Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 Y_RNA.651-201ENST00000459380 103 ntBASIC1.59□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU7-45P-201ENST00000459460 63 ntBASIC1.59□□□□□ -2.15
NIPSNAP3AQ9UFN0 AC015712.3-201ENST00000559380 164 ntBASIC1.59□□□□□ -2.15
NIPSNAP3AQ9UFN0 CYP3A52P-201ENST00000563326 91 ntBASIC1.59□□□□□ -2.15
NIPSNAP3AQ9UFN0 MIR3910-1-201ENST00000580936 111 ntBASIC1.59□□□□□ -2.15
NIPSNAP3AQ9UFN0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.59□□□□□ -2.15
NIPSNAP3AQ9UFN0 MIR3121-201ENST00000579680 77 ntBASIC1.58□□□□□ -2.16
NIPSNAP3AQ9UFN0 MIR548AO-201ENST00000579992 96 ntBASIC1.58□□□□□ -2.16
NIPSNAP3AQ9UFN0 HSPE1P19-201ENST00000603327 295 ntBASIC1.58□□□□□ -2.16
NIPSNAP3AQ9UFN0 AC084768.2-201ENST00000622736 221 ntBASIC1.58□□□□□ -2.16
NIPSNAP3AQ9UFN0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNA5SP432-201ENST00000362480 116 ntBASIC1.57□□□□□ -2.16
NIPSNAP3AQ9UFN0 MIR539-201ENST00000365690 78 ntBASIC1.57□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6-482P-201ENST00000391068 107 ntBASIC1.57□□□□□ -2.16
NIPSNAP3AQ9UFN0 SNORA40.18-201ENST00000391200 128 ntBASIC1.57□□□□□ -2.16
NIPSNAP3AQ9UFN0 AL133373.1-201ENST00000497098 94 ntBASIC1.57□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6-113P-201ENST00000516653 101 ntBASIC1.57□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6-971P-201ENST00000516920 106 ntBASIC1.57□□□□□ -2.16
NIPSNAP3AQ9UFN0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.57□□□□□ -2.16
NIPSNAP3AQ9UFN0 MIR4769-201ENST00000584126 77 ntBASIC1.57□□□□□ -2.16
NIPSNAP3AQ9UFN0 AL020996.3-201ENST00000606617 222 ntBASIC1.57□□□□□ -2.16
NIPSNAP3AQ9UFN0 Y_RNA.114-201ENST00000363265 113 ntBASIC1.56□□□□□ -2.16
NIPSNAP3AQ9UFN0 SNORA1.1-201ENST00000364671 133 ntBASIC1.56□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNA5SP261-201ENST00000410536 106 ntBASIC1.56□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6-1190P-201ENST00000410811 104 ntBASIC1.56□□□□□ -2.16
NIPSNAP3AQ9UFN0 HMGN1P33-201ENST00000432945 451 ntBASIC1.56□□□□□ -2.16
NIPSNAP3AQ9UFN0 snoU13.25-201ENST00000458945 104 ntBASIC1.56□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6-240P-201ENST00000516098 97 ntBASIC1.56□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.56□□□□□ -2.16
NIPSNAP3AQ9UFN0 MIR6845-201ENST00000613182 61 ntBASIC1.56□□□□□ -2.16
NIPSNAP3AQ9UFN0 AC021613.1-201ENST00000623880 111 ntBASIC1.56□□□□□ -2.16
NIPSNAP3AQ9UFN0 AC132825.6-201ENST00000638861 357 ntBASIC1.56□□□□□ -2.16
NIPSNAP3AQ9UFN0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
NIPSNAP3AQ9UFN0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
NIPSNAP3AQ9UFN0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.55□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6-349P-201ENST00000362402 107 ntBASIC1.55□□□□□ -2.16
NIPSNAP3AQ9UFN0 MIR764-201ENST00000390811 85 ntBASIC1.55□□□□□ -2.16
NIPSNAP3AQ9UFN0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.55□□□□□ -2.16
NIPSNAP3AQ9UFN0 SNORA31.4-201ENST00000516049 129 ntBASIC1.55□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6-789P-201ENST00000517105 102 ntBASIC1.55□□□□□ -2.16
NIPSNAP3AQ9UFN0 AC133485.4-201ENST00000561835 220 ntBASIC1.55□□□□□ -2.16
NIPSNAP3AQ9UFN0 AC138907.4-201ENST00000570107 226 ntBASIC1.55□□□□□ -2.16
NIPSNAP3AQ9UFN0 MIR3152-201ENST00000579801 74 ntBASIC1.55□□□□□ -2.16
NIPSNAP3AQ9UFN0 MIR8065-201ENST00000620577 100 ntBASIC1.55□□□□□ -2.16
NIPSNAP3AQ9UFN0 MIR103A2-201ENST00000362154 78 ntBASIC1.54□□□□□ -2.16
NIPSNAP3AQ9UFN0 AC048334.1-201ENST00000477975 159 ntBASIC1.54□□□□□ -2.16
NIPSNAP3AQ9UFN0 AL353997.5-201ENST00000618886 171 ntBASIC1.54□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6-235P-201ENST00000362644 107 ntBASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNA5SP264-201ENST00000363115 107 ntBASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6-647P-201ENST00000364243 107 ntBASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6-1319P-201ENST00000390855 104 ntBASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6-747P-201ENST00000390928 104 ntBASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6-241P-201ENST00000391148 104 ntBASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 RNU6-177P-201ENST00000411257 104 ntBASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 AL158147.1-201ENST00000443970 75 ntBASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 SNORA31.2-201ENST00000516019 134 ntBASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 AC108081.1-201ENST00000604358 221 ntBASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 AC021443.1-201ENST00000604478 211 ntBASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 MIR8081-201ENST00000611533 95 ntBASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 MIR6717-201ENST00000622747 73 ntBASIC1.53□□□□□ -2.16
NIPSNAP3AQ9UFN0 Y_RNA.366-201ENST00000365540 102 ntBASIC1.52□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
NIPSNAP3AQ9UFN0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.52□□□□□ -2.17
NIPSNAP3AQ9UFN0 AC245047.7-201ENST00000440265 293 ntBASIC1.52□□□□□ -2.17
NIPSNAP3AQ9UFN0 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
NIPSNAP3AQ9UFN0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.52□□□□□ -2.17
NIPSNAP3AQ9UFN0 MIR8055-201ENST00000610739 97 ntBASIC1.52□□□□□ -2.17
NIPSNAP3AQ9UFN0 AL137067.1-201ENST00000615933 120 ntBASIC1.52□□□□□ -2.17
NIPSNAP3AQ9UFN0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
NIPSNAP3AQ9UFN0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
NIPSNAP3AQ9UFN0 SNORA26.6-201ENST00000391256 115 ntBASIC1.51□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.51□□□□□ -2.17
NIPSNAP3AQ9UFN0 RPS3AP1-201ENST00000413190 320 ntBASIC1.51□□□□□ -2.17
NIPSNAP3AQ9UFN0 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
NIPSNAP3AQ9UFN0 Z97988.1-201ENST00000637697 135 ntBASIC1.51□□□□□ -2.17
NIPSNAP3AQ9UFN0 SNORA22.1-201ENST00000362701 134 ntBASIC1.5□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU6-396P-201ENST00000365369 105 ntBASIC1.5□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU6-81P-201ENST00000365608 104 ntBASIC1.5□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU6-959P-201ENST00000384671 107 ntBASIC1.5□□□□□ -2.17
NIPSNAP3AQ9UFN0 MIR1185-1-201ENST00000408598 86 ntBASIC1.5□□□□□ -2.17
NIPSNAP3AQ9UFN0 AC090844.1-201ENST00000422019 156 ntBASIC1.5□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU6-970P-201ENST00000516312 107 ntBASIC1.5□□□□□ -2.17
NIPSNAP3AQ9UFN0 AP000942.3-201ENST00000603702 160 ntBASIC1.5□□□□□ -2.17
NIPSNAP3AQ9UFN0 Y_RNA.280-201ENST00000364765 112 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 SNORD38B-201ENST00000384690 67 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 MIR1302-7-201ENST00000408841 72 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNA5SP144-201ENST00000410846 116 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU6-893P-201ENST00000458841 100 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU7-164P-201ENST00000459221 62 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 SNORA25.15-201ENST00000516487 89 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU6-1061P-201ENST00000516530 99 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 MIR2115-201ENST00000516657 100 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU6-1234P-201ENST00000516877 103 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 AP003716.2-201ENST00000528260 108 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 MIR4305-201ENST00000583252 102 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 PRELID3BP2-201ENST00000605362 201 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 SNORD38B-202ENST00000625943 69 ntBASIC1.49□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU6-80P-201ENST00000384195 107 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 341.4 ms