIM43BA6NCK2 MIR26B-201ENST00000362251 77 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 SNORA25.8-201ENST00000364831 128 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 RNU6-915P-201ENST00000364943 103 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 Y_RNA.374-201ENST00000365606 101 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 Y_RNA.420-201ENST00000384043 110 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 SNORA25-201ENST00000384384 134 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 Y_RNA.506-201ENST00000384494 102 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 SNORD38B-201ENST00000384690 67 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 SNORA75.2-201ENST00000391138 150 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 SNORA75.3-201ENST00000391231 150 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 RNU6-1190P-201ENST00000410811 104 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 MRPL35P3-201ENST00000421557 364 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 RNU7-45P-201ENST00000459460 63 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 SNORD79.1-201ENST00000516069 84 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 Y_RNA.686-201ENST00000516548 134 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 Y_RNA.703-201ENST00000516846 111 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 RNU2-60P-201ENST00000517290 128 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 AP001328.1-201ENST00000528550 176 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 AP000753.3-201ENST00000604083 169 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 MIR8055-201ENST00000610739 97 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 AC011603.4-201ENST00000611325 277 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 SEPT14P17-201ENST00000617978 177 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 MIR6717-201ENST00000622747 73 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 AC021613.1-201ENST00000623880 111 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 SNORD38B-202ENST00000625943 69 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 MIR6516-201ENST00000630554 81 ntBASIC1.35□□□□□ -2.19
TRIM43BA6NCK2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
TRIM43BA6NCK2 RNU6-690P-201ENST00000365242 106 ntBASIC1.34□□□□□ -2.19
TRIM43BA6NCK2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.34□□□□□ -2.19
TRIM43BA6NCK2 SNORD12-201ENST00000391002 90 ntBASIC1.34□□□□□ -2.19
TRIM43BA6NCK2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.34□□□□□ -2.19
TRIM43BA6NCK2 RPS3AP1-201ENST00000413190 320 ntBASIC1.34□□□□□ -2.19
TRIM43BA6NCK2 RNU5E-3P-201ENST00000515913 68 ntBASIC1.34□□□□□ -2.19
TRIM43BA6NCK2 RNU6-346P-201ENST00000516288 111 ntBASIC1.34□□□□□ -2.19
TRIM43BA6NCK2 RNU6-426P-201ENST00000516464 97 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 247.7 ms