Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
HCN1O60741 AL133373.1-201ENST00000497098 94 ntBASIC1.06□□□□□ -2.24
HCN1O60741 RNU6-1278P-201ENST00000516130 107 ntBASIC1.06□□□□□ -2.24
HCN1O60741 RNU6-875P-201ENST00000516488 106 ntBASIC1.06□□□□□ -2.24
HCN1O60741 AL355375.2-201ENST00000574825 175 ntBASIC1.06□□□□□ -2.24
HCN1O60741 MIR4778-201ENST00000577635 80 ntBASIC1.06□□□□□ -2.24
HCN1O60741 MIR6734-201ENST00000621166 68 ntBASIC1.06□□□□□ -2.24
HCN1O60741 AL513423.1-201ENST00000621695 132 ntBASIC1.06□□□□□ -2.24
HCN1O60741 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.06□□□□□ -2.24
HCN1O60741 Y_RNA.124-201ENST00000363339 93 ntBASIC1.05□□□□□ -2.24
HCN1O60741 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.05□□□□□ -2.24
HCN1O60741 RNU6-926P-201ENST00000384075 107 ntBASIC1.05□□□□□ -2.24
HCN1O60741 RNU6-505P-201ENST00000384427 107 ntBASIC1.05□□□□□ -2.24
HCN1O60741 MIR562-201ENST00000384894 95 ntBASIC1.05□□□□□ -2.24
HCN1O60741 MIR660-201ENST00000385235 97 ntBASIC1.05□□□□□ -2.24
HCN1O60741 RNU6-1009P-201ENST00000390996 107 ntBASIC1.05□□□□□ -2.24
HCN1O60741 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.05□□□□□ -2.24
HCN1O60741 AC093019.1-201ENST00000443135 252 ntBASIC1.05□□□□□ -2.24
HCN1O60741 FCF1P4-201ENST00000448326 183 ntBASIC1.05□□□□□ -2.24
HCN1O60741 RPL39P38-201ENST00000467018 153 ntBASIC1.05□□□□□ -2.24
HCN1O60741 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.05□□□□□ -2.24
HCN1O60741 RNU6-911P-201ENST00000516523 104 ntBASIC1.05□□□□□ -2.24
HCN1O60741 RN7SKP88-201ENST00000516847 250 ntBASIC1.05□□□□□ -2.24
HCN1O60741 RNU6-341P-201ENST00000516973 96 ntBASIC1.05□□□□□ -2.24
HCN1O60741 RNU6-699P-201ENST00000517081 110 ntBASIC1.05□□□□□ -2.24
HCN1O60741 RNU6-165P-201ENST00000517170 99 ntBASIC1.05□□□□□ -2.24
HCN1O60741 RNU2-12P-201ENST00000517216 168 ntBASIC1.05□□□□□ -2.24
HCN1O60741 AC091178.2-201ENST00000584401 117 ntBASIC1.05□□□□□ -2.24
HCN1O60741 SNORA28-201ENST00000606769 126 ntBASIC1.05□□□□□ -2.24
HCN1O60741 7SK.8-201ENST00000612110 250 ntBASIC1.05□□□□□ -2.24
HCN1O60741 7SK.11-201ENST00000615477 250 ntBASIC1.05□□□□□ -2.24
HCN1O60741 AC004467.1-201ENST00000615678 330 ntBASIC1.05□□□□□ -2.24
HCN1O60741 U2.1-201ENST00000618978 145 ntBASIC1.05□□□□□ -2.24
HCN1O60741 7SK.13-201ENST00000622040 250 ntBASIC1.05□□□□□ -2.24
HCN1O60741 AC138305.3-201ENST00000624988 240 ntBASIC1.05□□□□□ -2.24
HCN1O60741 Y_RNA.263-201ENST00000364659 114 ntBASIC1.04□□□□□ -2.24
HCN1O60741 Y_RNA.267-201ENST00000364679 109 ntBASIC1.04□□□□□ -2.24
HCN1O60741 RNU6-117P-201ENST00000365415 107 ntBASIC1.04□□□□□ -2.24
HCN1O60741 Y_RNA.361-201ENST00000365515 120 ntBASIC1.04□□□□□ -2.24
HCN1O60741 MIR628-201ENST00000385229 95 ntBASIC1.04□□□□□ -2.24
HCN1O60741 SNORD78.2-201ENST00000391076 69 ntBASIC1.04□□□□□ -2.24
HCN1O60741 MTCO2P27-201ENST00000420740 428 ntBASIC1.04□□□□□ -2.24
HCN1O60741 CALM2P4-201ENST00000430810 426 ntBASIC1.04□□□□□ -2.24
HCN1O60741 DYNLT3P2-201ENST00000442517 295 ntBASIC1.04□□□□□ -2.24
HCN1O60741 MTND5P20-201ENST00000448677 143 ntBASIC1.04□□□□□ -2.24
HCN1O60741 RNU7-152P-201ENST00000458982 64 ntBASIC1.04□□□□□ -2.24
HCN1O60741 Y_RNA.632-201ENST00000459189 102 ntBASIC1.04□□□□□ -2.24
HCN1O60741 AC093852.1-201ENST00000503587 266 ntBASIC1.04□□□□□ -2.24
HCN1O60741 AC023442.1-201ENST00000531247 422 ntBASIC1.04□□□□□ -2.24
HCN1O60741 AC055872.1-201ENST00000570978 278 ntBASIC1.04□□□□□ -2.24
HCN1O60741 MIR548S-201ENST00000581352 82 ntBASIC1.04□□□□□ -2.24
HCN1O60741 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
HCN1O60741 AC084781.2-201ENST00000615568 161 ntBASIC1.04□□□□□ -2.24
HCN1O60741 AC127459.3-201ENST00000624328 466 ntBASIC1.04□□□□□ -2.24
HCN1O60741 AC068647.2-201ENST00000637380 353 ntBASIC1.04□□□□□ -2.24
HCN1O60741 SNORA1B-201ENST00000362535 133 ntBASIC1.03□□□□□ -2.24
HCN1O60741 Y_RNA.187-201ENST00000363918 113 ntBASIC1.03□□□□□ -2.24
HCN1O60741 SNORD115-30-201ENST00000364117 82 ntBASIC1.03□□□□□ -2.24
HCN1O60741 Y_RNA.265-201ENST00000364677 108 ntBASIC1.03□□□□□ -2.24
HCN1O60741 Y_RNA.466-201ENST00000384294 113 ntBASIC1.03□□□□□ -2.24
HCN1O60741 Y_RNA.529-201ENST00000384586 119 ntBASIC1.03□□□□□ -2.24
HCN1O60741 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
HCN1O60741 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.03□□□□□ -2.24
HCN1O60741 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.03□□□□□ -2.24
HCN1O60741 SNORD19B-201ENST00000459623 84 ntBASIC1.03□□□□□ -2.24
HCN1O60741 COX6CP14-201ENST00000469580 174 ntBASIC1.03□□□□□ -2.24
HCN1O60741 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
HCN1O60741 RNU6-1291P-201ENST00000516591 104 ntBASIC1.03□□□□□ -2.24
HCN1O60741 RNU6-1012P-201ENST00000516606 109 ntBASIC1.03□□□□□ -2.24
HCN1O60741 RNA5SP168-201ENST00000516642 112 ntBASIC1.03□□□□□ -2.24
HCN1O60741 RNU6-922P-201ENST00000516753 99 ntBASIC1.03□□□□□ -2.24
HCN1O60741 RNU2-56P-201ENST00000516826 190 ntBASIC1.03□□□□□ -2.24
HCN1O60741 Y_RNA.702-201ENST00000516843 96 ntBASIC1.03□□□□□ -2.24
HCN1O60741 AC011604.1-201ENST00000545978 196 ntBASIC1.03□□□□□ -2.24
HCN1O60741 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.03□□□□□ -2.24
HCN1O60741 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.03□□□□□ -2.24
HCN1O60741 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.03□□□□□ -2.24
HCN1O60741 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
HCN1O60741 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
HCN1O60741 AC005592.1-201ENST00000566527 1640 ntBASIC1.03□□□□□ -2.24
HCN1O60741 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
HCN1O60741 Y_RNA.27-201ENST00000362540 103 ntBASIC1.02□□□□□ -2.25
HCN1O60741 RNU4-76P-201ENST00000364509 141 ntBASIC1.02□□□□□ -2.25
HCN1O60741 Y_RNA.428-201ENST00000384078 102 ntBASIC1.02□□□□□ -2.25
HCN1O60741 Y_RNA.463-201ENST00000384271 102 ntBASIC1.02□□□□□ -2.25
HCN1O60741 RNU6-424P-201ENST00000384367 105 ntBASIC1.02□□□□□ -2.25
HCN1O60741 U8.16-201ENST00000391279 133 ntBASIC1.02□□□□□ -2.25
HCN1O60741 RNU5A-5P-201ENST00000411054 116 ntBASIC1.02□□□□□ -2.25
HCN1O60741 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.02□□□□□ -2.25
HCN1O60741 OR9P1P-201ENST00000496431 281 ntBASIC1.02□□□□□ -2.25
HCN1O60741 RNU6-507P-201ENST00000516045 100 ntBASIC1.02□□□□□ -2.25
HCN1O60741 RNU7-28P-201ENST00000516759 62 ntBASIC1.02□□□□□ -2.25
HCN1O60741 RNA5SP404-201ENST00000517118 132 ntBASIC1.02□□□□□ -2.25
HCN1O60741 AP002004.2-201ENST00000531656 154 ntBASIC1.02□□□□□ -2.25
HCN1O60741 HSPE1P19-201ENST00000603327 295 ntBASIC1.02□□□□□ -2.25
HCN1O60741 AC006380.1-201ENST00000603598 186 ntBASIC1.02□□□□□ -2.25
HCN1O60741 Y_RNA.101-201ENST00000363154 102 ntBASIC1.01□□□□□ -2.25
HCN1O60741 Y_RNA.356-201ENST00000365475 113 ntBASIC1.01□□□□□ -2.25
HCN1O60741 RNU6-20P-201ENST00000384106 107 ntBASIC1.01□□□□□ -2.25
HCN1O60741 RNU6-136P-201ENST00000384663 107 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms