Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
VAMP1P23763 MIR8057-201ENST00000620957 69 ntBASIC1.95□□□□□ -2.1
VAMP1P23763 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
VAMP1P23763 RNU6-349P-201ENST00000362402 107 ntBASIC1.94□□□□□ -2.1
VAMP1P23763 RNA5SP68-201ENST00000363885 119 ntBASIC1.94□□□□□ -2.1
VAMP1P23763 MIR27B-201ENST00000385129 97 ntBASIC1.94□□□□□ -2.1
VAMP1P23763 Y_RNA.651-201ENST00000459380 103 ntBASIC1.94□□□□□ -2.1
VAMP1P23763 AC104435.1-201ENST00000483483 166 ntBASIC1.94□□□□□ -2.1
VAMP1P23763 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
VAMP1P23763 AC009831.4-201ENST00000620744 325 ntBASIC1.94□□□□□ -2.1
VAMP1P23763 RNU6-235P-201ENST00000362644 107 ntBASIC1.93□□□□□ -2.1
VAMP1P23763 SNORA22.1-201ENST00000362701 134 ntBASIC1.93□□□□□ -2.1
VAMP1P23763 RNU6-1190P-201ENST00000410811 104 ntBASIC1.93□□□□□ -2.1
VAMP1P23763 RNU7-164P-201ENST00000459221 62 ntBASIC1.93□□□□□ -2.1
VAMP1P23763 MIR4305-201ENST00000583252 102 ntBASIC1.93□□□□□ -2.1
VAMP1P23763 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VAMP1P23763 Y_RNA.366-201ENST00000365540 102 ntBASIC1.92□□□□□ -2.1
VAMP1P23763 MIR759-201ENST00000390224 91 ntBASIC1.92□□□□□ -2.1
VAMP1P23763 AL158147.1-201ENST00000443970 75 ntBASIC1.92□□□□□ -2.1
VAMP1P23763 RNU11-2P-201ENST00000516898 142 ntBASIC1.92□□□□□ -2.1
VAMP1P23763 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
VAMP1P23763 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.92□□□□□ -2.1
VAMP1P23763 MIR1291-201ENST00000627649 87 ntBASIC1.92□□□□□ -2.1
VAMP1P23763 RNU6-1054P-201ENST00000411293 104 ntBASIC1.91□□□□□ -2.1
VAMP1P23763 MRPL35P3-201ENST00000421557 364 ntBASIC1.91□□□□□ -2.1
VAMP1P23763 AC026436.1-201ENST00000510537 270 ntBASIC1.91□□□□□ -2.1
VAMP1P23763 RNA5SP320-201ENST00000516263 124 ntBASIC1.91□□□□□ -2.1
VAMP1P23763 SNORA70.22-201ENST00000517160 124 ntBASIC1.91□□□□□ -2.1
VAMP1P23763 Z97988.1-201ENST00000637697 135 ntBASIC1.91□□□□□ -2.1
VAMP1P23763 Y_RNA.500-201ENST00000384466 111 ntBASIC1.9□□□□□ -2.11
VAMP1P23763 RNU6-910P-201ENST00000390844 107 ntBASIC1.9□□□□□ -2.11
VAMP1P23763 SNORA11.2-201ENST00000408318 127 ntBASIC1.9□□□□□ -2.11
VAMP1P23763 RNU7-113P-201ENST00000459273 62 ntBASIC1.9□□□□□ -2.11
VAMP1P23763 S100A11P2-201ENST00000467589 312 ntBASIC1.9□□□□□ -2.11
VAMP1P23763 MIR3683-201ENST00000580847 82 ntBASIC1.9□□□□□ -2.11
VAMP1P23763 AC103810.6-201ENST00000606708 136 ntBASIC1.9□□□□□ -2.11
VAMP1P23763 MIR8055-201ENST00000610739 97 ntBASIC1.9□□□□□ -2.11
VAMP1P23763 MIR6766-201ENST00000622641 72 ntBASIC1.9□□□□□ -2.11
VAMP1P23763 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
VAMP1P23763 MIR1263-201ENST00000408324 86 ntBASIC1.89□□□□□ -2.11
VAMP1P23763 AL591704.2-201ENST00000421658 181 ntBASIC1.89□□□□□ -2.11
VAMP1P23763 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.89□□□□□ -2.11
VAMP1P23763 SNORD109B-201ENST00000458961 67 ntBASIC1.89□□□□□ -2.11
VAMP1P23763 RNU6-717P-201ENST00000459076 104 ntBASIC1.89□□□□□ -2.11
VAMP1P23763 SNORD109A-201ENST00000459128 67 ntBASIC1.89□□□□□ -2.11
VAMP1P23763 RN7SKP19-201ENST00000516016 252 ntBASIC1.89□□□□□ -2.11
VAMP1P23763 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VAMP1P23763 SNORA80D-201ENST00000384488 135 ntBASIC1.88□□□□□ -2.11
VAMP1P23763 RNU1-98P-201ENST00000458992 160 ntBASIC1.88□□□□□ -2.11
VAMP1P23763 RN7SKP179-201ENST00000516126 217 ntBASIC1.88□□□□□ -2.11
VAMP1P23763 RNU6-62P-201ENST00000516526 102 ntBASIC1.88□□□□□ -2.11
VAMP1P23763 AC108081.1-201ENST00000604358 221 ntBASIC1.88□□□□□ -2.11
VAMP1P23763 Y_RNA.430-201ENST00000384081 110 ntBASIC1.87□□□□□ -2.11
VAMP1P23763 RNU6-80P-201ENST00000384195 107 ntBASIC1.87□□□□□ -2.11
VAMP1P23763 SNORA44-201ENST00000384584 132 ntBASIC1.87□□□□□ -2.11
VAMP1P23763 RNA5SP237-201ENST00000410414 113 ntBASIC1.87□□□□□ -2.11
VAMP1P23763 RNA5SP144-201ENST00000410846 116 ntBASIC1.87□□□□□ -2.11
VAMP1P23763 PRELID3BP2-201ENST00000605362 201 ntBASIC1.87□□□□□ -2.11
VAMP1P23763 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
VAMP1P23763 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
VAMP1P23763 RNA5SP138-201ENST00000365098 114 ntBASIC1.86□□□□□ -2.11
VAMP1P23763 RNU6-1117P-201ENST00000384525 104 ntBASIC1.86□□□□□ -2.11
VAMP1P23763 RNU6-959P-201ENST00000384671 107 ntBASIC1.86□□□□□ -2.11
VAMP1P23763 SNORA26.6-201ENST00000391256 115 ntBASIC1.86□□□□□ -2.11
VAMP1P23763 MIR1185-1-201ENST00000408598 86 ntBASIC1.86□□□□□ -2.11
VAMP1P23763 RNU6-602P-201ENST00000411155 105 ntBASIC1.86□□□□□ -2.11
VAMP1P23763 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
VAMP1P23763 RNA5SP24-201ENST00000516478 95 ntBASIC1.86□□□□□ -2.11
VAMP1P23763 RNU6-1234P-201ENST00000516877 103 ntBASIC1.86□□□□□ -2.11
VAMP1P23763 ELOCP29-201ENST00000588193 334 ntBASIC1.86□□□□□ -2.11
VAMP1P23763 MIR7106-201ENST00000612419 65 ntBASIC1.86□□□□□ -2.11
VAMP1P23763 Y_RNA.298-201ENST00000364960 107 ntBASIC1.85□□□□□ -2.11
VAMP1P23763 RNA5SP126-201ENST00000365092 109 ntBASIC1.85□□□□□ -2.11
VAMP1P23763 AC008267.6-201ENST00000441664 139 ntBASIC1.85□□□□□ -2.11
VAMP1P23763 RPL39P25-201ENST00000449384 154 ntBASIC1.85□□□□□ -2.11
VAMP1P23763 snoU13.25-201ENST00000458945 104 ntBASIC1.85□□□□□ -2.11
VAMP1P23763 AC025033.1-201ENST00000463883 194 ntBASIC1.85□□□□□ -2.11
VAMP1P23763 MIR4264-201ENST00000583520 66 ntBASIC1.85□□□□□ -2.11
VAMP1P23763 SEPT14P17-201ENST00000617978 177 ntBASIC1.85□□□□□ -2.11
VAMP1P23763 AC016717.2-201ENST00000609089 5141 ntBASIC1.84□□□□□ -2.11
VAMP1P23763 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
VAMP1P23763 SNORA2B-201ENST00000384583 137 ntBASIC1.84□□□□□ -2.11
VAMP1P23763 MIR221-201ENST00000385135 110 ntBASIC1.84□□□□□ -2.11
VAMP1P23763 RNU6-205P-201ENST00000390858 107 ntBASIC1.84□□□□□ -2.11
VAMP1P23763 RNU2-52P-201ENST00000410680 190 ntBASIC1.84□□□□□ -2.11
VAMP1P23763 AC090844.1-201ENST00000422019 156 ntBASIC1.84□□□□□ -2.11
VAMP1P23763 RNY4P20-201ENST00000516678 93 ntBASIC1.84□□□□□ -2.11
VAMP1P23763 AP000942.3-201ENST00000603702 160 ntBASIC1.84□□□□□ -2.11
VAMP1P23763 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.84□□□□□ -2.11
VAMP1P23763 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.83□□□□□ -2.12
VAMP1P23763 Y_RNA.71-201ENST00000362892 104 ntBASIC1.83□□□□□ -2.12
VAMP1P23763 SNORA25.8-201ENST00000364831 128 ntBASIC1.83□□□□□ -2.12
VAMP1P23763 RNU6-81P-201ENST00000365608 104 ntBASIC1.83□□□□□ -2.12
VAMP1P23763 SNORA67.4-201ENST00000384688 142 ntBASIC1.83□□□□□ -2.12
VAMP1P23763 RNU6-1237P-201ENST00000384777 107 ntBASIC1.83□□□□□ -2.12
VAMP1P23763 SNORA48.2-201ENST00000390926 124 ntBASIC1.83□□□□□ -2.12
VAMP1P23763 RNA5SP338-201ENST00000410495 85 ntBASIC1.83□□□□□ -2.12
VAMP1P23763 RNA5SP136-201ENST00000410906 107 ntBASIC1.83□□□□□ -2.12
VAMP1P23763 AL606753.1-201ENST00000427435 87 ntBASIC1.83□□□□□ -2.12
VAMP1P23763 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms