Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.47□□□□□ -1.85
TMEM88BA6NKF7 RNU6-1130P-201ENST00000365434 107 ntBASIC3.46□□□□□ -1.86
TMEM88BA6NKF7 Y_RNA.587-201ENST00000391210 103 ntBASIC3.46□□□□□ -1.86
TMEM88BA6NKF7 CST2P1-201ENST00000425770 87 ntBASIC3.46□□□□□ -1.86
TMEM88BA6NKF7 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.46□□□□□ -1.86
TMEM88BA6NKF7 RNU6-346P-201ENST00000516288 111 ntBASIC3.46□□□□□ -1.86
TMEM88BA6NKF7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.46□□□□□ -1.86
TMEM88BA6NKF7 AC018630.2-201ENST00000534866 2403 ntBASIC3.46□□□□□ -1.86
TMEM88BA6NKF7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
TMEM88BA6NKF7 AC100821.1-201ENST00000523153 2479 ntBASIC3.46□□□□□ -1.86
TMEM88BA6NKF7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 RNU6-199P-201ENST00000362954 107 ntBASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 RNU6-23P-201ENST00000363283 107 ntBASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 RNU6-151P-201ENST00000364158 107 ntBASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 SNORA26-201ENST00000391286 122 ntBASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 RNU4-43P-201ENST00000410628 137 ntBASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 RN7SKP192-201ENST00000411291 327 ntBASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 RNU7-26P-201ENST00000458980 63 ntBASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 RNU7-121P-201ENST00000516604 62 ntBASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 RNU6-548P-201ENST00000517083 115 ntBASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 CYCSP26-201ENST00000534107 320 ntBASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TMEM88BA6NKF7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 Y_RNA.242-201ENST00000364473 110 ntBASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 Y_RNA.521-201ENST00000384560 114 ntBASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 MIR9-1-201ENST00000385198 89 ntBASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 MIR764-201ENST00000390811 85 ntBASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 MIR513C-201ENST00000401352 84 ntBASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 MIR1262-201ENST00000408276 93 ntBASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 AL591806.2-201ENST00000433122 173 ntBASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 MIR2276-201ENST00000516886 89 ntBASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 Y_RNA.714-201ENST00000517065 90 ntBASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 IGKV3-31-201ENST00000523109 329 ntBASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 MIR4738-201ENST00000579134 87 ntBASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 AL929325.1-201ENST00000603096 117 ntBASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 MIR7111-201ENST00000619751 72 ntBASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TMEM88BA6NKF7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TMEM88BA6NKF7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TMEM88BA6NKF7 AC073325.2-201ENST00000339545 159 ntBASIC3.43□□□□□ -1.86
TMEM88BA6NKF7 SNORA19-201ENST00000384737 128 ntBASIC3.43□□□□□ -1.86
TMEM88BA6NKF7 SNORD37.2-201ENST00000391075 66 ntBASIC3.43□□□□□ -1.86
TMEM88BA6NKF7 AL358944.1-201ENST00000528537 144 ntBASIC3.43□□□□□ -1.86
TMEM88BA6NKF7 RPL23AP91-201ENST00000569211 455 ntBASIC3.43□□□□□ -1.86
TMEM88BA6NKF7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TMEM88BA6NKF7 Y_RNA.215-201ENST00000364204 112 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 SNORD114-6-201ENST00000364393 72 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 Y_RNA.432-201ENST00000384087 111 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 SNORA8-201ENST00000384574 139 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 RNA5SP467-201ENST00000391274 118 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 RPS27P1-201ENST00000450552 247 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 AC233266.1-201ENST00000454518 96 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 RNU6-1299P-201ENST00000516316 100 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 RNA5SP148-201ENST00000516527 94 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 MIR4662B-201ENST00000579498 81 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 AC242852.1-201ENST00000612151 96 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 AC244015.1-201ENST00000622301 99 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 MIR6079-201ENST00000635807 62 ntBASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.42□□□□□ -1.86
TMEM88BA6NKF7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 AC131280.1-202ENST00000624067 4211 ntBASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 RNA5SP493-201ENST00000364115 91 ntBASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 SNORA9.2-201ENST00000365361 133 ntBASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 Y_RNA.622-201ENST00000411091 108 ntBASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 RPPH1-2P-201ENST00000516688 293 ntBASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 RNU6-341P-201ENST00000516973 96 ntBASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 RNU6-56P-201ENST00000516986 93 ntBASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 MIR3646-201ENST00000578301 84 ntBASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 AL049861.1-201ENST00000603130 150 ntBASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 AL021707.8-201ENST00000609428 183 ntBASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 uc_338.4-201ENST00000616635 176 ntBASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TMEM88BA6NKF7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TMEM88BA6NKF7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TMEM88BA6NKF7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TMEM88BA6NKF7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TMEM88BA6NKF7 AL157777.2-201ENST00000258070 137 ntBASIC3.4□□□□□ -1.87
TMEM88BA6NKF7 RNU1-35P-201ENST00000362782 153 ntBASIC3.4□□□□□ -1.87
TMEM88BA6NKF7 SNORD45.3-201ENST00000363836 72 ntBASIC3.4□□□□□ -1.87
TMEM88BA6NKF7 Y_RNA.497-201ENST00000384447 98 ntBASIC3.4□□□□□ -1.87
TMEM88BA6NKF7 SNORD116-25-201ENST00000516517 92 ntBASIC3.4□□□□□ -1.87
TMEM88BA6NKF7 MIR548X2-201ENST00000579776 100 ntBASIC3.4□□□□□ -1.87
TMEM88BA6NKF7 AC091895.1-201ENST00000624494 256 ntBASIC3.4□□□□□ -1.87
TMEM88BA6NKF7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.4□□□□□ -1.87
TMEM88BA6NKF7 ZNF271P-202ENST00000465539 1970 ntBASIC3.4□□□□□ -1.87
TMEM88BA6NKF7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TMEM88BA6NKF7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.39□□□□□ -1.87
TMEM88BA6NKF7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
TMEM88BA6NKF7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms