Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.98□□□□□ -2.25
NANOGQ9H9S0 snoU13.25-201ENST00000458945 104 ntBASIC0.98□□□□□ -2.25
NANOGQ9H9S0 NDUFA4P2-201ENST00000489989 244 ntBASIC0.98□□□□□ -2.25
NANOGQ9H9S0 RNU7-12P-201ENST00000516030 62 ntBASIC0.98□□□□□ -2.25
NANOGQ9H9S0 RNU6-570P-201ENST00000517051 105 ntBASIC0.98□□□□□ -2.25
NANOGQ9H9S0 AC127455.1-201ENST00000565496 145 ntBASIC0.98□□□□□ -2.25
NANOGQ9H9S0 MIR3664-201ENST00000579074 99 ntBASIC0.98□□□□□ -2.25
NANOGQ9H9S0 AL162424.1-201ENST00000602325 221 ntBASIC0.98□□□□□ -2.25
NANOGQ9H9S0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.98□□□□□ -2.25
NANOGQ9H9S0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
NANOGQ9H9S0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.98□□□□□ -2.25
NANOGQ9H9S0 RNU4-90P-201ENST00000362773 141 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 SNORD50B-201ENST00000364995 70 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 RNU6-290P-201ENST00000365212 101 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 MIR653-201ENST00000385279 96 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 MT-TW-201ENST00000387382 68 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 MIR548F4-201ENST00000408515 105 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 RNU6-651P-201ENST00000411040 105 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 MLLT10P1-201ENST00000418346 262 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 AC091959.1-201ENST00000495857 238 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 RNU7-28P-201ENST00000516759 62 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 MIR4762-201ENST00000585261 75 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 AC005357.1-201ENST00000588399 301 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 AC120024.3-201ENST00000603167 156 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 SNORA28-201ENST00000606769 126 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 AP001282.2-201ENST00000616149 309 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 MIR548AY-201ENST00000617669 107 ntBASIC0.97□□□□□ -2.25
NANOGQ9H9S0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.97□□□□□ -2.25
NANOGQ9H9S0 RNU6-199P-201ENST00000362954 107 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 RNU6-238P-201ENST00000363313 106 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 RNU6-1209P-201ENST00000363655 107 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.796-201ENST00000364268 102 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 U8.5-201ENST00000364528 136 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.799-201ENST00000364992 102 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.376-201ENST00000365638 108 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 AC117470.1-201ENST00000381974 330 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 RNU6-1160P-201ENST00000384546 104 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 MIR606-201ENST00000384851 96 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 MTCO2P33-201ENST00000402100 465 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 RNU6-710P-201ENST00000410424 105 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 SNORA36B-201ENST00000410438 131 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 RNU6-1203P-201ENST00000410703 110 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 SNX2P2-201ENST00000424553 323 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 RPL39P38-201ENST00000467018 153 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 RPL23AP54-201ENST00000495129 419 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.96□□□□□ -2.26
NANOGQ9H9S0 SCARNA24.2-201ENST00000516968 130 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.96□□□□□ -2.26
NANOGQ9H9S0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.96□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.812-201ENST00000610788 101 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.784-201ENST00000613803 101 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.787-201ENST00000616522 101 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.780-201ENST00000617336 101 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.801-201ENST00000619005 101 ntBASIC0.96□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.203-201ENST00000364106 102 ntBASIC0.95□□□□□ -2.26
NANOGQ9H9S0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
NANOGQ9H9S0 SNORA25.9-201ENST00000365087 128 ntBASIC0.95□□□□□ -2.26
NANOGQ9H9S0 RNU6-738P-201ENST00000384531 106 ntBASIC0.95□□□□□ -2.26
NANOGQ9H9S0 MIR562-201ENST00000384894 95 ntBASIC0.95□□□□□ -2.26
NANOGQ9H9S0 RNU6-383P-201ENST00000410864 94 ntBASIC0.95□□□□□ -2.26
NANOGQ9H9S0 AL731563.1-201ENST00000442202 214 ntBASIC0.95□□□□□ -2.26
NANOGQ9H9S0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.95□□□□□ -2.26
NANOGQ9H9S0 RNU6-635P-201ENST00000516651 102 ntBASIC0.95□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.720-201ENST00000517166 92 ntBASIC0.95□□□□□ -2.26
NANOGQ9H9S0 DEFB108E-201ENST00000524692 240 ntBASIC0.95□□□□□ -2.26
NANOGQ9H9S0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.95□□□□□ -2.26
NANOGQ9H9S0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.95□□□□□ -2.26
NANOGQ9H9S0 AC136443.5-201ENST00000603741 370 ntBASIC0.95□□□□□ -2.26
NANOGQ9H9S0 AL008718.3-201ENST00000610217 321 ntBASIC0.95□□□□□ -2.26
NANOGQ9H9S0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
NANOGQ9H9S0 RNA5SP327-201ENST00000362494 101 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 RNU6-833P-201ENST00000363486 107 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.217-201ENST00000364214 105 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 RNU4-10P-201ENST00000364383 140 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 RNU6-969P-201ENST00000383900 105 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 RNU6-472P-201ENST00000384299 107 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.483-201ENST00000384380 101 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 RNU6-163P-201ENST00000384396 106 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.572-201ENST00000384757 98 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 MIR516B2-201ENST00000385190 85 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
NANOGQ9H9S0 AL603910.2-201ENST00000407268 136 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 MIR1298-201ENST00000408783 112 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.641-201ENST00000459414 105 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 COX6CP14-201ENST00000469580 174 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 RPL30P7-201ENST00000479312 323 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 AL133373.1-201ENST00000497098 94 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 RNU6-1338P-201ENST00000516328 91 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 SCARNA15.1-201ENST00000516384 125 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 RNU2-31P-201ENST00000516954 155 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 snoU18.1-201ENST00000629629 71 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 AC099654.10-201ENST00000640395 161 ntBASIC0.94□□□□□ -2.26
NANOGQ9H9S0 RNU6-1272P-201ENST00000362776 107 ntBASIC0.93□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.117-201ENST00000363294 101 ntBASIC0.93□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.237-201ENST00000364439 102 ntBASIC0.93□□□□□ -2.26
NANOGQ9H9S0 Y_RNA.238-201ENST00000364441 102 ntBASIC0.93□□□□□ -2.26
NANOGQ9H9S0 RNU6-53P-201ENST00000365367 106 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 313.5 ms