Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SNORA1.1-201ENST00000364671 133 ntBASIC-0.71□□□□□ -2.52
TPM4P67936 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.71□□□□□ -2.52
TPM4P67936 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.71□□□□□ -2.52
TPM4P67936 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.71□□□□□ -2.52
TPM4P67936 RPL39P34-201ENST00000477141 156 ntBASIC-0.71□□□□□ -2.52
TPM4P67936 RNU2-12P-201ENST00000517216 168 ntBASIC-0.71□□□□□ -2.52
TPM4P67936 AL670379.3-201ENST00000605040 251 ntBASIC-0.71□□□□□ -2.52
TPM4P67936 AC022306.2-201ENST00000617563 647 ntBASIC-0.71□□□□□ -2.52
TPM4P67936 AC097520.1-201ENST00000624435 385 ntBASIC-0.71□□□□□ -2.52
TPM4P67936 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.72□□□□□ -2.52
TPM4P67936 RNU6-268P-201ENST00000364174 107 ntBASIC-0.72□□□□□ -2.52
TPM4P67936 MIR106A-201ENST00000384870 81 ntBASIC-0.72□□□□□ -2.52
TPM4P67936 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.72□□□□□ -2.52
TPM4P67936 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.72□□□□□ -2.52
TPM4P67936 AC083798.1-201ENST00000472671 131 ntBASIC-0.72□□□□□ -2.52
TPM4P67936 RNY1P16-201ENST00000363063 111 ntBASIC-0.73□□□□□ -2.53
TPM4P67936 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.73□□□□□ -2.53
TPM4P67936 RNU6-596P-201ENST00000365395 98 ntBASIC-0.73□□□□□ -2.53
TPM4P67936 MIR518F-201ENST00000384973 87 ntBASIC-0.73□□□□□ -2.53
TPM4P67936 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.73□□□□□ -2.53
TPM4P67936 SUMO1P3-201ENST00000439961 304 ntBASIC-0.73□□□□□ -2.53
TPM4P67936 MTND1P17-201ENST00000448961 204 ntBASIC-0.73□□□□□ -2.53
TPM4P67936 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.73□□□□□ -2.53
TPM4P67936 AL158211.1-201ENST00000566763 763 ntBASIC-0.73□□□□□ -2.53
TPM4P67936 MIR4273-201ENST00000582824 84 ntBASIC-0.73□□□□□ -2.53
TPM4P67936 AL355297.3-201ENST00000604082 446 ntBASIC-0.73□□□□□ -2.53
TPM4P67936 AP001330.5-201ENST00000607176 411 ntBASIC-0.73□□□□□ -2.53
TPM4P67936 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.74□□□□□ -2.53
TPM4P67936 SNORD114-12-201ENST00000365400 75 ntBASIC-0.74□□□□□ -2.53
TPM4P67936 SNORA69-201ENST00000383895 132 ntBASIC-0.74□□□□□ -2.53
TPM4P67936 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.74□□□□□ -2.53
TPM4P67936 POLR2KP2-201ENST00000438155 177 ntBASIC-0.74□□□□□ -2.53
TPM4P67936 SNORA40.9-201ENST00000515895 93 ntBASIC-0.74□□□□□ -2.53
TPM4P67936 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.74□□□□□ -2.53
TPM4P67936 uc_338.22-201ENST00000622722 187 ntBASIC-0.74□□□□□ -2.53
TPM4P67936 AC091304.10-201ENST00000641554 121 ntBASIC-0.74□□□□□ -2.53
TPM4P67936 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.75□□□□□ -2.53
TPM4P67936 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.75□□□□□ -2.53
TPM4P67936 MIR588-201ENST00000384900 83 ntBASIC-0.75□□□□□ -2.53
TPM4P67936 RNU6-89P-201ENST00000606519 100 ntBASIC-0.75□□□□□ -2.53
TPM4P67936 RNU6-879P-201ENST00000364328 108 ntBASIC-0.76□□□□□ -2.53
TPM4P67936 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.76□□□□□ -2.53
TPM4P67936 RNU6-652P-201ENST00000365488 107 ntBASIC-0.76□□□□□ -2.53
TPM4P67936 SNORD38B-201ENST00000384690 67 ntBASIC-0.76□□□□□ -2.53
TPM4P67936 MCFD2P1-201ENST00000417812 300 ntBASIC-0.76□□□□□ -2.53
TPM4P67936 AL365203.2-201ENST00000423444 196 ntBASIC-0.76□□□□□ -2.53
TPM4P67936 MTND4LP16-201ENST00000440828 295 ntBASIC-0.76□□□□□ -2.53
TPM4P67936 MTND2P39-201ENST00000457230 764 ntBASIC-0.76□□□□□ -2.53
TPM4P67936 MIR4528-201ENST00000577763 90 ntBASIC-0.76□□□□□ -2.53
TPM4P67936 AC006380.1-201ENST00000603598 186 ntBASIC-0.76□□□□□ -2.53
TPM4P67936 AL391262.2-201ENST00000622466 494 ntBASIC-0.76□□□□□ -2.53
TPM4P67936 RNA5SP275-201ENST00000363936 118 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 SNORA24-201ENST00000384096 131 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 AL031003.1-201ENST00000404229 172 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 RNU6-648P-201ENST00000410190 107 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 RNU2-61P-201ENST00000411069 191 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 AC096531.1-201ENST00000419107 107 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 PDCL2P1-201ENST00000419302 352 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 RNA5SP330-201ENST00000517096 96 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 SCARNA1-201ENST00000517138 166 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 RNA5SP47-201ENST00000517230 109 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 AC138869.1-201ENST00000568623 124 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 AC011921.3-201ENST00000605540 361 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 RNU1-29P-201ENST00000606574 126 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 AC006157.1-201ENST00000611750 366 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.77□□□□□ -2.53
TPM4P67936 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.78□□□□□ -2.53
TPM4P67936 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.78□□□□□ -2.53
TPM4P67936 RNU6-504P-201ENST00000516568 104 ntBASIC-0.78□□□□□ -2.53
TPM4P67936 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.78□□□□□ -2.53
TPM4P67936 RNU6-135P-201ENST00000516769 101 ntBASIC-0.78□□□□□ -2.53
TPM4P67936 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.78□□□□□ -2.53
TPM4P67936 MTND1P24-201ENST00000552175 861 ntBASIC-0.78□□□□□ -2.53
TPM4P67936 ZNF519P2-201ENST00000557032 169 ntBASIC-0.78□□□□□ -2.53
TPM4P67936 MTATP6P24-201ENST00000576835 677 ntBASIC-0.78□□□□□ -2.53
TPM4P67936 MIR3152-201ENST00000579801 74 ntBASIC-0.78□□□□□ -2.53
TPM4P67936 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.78□□□□□ -2.53
TPM4P67936 AC134878.1-201ENST00000619901 243 ntBASIC-0.78□□□□□ -2.53
TPM4P67936 AC067863.3-201ENST00000624172 122 ntBASIC-0.78□□□□□ -2.53
TPM4P67936 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.79□□□□□ -2.54
TPM4P67936 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.79□□□□□ -2.54
TPM4P67936 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.79□□□□□ -2.54
TPM4P67936 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.79□□□□□ -2.54
TPM4P67936 MIR190B-201ENST00000401119 79 ntBASIC-0.79□□□□□ -2.54
TPM4P67936 RNA5SP163-201ENST00000410304 99 ntBASIC-0.79□□□□□ -2.54
TPM4P67936 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.79□□□□□ -2.54
TPM4P67936 AC236972.2-201ENST00000434979 310 ntBASIC-0.79□□□□□ -2.54
TPM4P67936 PRDX4P1-201ENST00000507189 574 ntBASIC-0.79□□□□□ -2.54
TPM4P67936 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.8□□□□□ -2.54
TPM4P67936 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.8□□□□□ -2.54
TPM4P67936 RNU6-46P-201ENST00000383860 107 ntBASIC-0.8□□□□□ -2.54
TPM4P67936 MT-TF-201ENST00000387314 71 ntBASIC-0.8□□□□□ -2.54
TPM4P67936 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.8□□□□□ -2.54
TPM4P67936 snoU13.2-201ENST00000459201 104 ntBASIC-0.8□□□□□ -2.54
TPM4P67936 RNU6-835P-201ENST00000516974 104 ntBASIC-0.8□□□□□ -2.54
TPM4P67936 MIR8066-201ENST00000617280 78 ntBASIC-0.8□□□□□ -2.54
TPM4P67936 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.81□□□□□ -2.54
TPM4P67936 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms