Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 YWHAEP2-201ENST00000580066 112 ntBASIC4.05□□□□□ -1.76
TRIM35Q9UPQ4 YWHAEP3-201ENST00000582767 121 ntBASIC4.05□□□□□ -1.76
TRIM35Q9UPQ4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM35Q9UPQ4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM35Q9UPQ4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 Y_RNA.36-201ENST00000362602 112 ntBASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 SNORA38-201ENST00000363946 132 ntBASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 RNU6-1067P-201ENST00000384752 107 ntBASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 RNU2-37P-201ENST00000410695 177 ntBASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 AC079150.2-201ENST00000443733 78 ntBASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 AC006539.3-201ENST00000454258 129 ntBASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 SNORD123-201ENST00000459473 70 ntBASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 SNORA74D-201ENST00000516404 141 ntBASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 SNORA64.4-201ENST00000516632 81 ntBASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 RNA5SP168-201ENST00000516642 112 ntBASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 MIR3064-201ENST00000581130 66 ntBASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 Z97988.1-201ENST00000637697 135 ntBASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TRIM35Q9UPQ4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM35Q9UPQ4 RNY1P2-201ENST00000364820 117 ntBASIC4.03□□□□□ -1.76
TRIM35Q9UPQ4 RNY1P13-201ENST00000365030 105 ntBASIC4.03□□□□□ -1.76
TRIM35Q9UPQ4 MIR561-201ENST00000385216 97 ntBASIC4.03□□□□□ -1.76
TRIM35Q9UPQ4 HSPE1P24-201ENST00000450782 238 ntBASIC4.03□□□□□ -1.76
TRIM35Q9UPQ4 S100A11P2-201ENST00000467589 312 ntBASIC4.03□□□□□ -1.76
TRIM35Q9UPQ4 RN7SL20P-201ENST00000488827 297 ntBASIC4.03□□□□□ -1.76
TRIM35Q9UPQ4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM35Q9UPQ4 AC090897.1-201ENST00000580909 226 ntBASIC4.03□□□□□ -1.76
TRIM35Q9UPQ4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM35Q9UPQ4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM35Q9UPQ4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM35Q9UPQ4 Y_RNA.491-201ENST00000384417 107 ntBASIC4.02□□□□□ -1.77
TRIM35Q9UPQ4 SNORD15B-201ENST00000384714 146 ntBASIC4.02□□□□□ -1.77
TRIM35Q9UPQ4 MIR942-201ENST00000401111 86 ntBASIC4.02□□□□□ -1.77
TRIM35Q9UPQ4 AL034345.1-201ENST00000407768 123 ntBASIC4.02□□□□□ -1.77
TRIM35Q9UPQ4 RPL23AP83-201ENST00000434984 473 ntBASIC4.02□□□□□ -1.77
TRIM35Q9UPQ4 RPL23AP6-201ENST00000446637 472 ntBASIC4.02□□□□□ -1.77
TRIM35Q9UPQ4 AC005908.1-201ENST00000468701 347 ntBASIC4.02□□□□□ -1.77
TRIM35Q9UPQ4 RNU6-850P-201ENST00000516934 103 ntBASIC4.02□□□□□ -1.77
TRIM35Q9UPQ4 MIR4325-201ENST00000583049 90 ntBASIC4.02□□□□□ -1.77
TRIM35Q9UPQ4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC4.02□□□□□ -1.77
TRIM35Q9UPQ4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM35Q9UPQ4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM35Q9UPQ4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 RNU6-132P-201ENST00000383863 107 ntBASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 Y_RNA.443-201ENST00000384135 111 ntBASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 RNU6-1072P-201ENST00000384703 107 ntBASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 RNU6-443P-201ENST00000384780 107 ntBASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 MIR128-1-201ENST00000384921 82 ntBASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 MIR548U-201ENST00000390728 81 ntBASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 SNORA11.4-201ENST00000408823 129 ntBASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 AC018868.1-201ENST00000491307 315 ntBASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 RNA5SP217-201ENST00000515959 91 ntBASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 AL357312.1-201ENST00000603879 298 ntBASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 AL355297.2-201ENST00000604792 129 ntBASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TRIM35Q9UPQ4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4□□□□□ -1.77
TRIM35Q9UPQ4 RNA5SP341-201ENST00000516261 117 ntBASIC4□□□□□ -1.77
TRIM35Q9UPQ4 Xist_exon1.1-201ENST00000618930 85 ntBASIC4□□□□□ -1.77
TRIM35Q9UPQ4 AC007318.2-201ENST00000620999 243 ntBASIC4□□□□□ -1.77
TRIM35Q9UPQ4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4□□□□□ -1.77
TRIM35Q9UPQ4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4□□□□□ -1.77
TRIM35Q9UPQ4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4□□□□□ -1.77
TRIM35Q9UPQ4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
TRIM35Q9UPQ4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM35Q9UPQ4 AL035425.3-201ENST00000564206 4996 ntBASIC3.99□□□□□ -1.77
TRIM35Q9UPQ4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
TRIM35Q9UPQ4 MIR422A-201ENST00000362286 90 ntBASIC3.99□□□□□ -1.77
TRIM35Q9UPQ4 MIR633-201ENST00000384821 98 ntBASIC3.99□□□□□ -1.77
TRIM35Q9UPQ4 AC092628.1-201ENST00000436250 252 ntBASIC3.99□□□□□ -1.77
TRIM35Q9UPQ4 RPL12P50-201ENST00000603116 116 ntBASIC3.99□□□□□ -1.77
TRIM35Q9UPQ4 AL627230.6-201ENST00000611129 280 ntBASIC3.99□□□□□ -1.77
TRIM35Q9UPQ4 AC103706.3-201ENST00000636297 85 ntBASIC3.99□□□□□ -1.77
TRIM35Q9UPQ4 AP000648.3-201ENST00000623539 4507 ntBASIC3.99□□□□□ -1.77
TRIM35Q9UPQ4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
TRIM35Q9UPQ4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM35Q9UPQ4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM35Q9UPQ4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM35Q9UPQ4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM35Q9UPQ4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM35Q9UPQ4 RNU6-669P-201ENST00000365575 107 ntBASIC3.98□□□□□ -1.77
TRIM35Q9UPQ4 RNU6-75P-201ENST00000515944 104 ntBASIC3.98□□□□□ -1.77
TRIM35Q9UPQ4 MIR4511-201ENST00000582784 87 ntBASIC3.98□□□□□ -1.77
TRIM35Q9UPQ4 MIR7515-201ENST00000637837 67 ntBASIC3.98□□□□□ -1.77
TRIM35Q9UPQ4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 MIR22-201ENST00000362190 85 ntBASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 RNU6-330P-201ENST00000363015 107 ntBASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 RNA5SP493-201ENST00000364115 91 ntBASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 RNU6-895P-201ENST00000384125 103 ntBASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 RNU6-571P-201ENST00000384128 107 ntBASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 RNU6-1237P-201ENST00000384777 107 ntBASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 MIR23A-201ENST00000385245 73 ntBASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 SNORA26.7-201ENST00000391288 122 ntBASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 RNA5SP293-201ENST00000410527 113 ntBASIC3.97□□□□□ -1.77
TRIM35Q9UPQ4 RN7SKP132-201ENST00000516001 208 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms