Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MIR518F-201ENST00000384973 87 ntBASIC-1.4□□□□□ -2.63
ABCA3Q99758 MIR204-201ENST00000385200 110 ntBASIC-1.4□□□□□ -2.63
ABCA3Q99758 MIR378D2-201ENST00000580636 98 ntBASIC-1.4□□□□□ -2.63
ABCA3Q99758 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.41□□□□□ -2.64
ABCA3Q99758 RNU6-740P-201ENST00000364734 105 ntBASIC-1.41□□□□□ -2.64
ABCA3Q99758 SNORD38C-201ENST00000384381 69 ntBASIC-1.41□□□□□ -2.64
ABCA3Q99758 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.41□□□□□ -2.64
ABCA3Q99758 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
ABCA3Q99758 MTND1P12-201ENST00000455231 147 ntBASIC-1.41□□□□□ -2.64
ABCA3Q99758 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.41□□□□□ -2.64
ABCA3Q99758 AC021146.6-201ENST00000514659 117 ntBASIC-1.41□□□□□ -2.64
ABCA3Q99758 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.41□□□□□ -2.64
ABCA3Q99758 SNORA25.14-201ENST00000516481 132 ntBASIC-1.41□□□□□ -2.64
ABCA3Q99758 RNA5SP66-201ENST00000517178 101 ntBASIC-1.41□□□□□ -2.64
ABCA3Q99758 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.41□□□□□ -2.64
ABCA3Q99758 AC091965.4-201ENST00000607691 587 ntBASIC-1.41□□□□□ -2.64
ABCA3Q99758 AC084368.1-201ENST00000620935 65 ntBASIC-1.41□□□□□ -2.64
ABCA3Q99758 MTND1P7-201ENST00000632801 297 ntBASIC-1.41□□□□□ -2.64
ABCA3Q99758 ZNF299P-201ENST00000406845 1804 ntBASIC-1.41□□□□□ -2.64
ABCA3Q99758 RNY4P7-201ENST00000364600 96 ntBASIC-1.42□□□□□ -2.64
ABCA3Q99758 MT-TY-201ENST00000387409 66 ntBASIC-1.42□□□□□ -2.64
ABCA3Q99758 SNORD28B-201ENST00000390993 75 ntBASIC-1.42□□□□□ -2.64
ABCA3Q99758 MTCYBP4-201ENST00000401524 249 ntBASIC-1.42□□□□□ -2.64
ABCA3Q99758 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.42□□□□□ -2.64
ABCA3Q99758 AC006380.1-201ENST00000603598 186 ntBASIC-1.42□□□□□ -2.64
ABCA3Q99758 AC105081.1-201ENST00000617727 106 ntBASIC-1.42□□□□□ -2.64
ABCA3Q99758 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.42□□□□□ -2.64
ABCA3Q99758 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.43□□□□□ -2.64
ABCA3Q99758 RNU6-468P-201ENST00000384003 109 ntBASIC-1.43□□□□□ -2.64
ABCA3Q99758 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
ABCA3Q99758 MIR1257-201ENST00000408490 117 ntBASIC-1.43□□□□□ -2.64
ABCA3Q99758 MTND4P3-201ENST00000417829 541 ntBASIC-1.43□□□□□ -2.64
ABCA3Q99758 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.43□□□□□ -2.64
ABCA3Q99758 AP001330.5-201ENST00000607176 411 ntBASIC-1.43□□□□□ -2.64
ABCA3Q99758 AL139418.1-201ENST00000613613 177 ntBASIC-1.43□□□□□ -2.64
ABCA3Q99758 SNORD87-201ENST00000364849 89 ntBASIC-1.43□□□□□ -2.64
ABCA3Q99758 RNU6-685P-201ENST00000517088 95 ntBASIC-1.43□□□□□ -2.64
ABCA3Q99758 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.43□□□□□ -2.64
ABCA3Q99758 MIR7844-201ENST00000616161 122 ntBASIC-1.43□□□□□ -2.64
ABCA3Q99758 AC009159.2-201ENST00000617603 606 ntBASIC-1.43□□□□□ -2.64
ABCA3Q99758 AC139792.3-201ENST00000623525 224 ntBASIC-1.43□□□□□ -2.64
ABCA3Q99758 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.44□□□□□ -2.64
ABCA3Q99758 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.44□□□□□ -2.64
ABCA3Q99758 RNU6-641P-201ENST00000384006 107 ntBASIC-1.44□□□□□ -2.64
ABCA3Q99758 RNU6-298P-201ENST00000390888 96 ntBASIC-1.44□□□□□ -2.64
ABCA3Q99758 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.44□□□□□ -2.64
ABCA3Q99758 SUMO1P3-201ENST00000439961 304 ntBASIC-1.44□□□□□ -2.64
ABCA3Q99758 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.44□□□□□ -2.64
ABCA3Q99758 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.44□□□□□ -2.64
ABCA3Q99758 MIR4752-201ENST00000579672 72 ntBASIC-1.44□□□□□ -2.64
ABCA3Q99758 AC093726.3-201ENST00000637588 150 ntBASIC-1.44□□□□□ -2.64
ABCA3Q99758 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.45□□□□□ -2.64
ABCA3Q99758 RNU6-407P-201ENST00000365280 104 ntBASIC-1.45□□□□□ -2.64
ABCA3Q99758 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.45□□□□□ -2.64
ABCA3Q99758 RNU6-541P-201ENST00000384709 110 ntBASIC-1.45□□□□□ -2.64
ABCA3Q99758 RNU7-73P-201ENST00000458743 63 ntBASIC-1.45□□□□□ -2.64
ABCA3Q99758 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.45□□□□□ -2.64
ABCA3Q99758 SNORA25.17-201ENST00000517184 124 ntBASIC-1.45□□□□□ -2.64
ABCA3Q99758 MTND1P35-201ENST00000526739 508 ntBASIC-1.45□□□□□ -2.64
ABCA3Q99758 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.45□□□□□ -2.64
ABCA3Q99758 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.45□□□□□ -2.64
ABCA3Q99758 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 AC006210.1-201ENST00000424882 111 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 AL117351.1-201ENST00000438864 766 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 AL359672.1-201ENST00000442302 409 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 MTND2P30-201ENST00000456663 382 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 SNORD45.4-201ENST00000516629 73 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 HIF1AP1-201ENST00000553642 175 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.46□□□□□ -2.64
ABCA3Q99758 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 RNU5B-4P-201ENST00000363508 111 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 RNU6-726P-201ENST00000364680 107 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 U8.17-201ENST00000391292 132 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 MTCO2P3-201ENST00000442543 421 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 MIR4791-201ENST00000607666 84 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.46□□□□□ -2.64
ABCA3Q99758 snoU13.2-201ENST00000459201 104 ntBASIC-1.47□□□□□ -2.64
ABCA3Q99758 RPL23AP75-201ENST00000491601 451 ntBASIC-1.47□□□□□ -2.64
ABCA3Q99758 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.47□□□□□ -2.64
ABCA3Q99758 POLR3GP1-201ENST00000594073 261 ntBASIC-1.47□□□□□ -2.64
ABCA3Q99758 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.47□□□□□ -2.64
ABCA3Q99758 AC073869.9-201ENST00000641610 120 ntBASIC-1.47□□□□□ -2.64
ABCA3Q99758 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.48□□□□□ -2.65
ABCA3Q99758 RNU6-227P-201ENST00000362865 103 ntBASIC-1.48□□□□□ -2.65
ABCA3Q99758 RNU6-119P-201ENST00000364882 107 ntBASIC-1.48□□□□□ -2.65
ABCA3Q99758 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.48□□□□□ -2.65
ABCA3Q99758 SNORA75.4-201ENST00000391278 119 ntBASIC-1.48□□□□□ -2.65
ABCA3Q99758 AL590002.1-201ENST00000406554 418 ntBASIC-1.48□□□□□ -2.65
ABCA3Q99758 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.48□□□□□ -2.65
ABCA3Q99758 SCARNA18B-201ENST00000458806 135 ntBASIC-1.48□□□□□ -2.65
ABCA3Q99758 MTND4P33-201ENST00000556706 766 ntBASIC-1.48□□□□□ -2.65
ABCA3Q99758 MIR3941-201ENST00000582572 103 ntBASIC-1.48□□□□□ -2.65
ABCA3Q99758 BNIP3P39-201ENST00000601077 554 ntBASIC-1.48□□□□□ -2.65
ABCA3Q99758 AC006927.2-201ENST00000639256 389 ntBASIC-1.48□□□□□ -2.65
ABCA3Q99758 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.49□□□□□ -2.65
ABCA3Q99758 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.49□□□□□ -2.65
ABCA3Q99758 RNU6-609P-201ENST00000365459 107 ntBASIC-1.49□□□□□ -2.65
ABCA3Q99758 RNU6-434P-201ENST00000384376 107 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms