Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 SNORA1B-201ENST00000362535 133 ntBASIC0.74□□□□□ -2.29
SCN4AP35499 Y_RNA.166-201ENST00000363730 102 ntBASIC0.74□□□□□ -2.29
SCN4AP35499 Y_RNA.361-201ENST00000365515 120 ntBASIC0.74□□□□□ -2.29
SCN4AP35499 STAG3L5P-204ENST00000443759 179 ntBASIC0.74□□□□□ -2.29
SCN4AP35499 RPS20P10-201ENST00000451209 253 ntBASIC0.74□□□□□ -2.29
SCN4AP35499 RNU6-625P-201ENST00000459412 107 ntBASIC0.74□□□□□ -2.29
SCN4AP35499 RNA5SP168-201ENST00000516642 112 ntBASIC0.74□□□□□ -2.29
SCN4AP35499 AL358944.1-201ENST00000528537 144 ntBASIC0.74□□□□□ -2.29
SCN4AP35499 SNORA28-201ENST00000606769 126 ntBASIC0.74□□□□□ -2.29
SCN4AP35499 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.73□□□□□ -2.29
SCN4AP35499 Y_RNA.86-201ENST00000363020 111 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 RNU6-1059P-201ENST00000363752 98 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 Y_RNA.279-201ENST00000364763 95 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 Y_RNA.314-201ENST00000365114 102 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 RNA5SP259-201ENST00000365541 109 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 RNU6-306P-201ENST00000384617 107 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 AL354751.2-201ENST00000415471 210 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 AC005002.2-201ENST00000438228 269 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.73□□□□□ -2.29
SCN4AP35499 RPL39P39-201ENST00000455840 151 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 RNU7-34P-201ENST00000459394 64 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 RNU7-169P-201ENST00000459456 61 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 SNORA40.9-201ENST00000515895 93 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 RNU7-28P-201ENST00000516759 62 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 MIR3664-201ENST00000579074 99 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 AC022441.3-201ENST00000605737 136 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 AC004467.1-201ENST00000615678 330 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 AC090971.5-201ENST00000621102 293 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SCN4AP35499 Y_RNA.106-201ENST00000363189 100 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 SNORA33-201ENST00000363664 130 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 SNORD81.2-201ENST00000365153 76 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 SNORA20B-201ENST00000384220 132 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 Y_RNA.498-201ENST00000384460 102 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 RNA5SP109-201ENST00000391010 116 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.73□□□□□ -2.29
SCN4AP35499 RNU6-1291P-201ENST00000516591 104 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.73□□□□□ -2.29
SCN4AP35499 AC109810.1-201ENST00000534066 224 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.73□□□□□ -2.29
SCN4AP35499 AL132765.2-201ENST00000610812 351 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 AC008873.1-201ENST00000625051 138 ntBASIC0.73□□□□□ -2.29
SCN4AP35499 RNU6-626P-201ENST00000363354 107 ntBASIC0.72□□□□□ -2.29
SCN4AP35499 Y_RNA.267-201ENST00000364679 109 ntBASIC0.72□□□□□ -2.29
SCN4AP35499 Y_RNA.294-201ENST00000364916 102 ntBASIC0.72□□□□□ -2.29
SCN4AP35499 Y_RNA.450-201ENST00000384198 113 ntBASIC0.72□□□□□ -2.29
SCN4AP35499 MRPL42P3-201ENST00000401492 326 ntBASIC0.72□□□□□ -2.29
SCN4AP35499 AL451046.2-201ENST00000403074 277 ntBASIC0.72□□□□□ -2.29
SCN4AP35499 RNU6-1001P-201ENST00000411265 100 ntBASIC0.72□□□□□ -2.29
SCN4AP35499 RNU6-1304P-201ENST00000411374 106 ntBASIC0.72□□□□□ -2.29
SCN4AP35499 MTCO3P19-201ENST00000415864 321 ntBASIC0.72□□□□□ -2.29
SCN4AP35499 AC098614.3-201ENST00000438957 440 ntBASIC0.72□□□□□ -2.29
SCN4AP35499 RPS26P48-201ENST00000491713 339 ntBASIC0.72□□□□□ -2.29
SCN4AP35499 RNU6-1337P-201ENST00000516525 95 ntBASIC0.72□□□□□ -2.29
SCN4AP35499 AP002004.2-201ENST00000531656 154 ntBASIC0.72□□□□□ -2.29
SCN4AP35499 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.72□□□□□ -2.29
SCN4AP35499 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.72□□□□□ -2.29
SCN4AP35499 RNU6-222P-201ENST00000362438 107 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 Y_RNA.88-201ENST00000363029 99 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 SNORD68-201ENST00000363214 84 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 Y_RNA.187-201ENST00000363918 113 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 Y_RNA.387-201ENST00000383918 102 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 MIR660-201ENST00000385235 97 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SCN4AP35499 AC018865.2-201ENST00000423631 129 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 AC099513.1-201ENST00000490423 301 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 OR9P1P-201ENST00000496431 281 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 UBL5P1-201ENST00000507979 193 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 SNORA31.10-201ENST00000516482 106 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 AC023932.2-201ENST00000603176 175 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 RNU6-801P-201ENST00000364087 105 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 Y_RNA.368-201ENST00000365547 113 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
SCN4AP35499 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.71□□□□□ -2.3
SCN4AP35499 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 PIGPP3-201ENST00000425307 415 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 PRDX4P1-201ENST00000507189 574 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 RNU6-699P-201ENST00000517081 110 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 AC022616.4-201ENST00000522985 181 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 MIR4762-201ENST00000585261 75 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
SCN4AP35499 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 SNORD3E-202ENST00000627253 216 ntBASIC0.71□□□□□ -2.3
SCN4AP35499 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SCN4AP35499 RNU6-874P-201ENST00000362390 105 ntBASIC0.7□□□□□ -2.3
SCN4AP35499 RNU6-117P-201ENST00000365415 107 ntBASIC0.7□□□□□ -2.3
SCN4AP35499 AC093019.1-201ENST00000443135 252 ntBASIC0.7□□□□□ -2.3
SCN4AP35499 RNU7-152P-201ENST00000458982 64 ntBASIC0.7□□□□□ -2.3
SCN4AP35499 AC018710.1-201ENST00000506509 158 ntBASIC0.7□□□□□ -2.3
SCN4AP35499 Y_RNA.714-201ENST00000517065 90 ntBASIC0.7□□□□□ -2.3
SCN4AP35499 AC084782.3-201ENST00000612282 578 ntBASIC0.7□□□□□ -2.3
SCN4AP35499 MIR3674-201ENST00000636576 68 ntBASIC0.7□□□□□ -2.3
SCN4AP35499 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SCN4AP35499 Y_RNA.80-201ENST00000362996 102 ntBASIC0.69□□□□□ -2.3
SCN4AP35499 RNU6-439P-201ENST00000384188 106 ntBASIC0.69□□□□□ -2.3
SCN4AP35499 Y_RNA.485-201ENST00000384395 102 ntBASIC0.69□□□□□ -2.3
SCN4AP35499 Y_RNA.505-201ENST00000384489 102 ntBASIC0.69□□□□□ -2.3
SCN4AP35499 MIR520G-201ENST00000385064 90 ntBASIC0.69□□□□□ -2.3
SCN4AP35499 AL034345.1-201ENST00000407768 123 ntBASIC0.69□□□□□ -2.3
SCN4AP35499 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms