Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 BCRP9-201ENST00000605312 388 ntBASIC-0.19□□□□□ -2.44
ABCA4P78363 AC018462.2-201ENST00000605375 395 ntBASIC-0.19□□□□□ -2.44
ABCA4P78363 AC138749.5-201ENST00000611461 208 ntBASIC-0.19□□□□□ -2.44
ABCA4P78363 uc_338.11-201ENST00000619132 160 ntBASIC-0.19□□□□□ -2.44
ABCA4P78363 SCARNA4-201ENST00000629045 128 ntBASIC-0.19□□□□□ -2.44
ABCA4P78363 SNORA1B-201ENST00000362535 133 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 RNA5SP48-201ENST00000363969 126 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 RNU6-396P-201ENST00000365369 105 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 SNORA8.2-201ENST00000384372 139 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 AC007283.2-201ENST00000424739 197 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.2□□□□□ -2.44
ABCA4P78363 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.2□□□□□ -2.44
ABCA4P78363 AC005002.2-201ENST00000438228 269 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 ELOCP24-201ENST00000456370 334 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 RNU7-182P-201ENST00000459009 62 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 AC008628.2-201ENST00000502605 298 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 RNU7-161P-201ENST00000517289 62 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.2□□□□□ -2.44
ABCA4P78363 AC023050.3-201ENST00000541142 333 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 AC007012.1-201ENST00000567192 175 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 MIR378D2-201ENST00000580636 98 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 RMST_3.1-201ENST00000611651 109 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 AL591926.4-201ENST00000616895 298 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 AC244669.1-204ENST00000621564 178 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 MIR4320-201ENST00000636981 65 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 RNU6-490P-201ENST00000362985 107 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 SNORA33-201ENST00000363664 130 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 RNY4P6-201ENST00000363667 96 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.2□□□□□ -2.44
ABCA4P78363 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 MIR106A-201ENST00000384870 81 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 MIR452-201ENST00000385020 85 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 MT-TQ-201ENST00000387372 72 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 MTCO2P33-201ENST00000402100 465 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 SNORD100-201ENST00000408573 76 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 AL117351.1-201ENST00000438864 766 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 AC010486.3-201ENST00000511602 785 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 RNU7-12P-201ENST00000516030 62 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 AC105185.1-201ENST00000518705 535 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.2□□□□□ -2.44
ABCA4P78363 RNU6-1192P-201ENST00000612197 107 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 MIR8064-201ENST00000612863 90 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 RNU6-489P-201ENST00000618289 107 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 FTX_2.1-201ENST00000618816 94 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 AL163152.1-201ENST00000642001 374 ntBASIC-0.2□□□□□ -2.44
ABCA4P78363 SNORD115-8-201ENST00000363856 82 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 RNA5SP275-201ENST00000363936 118 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 SNORA1.1-201ENST00000364671 133 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 SNORD115-38-201ENST00000365037 82 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 RNU6-692P-201ENST00000384496 107 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 RNU6-602P-201ENST00000411155 105 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 HLA-S-202ENST00000425174 53 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 USP9YP29-201ENST00000445112 563 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 AC109327.2-201ENST00000448339 378 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.21□□□□□ -2.44
ABCA4P78363 AC005178.1-201ENST00000508392 440 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 HSPE1P23-201ENST00000509838 286 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 AC026782.1-201ENST00000512952 449 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.21□□□□□ -2.44
ABCA4P78363 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 AL596327.1-201ENST00000603629 213 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 AC006504.8-201ENST00000621046 635 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 AP002371.2-201ENST00000624450 503 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.21□□□□□ -2.44
ABCA4P78363 RNU6-424P-201ENST00000384367 105 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 RNU6-376P-201ENST00000384731 106 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 MIR520C-201ENST00000385005 87 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 MIR1298-201ENST00000408783 112 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 RNU6-607P-201ENST00000411283 108 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 AL117339.3-201ENST00000418733 162 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 PIGPP3-201ENST00000425307 415 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 AC018710.1-201ENST00000506509 158 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.21□□□□□ -2.44
ABCA4P78363 AC097462.1-201ENST00000514125 324 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 MTND1P35-201ENST00000526739 508 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 MTND4LP25-201ENST00000570218 163 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 AC005776.1-201ENST00000603164 290 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 AC011921.3-201ENST00000605540 361 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.21□□□□□ -2.44
ABCA4P78363 AL008636.1-201ENST00000625038 1018 ntBASIC-0.21□□□□□ -2.44
ABCA4P78363 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.21□□□□□ -2.44
ABCA4P78363 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.21□□□□□ -2.44
ABCA4P78363 RNU6-245P-201ENST00000384020 107 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 RNU6-10P-201ENST00000384036 107 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 SNORA24.1-201ENST00000384401 135 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 MT-TY-201ENST00000387409 66 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 SNORD28B-201ENST00000390993 75 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms