Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.81□□□□□ -1.96
SHISA3A0PJX4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 RNU6-1291P-201ENST00000516591 104 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 AC026403.1-201ENST00000518938 295 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 MIR4444-1-201ENST00000581696 74 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 MIR4444-2-201ENST00000584390 74 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 AC008507.4-201ENST00000585464 127 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 AL670379.3-201ENST00000605040 251 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 U4atac.1-201ENST00000618345 95 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHISA3A0PJX4 ZNF271P-202ENST00000465539 1970 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHISA3A0PJX4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHISA3A0PJX4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHISA3A0PJX4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHISA3A0PJX4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHISA3A0PJX4 RNU4-35P-201ENST00000362588 141 ntBASIC2.8□□□□□ -1.96
SHISA3A0PJX4 RNU6-888P-201ENST00000363010 101 ntBASIC2.8□□□□□ -1.96
SHISA3A0PJX4 RNU6-160P-201ENST00000384591 107 ntBASIC2.8□□□□□ -1.96
SHISA3A0PJX4 MIR181B1-201ENST00000385240 110 ntBASIC2.8□□□□□ -1.96
SHISA3A0PJX4 RNA5SP171-201ENST00000391071 115 ntBASIC2.8□□□□□ -1.96
SHISA3A0PJX4 RNA5SP467-201ENST00000391274 118 ntBASIC2.8□□□□□ -1.96
SHISA3A0PJX4 RN7SL807P-201ENST00000470923 297 ntBASIC2.8□□□□□ -1.96
SHISA3A0PJX4 RPS26P45-201ENST00000471748 340 ntBASIC2.8□□□□□ -1.96
SHISA3A0PJX4 CYCTP-201ENST00000504253 315 ntBASIC2.8□□□□□ -1.96
SHISA3A0PJX4 AC007536.1-201ENST00000533382 349 ntBASIC2.8□□□□□ -1.96
SHISA3A0PJX4 U6.108-201ENST00000637764 58 ntBASIC2.8□□□□□ -1.96
SHISA3A0PJX4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.8□□□□□ -1.96
SHISA3A0PJX4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.8□□□□□ -1.96
SHISA3A0PJX4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.8□□□□□ -1.96
SHISA3A0PJX4 MAPK10-266ENST00000641066 6555 ntBASIC2.8□□□□□ -1.96
SHISA3A0PJX4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHISA3A0PJX4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.79□□□□□ -1.96
SHISA3A0PJX4 RNU6-309P-201ENST00000364573 106 ntBASIC2.79□□□□□ -1.96
SHISA3A0PJX4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.79□□□□□ -1.96
SHISA3A0PJX4 CST2P1-201ENST00000425770 87 ntBASIC2.79□□□□□ -1.96
SHISA3A0PJX4 AF228730.3-201ENST00000436691 102 ntBASIC2.79□□□□□ -1.96
SHISA3A0PJX4 SNORD105B-201ENST00000458770 79 ntBASIC2.79□□□□□ -1.96
SHISA3A0PJX4 AC091826.1-201ENST00000514065 313 ntBASIC2.79□□□□□ -1.96
SHISA3A0PJX4 RNU5E-3P-201ENST00000515913 68 ntBASIC2.79□□□□□ -1.96
SHISA3A0PJX4 AP002004.2-201ENST00000531656 154 ntBASIC2.79□□□□□ -1.96
SHISA3A0PJX4 MIR3129-201ENST00000581095 76 ntBASIC2.79□□□□□ -1.96
SHISA3A0PJX4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.79□□□□□ -1.96
SHISA3A0PJX4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHISA3A0PJX4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.79□□□□□ -1.96
SHISA3A0PJX4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHISA3A0PJX4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHISA3A0PJX4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
SHISA3A0PJX4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SHISA3A0PJX4 SNORA63.4-201ENST00000362763 126 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 Y_RNA.267-201ENST00000364679 109 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 RNA5SP125-201ENST00000364843 120 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 SNORA12.1-201ENST00000390873 148 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 RNA5SP323-201ENST00000391094 133 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 AL117342.1-201ENST00000404861 406 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 RPS29P4-201ENST00000414733 161 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 AC091153.1-201ENST00000466297 402 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 AP004217.1-201ENST00000480579 346 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 SNORD33.1-201ENST00000516213 88 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 AL022345.2-201ENST00000606307 135 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 AC019176.2-201ENST00000611579 315 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 AC009093.8-201ENST00000641769 292 ntBASIC2.78□□□□□ -1.96
SHISA3A0PJX4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SHISA3A0PJX4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHISA3A0PJX4 Y_RNA.346-201ENST00000365385 112 ntBASIC2.77□□□□□ -1.97
SHISA3A0PJX4 SNORD61-201ENST00000384252 73 ntBASIC2.77□□□□□ -1.97
SHISA3A0PJX4 MIRLET7F2-201ENST00000385277 83 ntBASIC2.77□□□□□ -1.97
SHISA3A0PJX4 SNORD72-201ENST00000390994 80 ntBASIC2.77□□□□□ -1.97
SHISA3A0PJX4 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.77□□□□□ -1.97
SHISA3A0PJX4 RN7SKP284-201ENST00000411002 343 ntBASIC2.77□□□□□ -1.97
SHISA3A0PJX4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.77□□□□□ -1.97
SHISA3A0PJX4 AC009238.1-201ENST00000442165 424 ntBASIC2.77□□□□□ -1.97
SHISA3A0PJX4 SNRPGP13-201ENST00000442212 177 ntBASIC2.77□□□□□ -1.97
SHISA3A0PJX4 AC009237.6-201ENST00000446969 424 ntBASIC2.77□□□□□ -1.97
SHISA3A0PJX4 RN7SKP43-201ENST00000516173 320 ntBASIC2.77□□□□□ -1.97
SHISA3A0PJX4 MIR2682-201ENST00000580305 110 ntBASIC2.77□□□□□ -1.97
SHISA3A0PJX4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHISA3A0PJX4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SHISA3A0PJX4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.76□□□□□ -1.97
SHISA3A0PJX4 AL136360.1-201ENST00000503377 1900 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SHISA3A0PJX4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SHISA3A0PJX4 MIR126-201ENST00000362291 85 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 SNORA1-201ENST00000384107 130 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 SNORA8-201ENST00000384574 139 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 MIR218-2-201ENST00000385006 110 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 MIR548A3-201ENST00000385297 97 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 Y_RNA.630-201ENST00000411370 108 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 FTH1P12-201ENST00000432137 551 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 SCGB1D5P-201ENST00000515134 247 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 RN7SKP19-201ENST00000516016 252 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 RNU6-113P-201ENST00000516653 101 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 RN7SKP282-201ENST00000516824 299 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.76□□□□□ -1.97
SHISA3A0PJX4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.76□□□□□ -1.97
SHISA3A0PJX4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.76□□□□□ -1.97
SHISA3A0PJX4 AC108081.1-201ENST00000604358 221 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 AC004832.5-201ENST00000608677 401 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms