Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 SNORA3A-201ENST00000364113 130 ntBASIC2.26□□□□□ -2.05
SYNE4Q8N205 SNORA22-201ENST00000383907 134 ntBASIC2.26□□□□□ -2.05
SYNE4Q8N205 RNU1-52P-201ENST00000384190 164 ntBASIC2.26□□□□□ -2.05
SYNE4Q8N205 MIR144-201ENST00000384886 86 ntBASIC2.26□□□□□ -2.05
SYNE4Q8N205 MIRLET7F2-201ENST00000385277 83 ntBASIC2.26□□□□□ -2.05
SYNE4Q8N205 RNA5SP127-201ENST00000411051 133 ntBASIC2.26□□□□□ -2.05
SYNE4Q8N205 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.26□□□□□ -2.05
SYNE4Q8N205 AC023449.1-201ENST00000454464 154 ntBASIC2.26□□□□□ -2.05
SYNE4Q8N205 SNORA18.4-201ENST00000516440 124 ntBASIC2.26□□□□□ -2.05
SYNE4Q8N205 RNU6-365P-201ENST00000517113 106 ntBASIC2.26□□□□□ -2.05
SYNE4Q8N205 IGLV3-17-201ENST00000519099 244 ntBASIC2.26□□□□□ -2.05
SYNE4Q8N205 AC121758.2-201ENST00000553271 193 ntBASIC2.26□□□□□ -2.05
SYNE4Q8N205 AL359075.3-201ENST00000613288 217 ntBASIC2.26□□□□□ -2.05
SYNE4Q8N205 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SYNE4Q8N205 MIR126-201ENST00000362291 85 ntBASIC2.25□□□□□ -2.05
SYNE4Q8N205 Y_RNA.35-201ENST00000362601 101 ntBASIC2.25□□□□□ -2.05
SYNE4Q8N205 RNU6-862P-201ENST00000362804 105 ntBASIC2.25□□□□□ -2.05
SYNE4Q8N205 RNU6-23P-201ENST00000363283 107 ntBASIC2.25□□□□□ -2.05
SYNE4Q8N205 MIR518F-201ENST00000384973 87 ntBASIC2.25□□□□□ -2.05
SYNE4Q8N205 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.25□□□□□ -2.05
SYNE4Q8N205 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.25□□□□□ -2.05
SYNE4Q8N205 AC063976.4-201ENST00000421971 163 ntBASIC2.25□□□□□ -2.05
SYNE4Q8N205 AL163195.1-201ENST00000496941 348 ntBASIC2.25□□□□□ -2.05
SYNE4Q8N205 RNU6-341P-201ENST00000516973 96 ntBASIC2.25□□□□□ -2.05
SYNE4Q8N205 AL353149.1-201ENST00000610667 244 ntBASIC2.25□□□□□ -2.05
SYNE4Q8N205 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.25□□□□□ -2.05
SYNE4Q8N205 MIR6895-201ENST00000613497 78 ntBASIC2.25□□□□□ -2.05
SYNE4Q8N205 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.25□□□□□ -2.05
SYNE4Q8N205 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.25□□□□□ -2.05
SYNE4Q8N205 SNORA8-201ENST00000384574 139 ntBASIC2.24□□□□□ -2.05
SYNE4Q8N205 MIR522-201ENST00000385071 87 ntBASIC2.24□□□□□ -2.05
SYNE4Q8N205 MIR29C-201ENST00000385231 88 ntBASIC2.24□□□□□ -2.05
SYNE4Q8N205 SNORD77.3-201ENST00000391113 65 ntBASIC2.24□□□□□ -2.05
SYNE4Q8N205 MIR1283-2-201ENST00000408621 87 ntBASIC2.24□□□□□ -2.05
SYNE4Q8N205 ATP5J2P3-201ENST00000451550 258 ntBASIC2.24□□□□□ -2.05
SYNE4Q8N205 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.24□□□□□ -2.05
SYNE4Q8N205 CYCTP-201ENST00000504253 315 ntBASIC2.24□□□□□ -2.05
SYNE4Q8N205 DNAJC19P9-201ENST00000555084 351 ntBASIC2.24□□□□□ -2.05
SYNE4Q8N205 MIR4662B-201ENST00000579498 81 ntBASIC2.24□□□□□ -2.05
SYNE4Q8N205 RNU1-58P-201ENST00000362413 163 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 RNU6-888P-201ENST00000363010 101 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 RNU6-755P-201ENST00000364400 103 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 RNU6-147P-201ENST00000383983 107 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 SNORA67.5-201ENST00000391036 107 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 HMGN2P39-201ENST00000398005 273 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 MIR1276-201ENST00000408707 83 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 AF228730.3-201ENST00000436691 102 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 RN7SKP19-201ENST00000516016 252 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 RNU6-1146P-201ENST00000516282 102 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 RNU1-40P-201ENST00000516816 164 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 RNU1-97P-201ENST00000516872 164 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 SCARNA15-202ENST00000516881 127 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 MIR3613-201ENST00000579844 87 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 MIR5694-201ENST00000581190 76 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 AC022217.4-201ENST00000604389 163 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 U6.95-201ENST00000636931 70 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 AP000553.5-201ENST00000641933 54 ntBASIC2.23□□□□□ -2.05
SYNE4Q8N205 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SYNE4Q8N205 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SYNE4Q8N205 SNORA6-201ENST00000384033 151 ntBASIC2.22□□□□□ -2.05
SYNE4Q8N205 MIR518A2-201ENST00000384966 87 ntBASIC2.22□□□□□ -2.05
SYNE4Q8N205 MIR597-201ENST00000384968 97 ntBASIC2.22□□□□□ -2.05
SYNE4Q8N205 MIR548A1-201ENST00000385041 97 ntBASIC2.22□□□□□ -2.05
SYNE4Q8N205 SNORA26-201ENST00000391286 122 ntBASIC2.22□□□□□ -2.05
SYNE4Q8N205 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.22□□□□□ -2.05
SYNE4Q8N205 RNU6-693P-201ENST00000516134 107 ntBASIC2.22□□□□□ -2.05
SYNE4Q8N205 RNU6-504P-201ENST00000516568 104 ntBASIC2.22□□□□□ -2.05
SYNE4Q8N205 RNU6-1149P-201ENST00000516810 97 ntBASIC2.22□□□□□ -2.05
SYNE4Q8N205 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.22□□□□□ -2.05
SYNE4Q8N205 AL670379.3-201ENST00000605040 251 ntBASIC2.22□□□□□ -2.05
SYNE4Q8N205 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.22□□□□□ -2.05
SYNE4Q8N205 ICE2P2-201ENST00000483823 2787 ntBASIC2.22□□□□□ -2.05
SYNE4Q8N205 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.22□□□□□ -2.05
SYNE4Q8N205 AC245060.5-201ENST00000610778 3293 ntBASIC2.22□□□□□ -2.05
SYNE4Q8N205 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SYNE4Q8N205 CALM2P4-201ENST00000430810 426 ntBASIC2.21□□□□□ -2.06
SYNE4Q8N205 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.21□□□□□ -2.06
SYNE4Q8N205 RNU7-95P-201ENST00000459222 64 ntBASIC2.21□□□□□ -2.06
SYNE4Q8N205 RNU1-142P-201ENST00000516682 145 ntBASIC2.21□□□□□ -2.06
SYNE4Q8N205 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.21□□□□□ -2.06
SYNE4Q8N205 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
SYNE4Q8N205 MTND5P18-201ENST00000445624 1801 ntBASIC2.2□□□□□ -2.06
SYNE4Q8N205 SNORD68-201ENST00000363214 84 ntBASIC2.2□□□□□ -2.06
SYNE4Q8N205 RNU6-647P-201ENST00000364243 107 ntBASIC2.2□□□□□ -2.06
SYNE4Q8N205 SNORD18B-201ENST00000365659 72 ntBASIC2.2□□□□□ -2.06
SYNE4Q8N205 SNORD24-201ENST00000383884 75 ntBASIC2.2□□□□□ -2.06
SYNE4Q8N205 SNORD116-21-201ENST00000384507 92 ntBASIC2.2□□□□□ -2.06
SYNE4Q8N205 RNA5SP109-201ENST00000391010 116 ntBASIC2.2□□□□□ -2.06
SYNE4Q8N205 RNA5SP323-201ENST00000391094 133 ntBASIC2.2□□□□□ -2.06
SYNE4Q8N205 SNRPGP14-201ENST00000435400 219 ntBASIC2.2□□□□□ -2.06
SYNE4Q8N205 AC079804.2-201ENST00000490376 200 ntBASIC2.2□□□□□ -2.06
SYNE4Q8N205 RNU7-25P-201ENST00000516544 62 ntBASIC2.2□□□□□ -2.06
SYNE4Q8N205 AC025166.1-201ENST00000612411 163 ntBASIC2.2□□□□□ -2.06
SYNE4Q8N205 MIR6504-201ENST00000613520 61 ntBASIC2.2□□□□□ -2.06
SYNE4Q8N205 SNORA16.1-201ENST00000364597 132 ntBASIC2.19□□□□□ -2.06
SYNE4Q8N205 Y_RNA.366-201ENST00000365540 102 ntBASIC2.19□□□□□ -2.06
SYNE4Q8N205 Y_RNA.540-201ENST00000384638 111 ntBASIC2.19□□□□□ -2.06
SYNE4Q8N205 MIR548A3-201ENST00000385297 97 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms