Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 RNU2-1-201ENST00000618664 191 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 U2.6-201ENST00000619225 191 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 U2.5-201ENST00000619465 191 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 U2.10-201ENST00000620268 191 ntBASIC1.91□□□□□ -2.1
SLC52A3Q9NQ40 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SLC52A3Q9NQ40 SNORD81.1-201ENST00000363064 77 ntBASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.332-201ENST00000365271 113 ntBASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 RNU4-52P-201ENST00000384209 138 ntBASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-1026P-201ENST00000384465 108 ntBASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 RNA5SP489-201ENST00000410986 109 ntBASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 TRBVB-201ENST00000477100 408 ntBASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 HMGB3P17-201ENST00000504195 649 ntBASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 MIR6840-201ENST00000611937 71 ntBASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 AC022202.1-201ENST00000613515 211 ntBASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 AL590240.4-201ENST00000616908 390 ntBASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.9□□□□□ -2.11
SLC52A3Q9NQ40 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.16-201ENST00000362421 102 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-743P-201ENST00000364151 106 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-975P-201ENST00000384296 105 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 SNORD14D-201ENST00000384390 87 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 MIR518A2-201ENST00000384966 87 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 AL357139.1-201ENST00000407792 426 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 MIR1302-6-201ENST00000408466 90 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 MIR1185-2-201ENST00000408687 86 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.602-201ENST00000410535 92 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 AL390729.2-201ENST00000416137 156 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 RPL23AP3-201ENST00000453844 468 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 AC010531.2-201ENST00000465012 153 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 AC093259.1-201ENST00000509755 300 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-991P-201ENST00000516168 107 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-107P-201ENST00000516643 102 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 SNORD113-5-201ENST00000607261 78 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 AC011373.1-201ENST00000607270 237 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 AC004467.1-201ENST00000615678 330 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 AC010615.1-201ENST00000594254 1764 ntBASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SLC52A3Q9NQ40 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 AL596028.1-201ENST00000326971 197 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.288-201ENST00000364854 92 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-290P-201ENST00000365212 101 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-1310P-201ENST00000384153 107 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.446-201ENST00000384178 104 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.562-201ENST00000384695 113 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 SNORA11.4-201ENST00000408823 129 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 RNU2-54P-201ENST00000410299 190 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 RNU2-38P-201ENST00000410856 79 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 AC139712.2-201ENST00000424302 339 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 MTCO1P44-201ENST00000441935 243 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 SNORD127-201ENST00000458892 86 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 RNU7-110P-201ENST00000516891 62 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 MIR4753-201ENST00000585119 83 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 AC005828.6-201ENST00000606610 232 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.783-201ENST00000613546 102 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 AC008555.8-201ENST00000623602 2168 ntBASIC1.88□□□□□ -2.11
SLC52A3Q9NQ40 RNU4-90P-201ENST00000362773 141 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.99-201ENST00000363138 105 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.237-201ENST00000364439 102 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 SNORA72.2-201ENST00000365028 127 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.331-201ENST00000365267 102 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.361-201ENST00000365515 120 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.401-201ENST00000383965 117 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-21P-201ENST00000384710 107 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 RNA5SP465-201ENST00000391195 109 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 AC123900.1-201ENST00000420390 96 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 AC096920.1-201ENST00000423991 241 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 AC016717.1-201ENST00000448918 286 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 AC005042.3-201ENST00000453230 174 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 RNU7-57P-201ENST00000459540 60 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-221P-201ENST00000459541 99 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 AC114982.1-201ENST00000469402 321 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 SEPT14P8-201ENST00000508026 178 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-1338P-201ENST00000516328 91 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 MIR4524B-201ENST00000581569 115 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 AC062037.2-201ENST00000610137 73 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC52A3Q9NQ40 AC092881.1-201ENST00000638218 2733 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 MIR335-201ENST00000362173 94 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 SNORD115-30-201ENST00000364117 82 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms