Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 Y_RNA.796-201ENST00000364268 102 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 Y_RNA.799-201ENST00000364992 102 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-1062P-201ENST00000383908 107 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU4-70P-201ENST00000384579 139 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MIR520G-201ENST00000385064 90 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNA5SP109-201ENST00000391010 116 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNA5SP323-201ENST00000391094 133 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNA5SP465-201ENST00000391195 109 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SNORA11.4-201ENST00000408823 129 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RN7SKP101-201ENST00000411376 320 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RN7SKP164-201ENST00000516138 266 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 uc_338.20-201ENST00000621563 178 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MIR367-201ENST00000362299 68 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU4-82P-201ENST00000362443 140 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SNORA1B-201ENST00000362535 133 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 Y_RNA.121-201ENST00000363309 113 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 Y_RNA.267-201ENST00000364679 109 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MIR515-2-201ENST00000384883 83 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MIR515-1-201ENST00000384884 83 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MIR634-201ENST00000385208 97 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SNORA12.1-201ENST00000390873 148 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SNORA48.1-201ENST00000390879 135 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-578P-201ENST00000390980 103 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-1135P-201ENST00000411083 103 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNA5SP450-201ENST00000411206 102 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNA5SP270-201ENST00000411361 118 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SNORD11-201ENST00000459124 84 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC025033.1-201ENST00000463883 194 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RPS29P21-201ENST00000496272 170 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 Y_RNA.662-201ENST00000516028 97 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU1-40P-201ENST00000516816 164 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU1-97P-201ENST00000516872 164 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-255P-201ENST00000516957 105 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-1212P-201ENST00000517023 104 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SUB1P4-201ENST00000566062 339 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MIR4744-201ENST00000581563 82 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MIR5002-201ENST00000584713 97 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AL391903.3-201ENST00000612158 163 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-1209P-201ENST00000363655 107 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 RNU4-41P-201ENST00000364426 143 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 RNU6-275P-201ENST00000364910 107 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 Y_RNA.464-201ENST00000384282 110 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 SNORA40.19-201ENST00000390846 128 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 AL606845.1-201ENST00000404881 255 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 SUMO1P3-201ENST00000439961 304 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 AL021397.1-201ENST00000451806 248 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 AC233266.1-201ENST00000454518 96 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 RPS27P21-201ENST00000486977 252 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 RNU6-1007P-201ENST00000516586 107 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 AC109810.1-201ENST00000534066 224 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 MIR3935-201ENST00000583472 104 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 AC242852.1-201ENST00000612151 96 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 AC244015.1-201ENST00000622301 99 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 AL359851.1-201ENST00000569460 4997 ntBASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SAA2-SAA4A0A096LPE2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 RNU6-103P-201ENST00000363686 107 ntBASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 RNU6-1019P-201ENST00000364424 107 ntBASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 Y_RNA.253-201ENST00000364562 112 ntBASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 Y_RNA.441-201ENST00000384123 112 ntBASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 RNU6-394P-201ENST00000410735 107 ntBASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 AL356320.1-201ENST00000429616 163 ntBASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 NDUFA4P2-201ENST00000489989 244 ntBASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 SNORA31.10-201ENST00000516482 106 ntBASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 RPL23AP91-201ENST00000569211 455 ntBASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 AL365434.2-201ENST00000607979 234 ntBASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SAA2-SAA4A0A096LPE2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.69□□□□□ -2.14
SAA2-SAA4A0A096LPE2 SNORA63D-201ENST00000364359 132 ntBASIC1.69□□□□□ -2.14
SAA2-SAA4A0A096LPE2 SNORA16B-201ENST00000364674 135 ntBASIC1.69□□□□□ -2.14
SAA2-SAA4A0A096LPE2 RNA5SP160-201ENST00000364866 120 ntBASIC1.69□□□□□ -2.14
SAA2-SAA4A0A096LPE2 RNU6-804P-201ENST00000384286 107 ntBASIC1.69□□□□□ -2.14
SAA2-SAA4A0A096LPE2 RNU6-296P-201ENST00000384608 107 ntBASIC1.69□□□□□ -2.14
SAA2-SAA4A0A096LPE2 MIR562-201ENST00000384894 95 ntBASIC1.69□□□□□ -2.14
SAA2-SAA4A0A096LPE2 AL356379.1-201ENST00000414105 126 ntBASIC1.69□□□□□ -2.14
SAA2-SAA4A0A096LPE2 SEPT7P4-201ENST00000437076 306 ntBASIC1.69□□□□□ -2.14
SAA2-SAA4A0A096LPE2 SNRPGP8-201ENST00000454064 226 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms