Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MIR5701-2-201ENST00000615634 82 ntBASIC0.5□□□□□ -2.33
RFC3P40938 AC068700.1-201ENST00000565862 3754 ntBASIC0.5□□□□□ -2.33
RFC3P40938 RNU6-1059P-201ENST00000363752 98 ntBASIC0.49□□□□□ -2.33
RFC3P40938 RNU6-842P-201ENST00000384269 107 ntBASIC0.49□□□□□ -2.33
RFC3P40938 Y_RNA.498-201ENST00000384460 102 ntBASIC0.49□□□□□ -2.33
RFC3P40938 RNU6-373P-201ENST00000411247 98 ntBASIC0.49□□□□□ -2.33
RFC3P40938 PIGPP3-201ENST00000425307 415 ntBASIC0.49□□□□□ -2.33
RFC3P40938 USP9YP30-201ENST00000430729 455 ntBASIC0.49□□□□□ -2.33
RFC3P40938 RPL23AP50-201ENST00000434149 455 ntBASIC0.49□□□□□ -2.33
RFC3P40938 MTND4LP16-201ENST00000440828 295 ntBASIC0.49□□□□□ -2.33
RFC3P40938 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.49□□□□□ -2.33
RFC3P40938 SNORD5.1-201ENST00000458800 75 ntBASIC0.49□□□□□ -2.33
RFC3P40938 MTND4LP26-201ENST00000518144 282 ntBASIC0.49□□□□□ -2.33
RFC3P40938 AC109810.1-201ENST00000534066 224 ntBASIC0.49□□□□□ -2.33
RFC3P40938 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.49□□□□□ -2.33
RFC3P40938 AC024614.3-201ENST00000637860 256 ntBASIC0.49□□□□□ -2.33
RFC3P40938 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
RFC3P40938 Y_RNA.51-201ENST00000362725 102 ntBASIC0.48□□□□□ -2.33
RFC3P40938 RNU6-454P-201ENST00000364292 107 ntBASIC0.48□□□□□ -2.33
RFC3P40938 U8.5-201ENST00000364528 136 ntBASIC0.48□□□□□ -2.33
RFC3P40938 Y_RNA.364-201ENST00000365532 101 ntBASIC0.48□□□□□ -2.33
RFC3P40938 MIR190B-201ENST00000401119 79 ntBASIC0.48□□□□□ -2.33
RFC3P40938 SNORD99-201ENST00000408612 74 ntBASIC0.48□□□□□ -2.33
RFC3P40938 AC114811.1-201ENST00000507207 168 ntBASIC0.48□□□□□ -2.33
RFC3P40938 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.48□□□□□ -2.33
RFC3P40938 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
RFC3P40938 RNU6-1110P-201ENST00000516462 101 ntBASIC0.48□□□□□ -2.33
RFC3P40938 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
RFC3P40938 SNORA74.3-201ENST00000517108 154 ntBASIC0.48□□□□□ -2.33
RFC3P40938 RNU1-54P-201ENST00000517181 120 ntBASIC0.48□□□□□ -2.33
RFC3P40938 AC023827.1-201ENST00000569247 97 ntBASIC0.48□□□□□ -2.33
RFC3P40938 MIR4711-201ENST00000578274 70 ntBASIC0.48□□□□□ -2.33
RFC3P40938 AC090617.10-201ENST00000624308 134 ntBASIC0.48□□□□□ -2.33
RFC3P40938 SNORD68-201ENST00000363214 84 ntBASIC0.47□□□□□ -2.33
RFC3P40938 Y_RNA.243-201ENST00000364481 109 ntBASIC0.47□□□□□ -2.33
RFC3P40938 RNU6-136P-201ENST00000384663 107 ntBASIC0.47□□□□□ -2.33
RFC3P40938 SNORD89-201ENST00000390981 114 ntBASIC0.47□□□□□ -2.33
RFC3P40938 MIR1185-1-201ENST00000408598 86 ntBASIC0.47□□□□□ -2.33
RFC3P40938 MIR1298-201ENST00000408783 112 ntBASIC0.47□□□□□ -2.33
RFC3P40938 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.47□□□□□ -2.33
RFC3P40938 MTND1P17-201ENST00000448961 204 ntBASIC0.47□□□□□ -2.33
RFC3P40938 RPS20P10-201ENST00000451209 253 ntBASIC0.47□□□□□ -2.33
RFC3P40938 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
RFC3P40938 AC023442.1-201ENST00000531247 422 ntBASIC0.47□□□□□ -2.33
RFC3P40938 MIR4762-201ENST00000585261 75 ntBASIC0.47□□□□□ -2.33
RFC3P40938 MIR3674-201ENST00000636576 68 ntBASIC0.47□□□□□ -2.33
RFC3P40938 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
RFC3P40938 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
RFC3P40938 Y_RNA.48-201ENST00000362710 103 ntBASIC0.46□□□□□ -2.34
RFC3P40938 SNORD114-23-201ENST00000363536 72 ntBASIC0.46□□□□□ -2.34
RFC3P40938 SNORD116-1-201ENST00000384335 95 ntBASIC0.46□□□□□ -2.34
RFC3P40938 RNA5SP475-201ENST00000410568 110 ntBASIC0.46□□□□□ -2.34
RFC3P40938 MTCYBP10-201ENST00000424905 650 ntBASIC0.46□□□□□ -2.34
RFC3P40938 MTATP6P17-201ENST00000431030 672 ntBASIC0.46□□□□□ -2.34
RFC3P40938 AC092628.1-201ENST00000436250 252 ntBASIC0.46□□□□□ -2.34
RFC3P40938 UBE2V1P7-201ENST00000446395 340 ntBASIC0.46□□□□□ -2.34
RFC3P40938 MTND1P29-201ENST00000448112 647 ntBASIC0.46□□□□□ -2.34
RFC3P40938 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.46□□□□□ -2.34
RFC3P40938 RNU6-625P-201ENST00000459412 107 ntBASIC0.46□□□□□ -2.34
RFC3P40938 RNU6-1088P-201ENST00000516850 104 ntBASIC0.46□□□□□ -2.34
RFC3P40938 AC009229.3-201ENST00000608056 282 ntBASIC0.46□□□□□ -2.34
RFC3P40938 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
RFC3P40938 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
RFC3P40938 Y_RNA.361-201ENST00000365515 120 ntBASIC0.45□□□□□ -2.34
RFC3P40938 AC117470.1-201ENST00000381974 330 ntBASIC0.45□□□□□ -2.34
RFC3P40938 RNU6-1013P-201ENST00000384180 107 ntBASIC0.45□□□□□ -2.34
RFC3P40938 RNU6-831P-201ENST00000384548 107 ntBASIC0.45□□□□□ -2.34
RFC3P40938 MIR520C-201ENST00000385005 87 ntBASIC0.45□□□□□ -2.34
RFC3P40938 AL354751.2-201ENST00000415471 210 ntBASIC0.45□□□□□ -2.34
RFC3P40938 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.45□□□□□ -2.34
RFC3P40938 DLGAP5P1-201ENST00000430307 464 ntBASIC0.45□□□□□ -2.34
RFC3P40938 MTND3P21-201ENST00000433774 331 ntBASIC0.45□□□□□ -2.34
RFC3P40938 ELOCP24-201ENST00000456370 334 ntBASIC0.45□□□□□ -2.34
RFC3P40938 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
RFC3P40938 RNU7-41P-201ENST00000515917 61 ntBASIC0.45□□□□□ -2.34
RFC3P40938 RNU6-496P-201ENST00000516145 99 ntBASIC0.45□□□□□ -2.34
RFC3P40938 RNU6-63P-201ENST00000516690 95 ntBASIC0.45□□□□□ -2.34
RFC3P40938 RNU6-566P-201ENST00000516790 107 ntBASIC0.45□□□□□ -2.34
RFC3P40938 RNU6-273P-201ENST00000516937 96 ntBASIC0.45□□□□□ -2.34
RFC3P40938 RNU6-1314P-201ENST00000517139 104 ntBASIC0.45□□□□□ -2.34
RFC3P40938 AC109635.3-201ENST00000529536 185 ntBASIC0.45□□□□□ -2.34
RFC3P40938 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
RFC3P40938 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.45□□□□□ -2.34
RFC3P40938 MIR6128-201ENST00000615528 109 ntBASIC0.45□□□□□ -2.34
RFC3P40938 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.45□□□□□ -2.34
RFC3P40938 7SK.10-201ENST00000621414 298 ntBASIC0.45□□□□□ -2.34
RFC3P40938 AL442644.1-201ENST00000454390 3105 ntBASIC0.44□□□□□ -2.34
RFC3P40938 SNORA25.3-201ENST00000363205 127 ntBASIC0.44□□□□□ -2.34
RFC3P40938 RNU6-879P-201ENST00000364328 108 ntBASIC0.44□□□□□ -2.34
RFC3P40938 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
RFC3P40938 Y_RNA.557-201ENST00000384680 107 ntBASIC0.44□□□□□ -2.34
RFC3P40938 MIR136-201ENST00000385207 82 ntBASIC0.44□□□□□ -2.34
RFC3P40938 RNA5SP511-201ENST00000410487 115 ntBASIC0.44□□□□□ -2.34
RFC3P40938 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
RFC3P40938 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.44□□□□□ -2.34
RFC3P40938 RN7SKP164-201ENST00000516138 266 ntBASIC0.44□□□□□ -2.34
RFC3P40938 AC026407.1-201ENST00000518369 204 ntBASIC0.44□□□□□ -2.34
RFC3P40938 AC105029.1-201ENST00000520250 669 ntBASIC0.44□□□□□ -2.34
RFC3P40938 AL136317.1-201ENST00000612653 226 ntBASIC0.44□□□□□ -2.34
RFC3P40938 AL591926.4-201ENST00000616895 298 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms