Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 RNU1-17P-201ENST00000363022 152 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 SNORA63D-201ENST00000364359 132 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 RNA5SP138-201ENST00000365098 114 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-338P-201ENST00000383888 105 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-296P-201ENST00000384608 107 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 Y_RNA.556-201ENST00000384677 113 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-376P-201ENST00000384731 106 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 RNU2-7P-201ENST00000410794 178 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 CYCSP49-201ENST00000420810 319 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 SNORD127-201ENST00000458892 86 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-1337P-201ENST00000516525 95 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 RNA5SP364-201ENST00000516938 78 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 SCARNA24.2-201ENST00000516968 130 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 MIR4422-201ENST00000581938 83 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 AP000942.3-201ENST00000603702 160 ntBASIC1.73□□□□□ -2.13
KRTCAP3Q53RY4 AL391987.6-201ENST00000305671 199 ntBASIC1.72□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-702P-201ENST00000364982 107 ntBASIC1.72□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-117P-201ENST00000365415 107 ntBASIC1.72□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-439P-201ENST00000384188 106 ntBASIC1.72□□□□□ -2.13
KRTCAP3Q53RY4 Y_RNA.518-201ENST00000384552 113 ntBASIC1.72□□□□□ -2.13
KRTCAP3Q53RY4 RNU7-94P-201ENST00000459576 63 ntBASIC1.72□□□□□ -2.13
KRTCAP3Q53RY4 AC025033.1-201ENST00000463883 194 ntBASIC1.72□□□□□ -2.13
KRTCAP3Q53RY4 AC012433.1-201ENST00000588916 398 ntBASIC1.72□□□□□ -2.13
KRTCAP3Q53RY4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.72□□□□□ -2.13
KRTCAP3Q53RY4 Y_RNA.136-201ENST00000363444 102 ntBASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.288-201ENST00000364854 92 ntBASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-326P-201ENST00000365480 107 ntBASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-1248P-201ENST00000391096 64 ntBASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 SNORA53-201ENST00000391141 249 ntBASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 RNU2-38P-201ENST00000410856 79 ntBASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 MTCO1P5-201ENST00000433573 344 ntBASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-63P-201ENST00000516690 95 ntBASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 RNU2-31P-201ENST00000516954 155 ntBASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 MIR3683-201ENST00000580847 82 ntBASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 AC062037.2-201ENST00000610137 73 ntBASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 U6.104-201ENST00000637979 90 ntBASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 AC018630.2-201ENST00000534866 2403 ntBASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTCAP3Q53RY4 MIR335-201ENST00000362173 94 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 RNU4-80P-201ENST00000363200 141 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.172-201ENST00000363765 102 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-855P-201ENST00000410395 104 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 MTND4LP30-201ENST00000454092 297 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-1132P-201ENST00000459214 107 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 RPL23AP63-201ENST00000498752 471 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 SERF1AP1-201ENST00000514575 187 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 RNA5SP481-201ENST00000516814 122 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 RNA5SP437-201ENST00000517249 129 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 AC004817.2-201ENST00000561794 651 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 AC037487.3-201ENST00000606668 112 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 MIR6079-201ENST00000635807 62 ntBASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTCAP3Q53RY4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 SNORD116-13-201ENST00000384408 92 ntBASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 RNA5SP109-201ENST00000391010 116 ntBASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 AL135790.2-201ENST00000437701 267 ntBASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 AL021397.1-201ENST00000451806 248 ntBASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 MTND1P19-201ENST00000511780 315 ntBASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-191P-201ENST00000516295 94 ntBASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 SNORA25.15-201ENST00000516487 89 ntBASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTCAP3Q53RY4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.14-201ENST00000362415 103 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.341-201ENST00000365341 102 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.368-201ENST00000365547 113 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.456-201ENST00000384232 111 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-136P-201ENST00000384663 107 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.562-201ENST00000384695 113 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 MIR562-201ENST00000384894 95 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 MIR520G-201ENST00000385064 90 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 RNA5SP511-201ENST00000410487 115 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 AC245047.3-201ENST00000429428 127 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 AL162725.1-201ENST00000435405 301 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 HSPE1P9-201ENST00000440046 311 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 AL606517.2-201ENST00000442855 241 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 RPS27P1-201ENST00000450552 247 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 AC091021.1-201ENST00000468051 388 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.680-201ENST00000516441 93 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 AC022217.4-201ENST00000604389 163 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 AP000942.4-201ENST00000604811 241 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms