Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AL034345.1-201ENST00000407768 123 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 RNA5SP425-201ENST00000410336 112 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 AC087499.4-201ENST00000448505 178 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 RPS26P48-201ENST00000491713 339 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 SCARNA16.3-201ENST00000516595 184 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 RNA5SP168-201ENST00000516642 112 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 SNORA31.25-201ENST00000517242 134 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 AC002984.1-201ENST00000591692 448 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 MIR6766-201ENST00000622641 72 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 AC064859.1-201ENST00000624741 174 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
CPEB3Q8NE35 MTND5P18-201ENST00000445624 1801 ntBASIC1.98□□□□□ -2.09
CPEB3Q8NE35 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.98□□□□□ -2.09
CPEB3Q8NE35 SNORA63.4-201ENST00000362763 126 ntBASIC1.98□□□□□ -2.09
CPEB3Q8NE35 RNU6-833P-201ENST00000363486 107 ntBASIC1.98□□□□□ -2.09
CPEB3Q8NE35 MIR520A-201ENST00000384862 85 ntBASIC1.98□□□□□ -2.09
CPEB3Q8NE35 MIR17-201ENST00000385012 84 ntBASIC1.98□□□□□ -2.09
CPEB3Q8NE35 MIR548A3-201ENST00000385297 97 ntBASIC1.98□□□□□ -2.09
CPEB3Q8NE35 RPL23AP63-201ENST00000498752 471 ntBASIC1.98□□□□□ -2.09
CPEB3Q8NE35 PDCD5P2-201ENST00000507570 312 ntBASIC1.98□□□□□ -2.09
CPEB3Q8NE35 AC008413.1-201ENST00000511864 177 ntBASIC1.98□□□□□ -2.09
CPEB3Q8NE35 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.98□□□□□ -2.09
CPEB3Q8NE35 AP003484.1-201ENST00000530974 250 ntBASIC1.98□□□□□ -2.09
CPEB3Q8NE35 MIR4529-201ENST00000578110 78 ntBASIC1.98□□□□□ -2.09
CPEB3Q8NE35 MIR4448-201ENST00000584360 86 ntBASIC1.98□□□□□ -2.09
CPEB3Q8NE35 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CPEB3Q8NE35 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CPEB3Q8NE35 ZNF720P1-201ENST00000562403 1939 ntBASIC1.97□□□□□ -2.09
CPEB3Q8NE35 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.97□□□□□ -2.09
CPEB3Q8NE35 SNORD38C-201ENST00000384381 69 ntBASIC1.97□□□□□ -2.09
CPEB3Q8NE35 MIR1263-201ENST00000408324 86 ntBASIC1.97□□□□□ -2.09
CPEB3Q8NE35 RNU6-240P-201ENST00000516098 97 ntBASIC1.97□□□□□ -2.09
CPEB3Q8NE35 RNU6-830P-201ENST00000516353 107 ntBASIC1.97□□□□□ -2.09
CPEB3Q8NE35 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.97□□□□□ -2.09
CPEB3Q8NE35 AL137067.1-201ENST00000615933 120 ntBASIC1.97□□□□□ -2.09
CPEB3Q8NE35 MIR6873-201ENST00000622788 63 ntBASIC1.97□□□□□ -2.09
CPEB3Q8NE35 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.97□□□□□ -2.09
CPEB3Q8NE35 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
CPEB3Q8NE35 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.97□□□□□ -2.09
CPEB3Q8NE35 RNU6-349P-201ENST00000362402 107 ntBASIC1.96□□□□□ -2.1
CPEB3Q8NE35 RNU6-755P-201ENST00000364400 103 ntBASIC1.96□□□□□ -2.1
CPEB3Q8NE35 RNA5SP126-201ENST00000365092 109 ntBASIC1.96□□□□□ -2.1
CPEB3Q8NE35 SNORD116-21-201ENST00000384507 92 ntBASIC1.96□□□□□ -2.1
CPEB3Q8NE35 RNA5SP450-201ENST00000411206 102 ntBASIC1.96□□□□□ -2.1
CPEB3Q8NE35 AC063976.4-201ENST00000421971 163 ntBASIC1.96□□□□□ -2.1
CPEB3Q8NE35 AC015922.2-201ENST00000435593 184 ntBASIC1.96□□□□□ -2.1
CPEB3Q8NE35 Y_RNA.649-201ENST00000459077 103 ntBASIC1.96□□□□□ -2.1
CPEB3Q8NE35 AC099513.1-201ENST00000490423 301 ntBASIC1.96□□□□□ -2.1
CPEB3Q8NE35 AL121890.5-201ENST00000620848 304 ntBASIC1.96□□□□□ -2.1
CPEB3Q8NE35 MIRLET7G-201ENST00000362280 84 ntBASIC1.95□□□□□ -2.1
CPEB3Q8NE35 Y_RNA.35-201ENST00000362601 101 ntBASIC1.95□□□□□ -2.1
CPEB3Q8NE35 Y_RNA.528-201ENST00000384575 108 ntBASIC1.95□□□□□ -2.1
CPEB3Q8NE35 MIR548A1-201ENST00000385041 97 ntBASIC1.95□□□□□ -2.1
CPEB3Q8NE35 MIR221-201ENST00000385135 110 ntBASIC1.95□□□□□ -2.1
CPEB3Q8NE35 RNU7-12P-201ENST00000516030 62 ntBASIC1.95□□□□□ -2.1
CPEB3Q8NE35 SNORA18.7-201ENST00000516910 131 ntBASIC1.95□□□□□ -2.1
CPEB3Q8NE35 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.95□□□□□ -2.1
CPEB3Q8NE35 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CPEB3Q8NE35 AC021506.2-201ENST00000612354 169 ntBASIC1.95□□□□□ -2.1
CPEB3Q8NE35 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.95□□□□□ -2.1
CPEB3Q8NE35 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.95□□□□□ -2.1
CPEB3Q8NE35 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
CPEB3Q8NE35 SNORA22-201ENST00000383907 134 ntBASIC1.94□□□□□ -2.1
CPEB3Q8NE35 RNU2-7P-201ENST00000410794 178 ntBASIC1.94□□□□□ -2.1
CPEB3Q8NE35 RNA5SP100-201ENST00000410903 110 ntBASIC1.94□□□□□ -2.1
CPEB3Q8NE35 RNA5SP136-201ENST00000410906 107 ntBASIC1.94□□□□□ -2.1
CPEB3Q8NE35 RNA5SP59-201ENST00000410922 110 ntBASIC1.94□□□□□ -2.1
CPEB3Q8NE35 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.94□□□□□ -2.1
CPEB3Q8NE35 RNU2-19P-201ENST00000517288 84 ntBASIC1.94□□□□□ -2.1
CPEB3Q8NE35 AC078899.2-201ENST00000595282 212 ntBASIC1.94□□□□□ -2.1
CPEB3Q8NE35 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.94□□□□□ -2.1
CPEB3Q8NE35 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.94□□□□□ -2.1
CPEB3Q8NE35 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CPEB3Q8NE35 RNU6-690P-201ENST00000365242 106 ntBASIC1.93□□□□□ -2.1
CPEB3Q8NE35 AL627390.1-201ENST00000396055 340 ntBASIC1.93□□□□□ -2.1
CPEB3Q8NE35 snoU13.27-201ENST00000459278 104 ntBASIC1.93□□□□□ -2.1
CPEB3Q8NE35 RNU7-34P-201ENST00000459394 64 ntBASIC1.93□□□□□ -2.1
CPEB3Q8NE35 RN7SL429P-201ENST00000479090 223 ntBASIC1.93□□□□□ -2.1
CPEB3Q8NE35 RN7SL489P-201ENST00000486185 223 ntBASIC1.93□□□□□ -2.1
CPEB3Q8NE35 RN7SL327P-201ENST00000488659 223 ntBASIC1.93□□□□□ -2.1
CPEB3Q8NE35 MIR1273D-201ENST00000577266 86 ntBASIC1.93□□□□□ -2.1
CPEB3Q8NE35 MIR4709-201ENST00000577272 72 ntBASIC1.93□□□□□ -2.1
CPEB3Q8NE35 RN7SL853P-201ENST00000617250 223 ntBASIC1.93□□□□□ -2.1
CPEB3Q8NE35 AC009831.4-201ENST00000620744 325 ntBASIC1.93□□□□□ -2.1
CPEB3Q8NE35 AC091932.4-201ENST00000623386 200 ntBASIC1.93□□□□□ -2.1
CPEB3Q8NE35 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CPEB3Q8NE35 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CPEB3Q8NE35 Y_RNA.241-201ENST00000364470 117 ntBASIC1.92□□□□□ -2.1
CPEB3Q8NE35 RNU1-133P-201ENST00000364867 167 ntBASIC1.92□□□□□ -2.1
CPEB3Q8NE35 Y_RNA.351-201ENST00000365436 96 ntBASIC1.92□□□□□ -2.1
CPEB3Q8NE35 RNY1P6-201ENST00000384193 109 ntBASIC1.92□□□□□ -2.1
CPEB3Q8NE35 SNORA70B-201ENST00000384210 135 ntBASIC1.92□□□□□ -2.1
CPEB3Q8NE35 Y_RNA.494-201ENST00000384432 111 ntBASIC1.92□□□□□ -2.1
CPEB3Q8NE35 RNU6-880P-201ENST00000384526 107 ntBASIC1.92□□□□□ -2.1
CPEB3Q8NE35 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CPEB3Q8NE35 AC093850.1-201ENST00000454121 251 ntBASIC1.92□□□□□ -2.1
CPEB3Q8NE35 AC055731.1-201ENST00000474387 401 ntBASIC1.92□□□□□ -2.1
CPEB3Q8NE35 RNA5SP200-201ENST00000516360 103 ntBASIC1.92□□□□□ -2.1
CPEB3Q8NE35 RNA5SP481-201ENST00000516814 122 ntBASIC1.92□□□□□ -2.1
CPEB3Q8NE35 RNU7-70P-201ENST00000516941 66 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 220.3 ms