Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 Y_RNA.494-201ENST00000384432 111 ntBASIC1.29□□□□□ -2.2
HOXA13P31271 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
HOXA13P31271 SNORD28B-201ENST00000390993 75 ntBASIC1.29□□□□□ -2.2
HOXA13P31271 RNU6-394P-201ENST00000410735 107 ntBASIC1.29□□□□□ -2.2
HOXA13P31271 RNU2-55P-201ENST00000411146 174 ntBASIC1.29□□□□□ -2.2
HOXA13P31271 RNU6-693P-201ENST00000516134 107 ntBASIC1.29□□□□□ -2.2
HOXA13P31271 SNORD111.1-201ENST00000516421 86 ntBASIC1.29□□□□□ -2.2
HOXA13P31271 SNORD36C-201ENST00000516733 66 ntBASIC1.29□□□□□ -2.2
HOXA13P31271 SNORA18.7-201ENST00000516910 131 ntBASIC1.29□□□□□ -2.2
HOXA13P31271 MIR3129-201ENST00000581095 76 ntBASIC1.29□□□□□ -2.2
HOXA13P31271 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.29□□□□□ -2.2
HOXA13P31271 RNU6-888P-201ENST00000363010 101 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 Y_RNA.170-201ENST00000363746 110 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 SNORD116-18-201ENST00000383961 92 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 MIR570-201ENST00000384917 97 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 MIR1287-201ENST00000408492 90 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 RNU6-938P-201ENST00000411285 103 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 AF228730.3-201ENST00000436691 102 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.28□□□□□ -2.2
HOXA13P31271 SNORA31.2-201ENST00000516019 134 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 RNU7-40P-201ENST00000516397 64 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 RNA5SP153-201ENST00000516498 76 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 MIR3144-201ENST00000579460 79 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 MIR4662B-201ENST00000579498 81 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 MIR378D2-201ENST00000580636 98 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.28□□□□□ -2.2
HOXA13P31271 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
HOXA13P31271 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.27□□□□□ -2.21
HOXA13P31271 RNU6-774P-201ENST00000363238 107 ntBASIC1.27□□□□□ -2.21
HOXA13P31271 SNORD24-201ENST00000383884 75 ntBASIC1.27□□□□□ -2.21
HOXA13P31271 SNORD38C-201ENST00000384381 69 ntBASIC1.27□□□□□ -2.21
HOXA13P31271 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.27□□□□□ -2.21
HOXA13P31271 AC048334.1-201ENST00000477975 159 ntBASIC1.27□□□□□ -2.21
HOXA13P31271 AC107027.2-201ENST00000512197 115 ntBASIC1.27□□□□□ -2.21
HOXA13P31271 RNU6-365P-201ENST00000517113 106 ntBASIC1.27□□□□□ -2.21
HOXA13P31271 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
HOXA13P31271 MIR6504-201ENST00000613520 61 ntBASIC1.27□□□□□ -2.21
HOXA13P31271 RNU6-939P-201ENST00000384634 107 ntBASIC1.26□□□□□ -2.21
HOXA13P31271 MIR520C-201ENST00000385005 87 ntBASIC1.26□□□□□ -2.21
HOXA13P31271 RNU6-239P-201ENST00000390990 99 ntBASIC1.26□□□□□ -2.21
HOXA13P31271 SNORD77.3-201ENST00000391113 65 ntBASIC1.26□□□□□ -2.21
HOXA13P31271 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.26□□□□□ -2.21
HOXA13P31271 snoU13.25-201ENST00000458945 104 ntBASIC1.26□□□□□ -2.21
HOXA13P31271 SNORA31.4-201ENST00000516049 129 ntBASIC1.26□□□□□ -2.21
HOXA13P31271 RNA5SP272-201ENST00000516095 111 ntBASIC1.26□□□□□ -2.21
HOXA13P31271 RNU6-346P-201ENST00000516288 111 ntBASIC1.26□□□□□ -2.21
HOXA13P31271 RNU7-121P-201ENST00000516604 62 ntBASIC1.26□□□□□ -2.21
HOXA13P31271 MTND5P32-201ENST00000560711 1802 ntBASIC1.26□□□□□ -2.21
HOXA13P31271 SNORA79-201ENST00000408376 140 ntBASIC1.25□□□□□ -2.21
HOXA13P31271 AL591704.2-201ENST00000421658 181 ntBASIC1.25□□□□□ -2.21
HOXA13P31271 SNORD123-201ENST00000459473 70 ntBASIC1.25□□□□□ -2.21
HOXA13P31271 AC087343.1-201ENST00000477341 475 ntBASIC1.25□□□□□ -2.21
HOXA13P31271 SNORD116-25-201ENST00000516517 92 ntBASIC1.25□□□□□ -2.21
HOXA13P31271 SNORA70.22-201ENST00000517160 124 ntBASIC1.25□□□□□ -2.21
HOXA13P31271 Y_RNA.37-201ENST00000362606 108 ntBASIC1.24□□□□□ -2.21
HOXA13P31271 SNORD115-28-201ENST00000363931 81 ntBASIC1.24□□□□□ -2.21
HOXA13P31271 RNU4-11P-201ENST00000365287 132 ntBASIC1.24□□□□□ -2.21
HOXA13P31271 SNORD114-22-201ENST00000365423 72 ntBASIC1.24□□□□□ -2.21
HOXA13P31271 Y_RNA.357-201ENST00000365487 109 ntBASIC1.24□□□□□ -2.21
HOXA13P31271 Y_RNA.393-201ENST00000383936 102 ntBASIC1.24□□□□□ -2.21
HOXA13P31271 Y_RNA.506-201ENST00000384494 102 ntBASIC1.24□□□□□ -2.21
HOXA13P31271 Y_RNA.521-201ENST00000384560 114 ntBASIC1.24□□□□□ -2.21
HOXA13P31271 RNU6-910P-201ENST00000390844 107 ntBASIC1.24□□□□□ -2.21
HOXA13P31271 RNU6-588P-201ENST00000410281 105 ntBASIC1.24□□□□□ -2.21
HOXA13P31271 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.24□□□□□ -2.21
HOXA13P31271 RNU6-504P-201ENST00000516568 104 ntBASIC1.24□□□□□ -2.21
HOXA13P31271 RNU6-1212P-201ENST00000517023 104 ntBASIC1.24□□□□□ -2.21
HOXA13P31271 MIR548AR-201ENST00000582191 57 ntBASIC1.24□□□□□ -2.21
HOXA13P31271 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.24□□□□□ -2.21
HOXA13P31271 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.24□□□□□ -2.21
HOXA13P31271 RNU6-508P-201ENST00000363231 103 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 RNU6-151P-201ENST00000364158 107 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 Y_RNA.242-201ENST00000364473 110 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 U8.17-201ENST00000391292 132 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 SUMO1P3-201ENST00000439961 304 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 AL133373.1-201ENST00000497098 94 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 RNU7-41P-201ENST00000515917 61 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 SNORA18.4-201ENST00000516440 124 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 SNORA74.3-201ENST00000517108 154 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 RNU2-60P-201ENST00000517290 128 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 MIR3192-201ENST00000584920 77 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 AL365205.2-201ENST00000594586 68 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 AL022345.2-201ENST00000606307 135 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 AL096861.1-201ENST00000610899 123 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 MIR6767-201ENST00000637302 66 ntBASIC1.23□□□□□ -2.21
HOXA13P31271 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
HOXA13P31271 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HOXA13P31271 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HOXA13P31271 Y_RNA.464-201ENST00000384282 110 ntBASIC1.22□□□□□ -2.21
HOXA13P31271 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
HOXA13P31271 AC245047.7-201ENST00000440265 293 ntBASIC1.22□□□□□ -2.21
HOXA13P31271 RNU7-200P-201ENST00000516105 62 ntBASIC1.22□□□□□ -2.21
HOXA13P31271 RNU6-830P-201ENST00000516353 107 ntBASIC1.22□□□□□ -2.21
HOXA13P31271 SNORD114-21-201ENST00000606412 72 ntBASIC1.22□□□□□ -2.21
HOXA13P31271 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.22□□□□□ -2.21
HOXA13P31271 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
HOXA13P31271 Y_RNA.241-201ENST00000364470 117 ntBASIC1.21□□□□□ -2.22
HOXA13P31271 Y_RNA.337-201ENST00000365312 102 ntBASIC1.21□□□□□ -2.22
HOXA13P31271 RNU6-597P-201ENST00000365620 102 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms