Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC018630.2-201ENST00000534866 2403 ntBASIC3.37□□□□□ -1.87
IFT43Q96FT9 SNORA1-201ENST00000384107 130 ntBASIC3.37□□□□□ -1.87
IFT43Q96FT9 NDUFB4P4-201ENST00000404822 243 ntBASIC3.37□□□□□ -1.87
IFT43Q96FT9 MIR1263-201ENST00000408324 86 ntBASIC3.37□□□□□ -1.87
IFT43Q96FT9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.37□□□□□ -1.87
IFT43Q96FT9 SNRPGP10-201ENST00000432323 225 ntBASIC3.37□□□□□ -1.87
IFT43Q96FT9 MRPS17P9-201ENST00000511924 393 ntBASIC3.37□□□□□ -1.87
IFT43Q96FT9 RNA5SP236-201ENST00000516169 116 ntBASIC3.37□□□□□ -1.87
IFT43Q96FT9 RNU6-1041P-201ENST00000516254 102 ntBASIC3.37□□□□□ -1.87
IFT43Q96FT9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.37□□□□□ -1.87
IFT43Q96FT9 MIR7112-201ENST00000616126 65 ntBASIC3.37□□□□□ -1.87
IFT43Q96FT9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
IFT43Q96FT9 MIR450A1-201ENST00000362262 91 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 Y_RNA.253-201ENST00000364562 112 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 SNORD24-201ENST00000383884 75 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 SNORD21-201ENST00000383953 95 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 Y_RNA.528-201ENST00000384575 108 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 MIR592-201ENST00000384959 97 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 RNA5SP467-201ENST00000391274 118 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 RNA5SP136-201ENST00000410906 107 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 AL353689.1-201ENST00000438895 199 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 RNA5SP385-201ENST00000515947 110 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 RNU1-143P-201ENST00000516296 146 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 RNU6-1291P-201ENST00000516591 104 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 IGKV1-22-201ENST00000524313 326 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 MIR5680-201ENST00000577577 84 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 MIR5004-201ENST00000579078 107 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 MIR5582-201ENST00000579697 68 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 U1.23-201ENST00000610293 146 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 uc_338.1-201ENST00000612113 180 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 RNU1-68P-201ENST00000615382 146 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 U1.39-201ENST00000621562 146 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 MIR6079-201ENST00000635807 62 ntBASIC3.36□□□□□ -1.87
IFT43Q96FT9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
IFT43Q96FT9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.35□□□□□ -1.87
IFT43Q96FT9 RNU6-888P-201ENST00000363010 101 ntBASIC3.35□□□□□ -1.87
IFT43Q96FT9 Y_RNA.281-201ENST00000364774 94 ntBASIC3.35□□□□□ -1.87
IFT43Q96FT9 SNORA12.1-201ENST00000390873 148 ntBASIC3.35□□□□□ -1.87
IFT43Q96FT9 RNU6-220P-201ENST00000390919 107 ntBASIC3.35□□□□□ -1.87
IFT43Q96FT9 RN7SKP123-201ENST00000410732 291 ntBASIC3.35□□□□□ -1.87
IFT43Q96FT9 RNU4-47P-201ENST00000410876 114 ntBASIC3.35□□□□□ -1.87
IFT43Q96FT9 CST9LP2-201ENST00000437612 320 ntBASIC3.35□□□□□ -1.87
IFT43Q96FT9 AC018868.1-201ENST00000491307 315 ntBASIC3.35□□□□□ -1.87
IFT43Q96FT9 AC096725.1-201ENST00000514266 313 ntBASIC3.35□□□□□ -1.87
IFT43Q96FT9 RNU6-341P-201ENST00000516973 96 ntBASIC3.35□□□□□ -1.87
IFT43Q96FT9 AL358944.1-201ENST00000528537 144 ntBASIC3.35□□□□□ -1.87
IFT43Q96FT9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.35□□□□□ -1.87
IFT43Q96FT9 MIR338-201ENST00000636369 67 ntBASIC3.35□□□□□ -1.87
IFT43Q96FT9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.35□□□□□ -1.87
IFT43Q96FT9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
IFT43Q96FT9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
IFT43Q96FT9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
IFT43Q96FT9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
IFT43Q96FT9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
IFT43Q96FT9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
IFT43Q96FT9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
IFT43Q96FT9 SNORD61-201ENST00000384252 73 ntBASIC3.34□□□□□ -1.87
IFT43Q96FT9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
IFT43Q96FT9 SNORA48.8-201ENST00000391324 134 ntBASIC3.34□□□□□ -1.87
IFT43Q96FT9 AC007064.1-201ENST00000412238 351 ntBASIC3.34□□□□□ -1.87
IFT43Q96FT9 SRIP3-201ENST00000413200 219 ntBASIC3.34□□□□□ -1.87
IFT43Q96FT9 EDDM3CP-201ENST00000415977 425 ntBASIC3.34□□□□□ -1.87
IFT43Q96FT9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.34□□□□□ -1.87
IFT43Q96FT9 AC003685.2-201ENST00000422795 395 ntBASIC3.34□□□□□ -1.87
IFT43Q96FT9 RNU1-142P-201ENST00000516682 145 ntBASIC3.34□□□□□ -1.87
IFT43Q96FT9 Y_RNA.714-201ENST00000517065 90 ntBASIC3.34□□□□□ -1.87
IFT43Q96FT9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.34□□□□□ -1.87
IFT43Q96FT9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.34□□□□□ -1.87
IFT43Q96FT9 MIR4506-201ENST00000584693 77 ntBASIC3.34□□□□□ -1.87
IFT43Q96FT9 AL353149.1-201ENST00000610667 244 ntBASIC3.34□□□□□ -1.87
IFT43Q96FT9 uc_338.28-201ENST00000612082 187 ntBASIC3.34□□□□□ -1.87
IFT43Q96FT9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
IFT43Q96FT9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
IFT43Q96FT9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
IFT43Q96FT9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
IFT43Q96FT9 Y_RNA.267-201ENST00000364679 109 ntBASIC3.33□□□□□ -1.88
IFT43Q96FT9 Y_RNA.369-201ENST00000365568 117 ntBASIC3.33□□□□□ -1.88
IFT43Q96FT9 RNU6-106P-201ENST00000384405 107 ntBASIC3.33□□□□□ -1.88
IFT43Q96FT9 AC115115.1-201ENST00000449927 248 ntBASIC3.33□□□□□ -1.88
IFT43Q96FT9 RN7SL75P-201ENST00000461926 281 ntBASIC3.33□□□□□ -1.88
IFT43Q96FT9 Y_RNA.677-201ENST00000516401 85 ntBASIC3.33□□□□□ -1.88
IFT43Q96FT9 RNU6-537P-201ENST00000517277 103 ntBASIC3.33□□□□□ -1.88
IFT43Q96FT9 AC008507.4-201ENST00000585464 127 ntBASIC3.33□□□□□ -1.88
IFT43Q96FT9 AC087685.1-201ENST00000587507 141 ntBASIC3.33□□□□□ -1.88
IFT43Q96FT9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.33□□□□□ -1.88
IFT43Q96FT9 AC106754.2-201ENST00000623006 233 ntBASIC3.33□□□□□ -1.88
IFT43Q96FT9 AC073476.4-201ENST00000628409 72 ntBASIC3.33□□□□□ -1.88
IFT43Q96FT9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
IFT43Q96FT9 U6.108-201ENST00000637764 58 ntBASIC3.33□□□□□ -1.88
IFT43Q96FT9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.33□□□□□ -1.88
IFT43Q96FT9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
IFT43Q96FT9 ZNF271P-202ENST00000465539 1970 ntBASIC3.32□□□□□ -1.88
IFT43Q96FT9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.32□□□□□ -1.88
IFT43Q96FT9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
IFT43Q96FT9 RNA5SP125-201ENST00000364843 120 ntBASIC3.32□□□□□ -1.88
IFT43Q96FT9 MIR634-201ENST00000385208 97 ntBASIC3.32□□□□□ -1.88
IFT43Q96FT9 SNORD72-201ENST00000390994 80 ntBASIC3.32□□□□□ -1.88
IFT43Q96FT9 RNU6-1270P-201ENST00000517128 108 ntBASIC3.32□□□□□ -1.88
IFT43Q96FT9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.32□□□□□ -1.88
IFT43Q96FT9 AC007012.1-201ENST00000567192 175 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms