Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
NFKB1P19838 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
NFKB1P19838 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.44□□□□□ -1.86
NFKB1P19838 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NFKB1P19838 RNU6-1292P-201ENST00000383856 107 ntBASIC3.44□□□□□ -1.86
NFKB1P19838 SNORA1-201ENST00000384107 130 ntBASIC3.44□□□□□ -1.86
NFKB1P19838 RNU6-106P-201ENST00000384405 107 ntBASIC3.44□□□□□ -1.86
NFKB1P19838 MIR520G-201ENST00000385064 90 ntBASIC3.44□□□□□ -1.86
NFKB1P19838 MIR591-201ENST00000385290 95 ntBASIC3.44□□□□□ -1.86
NFKB1P19838 AL513477.1-202ENST00000417061 214 ntBASIC3.44□□□□□ -1.86
NFKB1P19838 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.44□□□□□ -1.86
NFKB1P19838 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.44□□□□□ -1.86
NFKB1P19838 RN7SL807P-201ENST00000470923 297 ntBASIC3.44□□□□□ -1.86
NFKB1P19838 AC021205.2-201ENST00000480069 347 ntBASIC3.44□□□□□ -1.86
NFKB1P19838 NDUFA4P2-201ENST00000489989 244 ntBASIC3.44□□□□□ -1.86
NFKB1P19838 SCARNA11.3-201ENST00000517276 130 ntBASIC3.44□□□□□ -1.86
NFKB1P19838 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.44□□□□□ -1.86
NFKB1P19838 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.44□□□□□ -1.86
NFKB1P19838 MIR3158-1-201ENST00000583596 81 ntBASIC3.44□□□□□ -1.86
NFKB1P19838 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.44□□□□□ -1.86
NFKB1P19838 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.44□□□□□ -1.86
NFKB1P19838 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NFKB1P19838 AC034229.5-201ENST00000624258 185 ntBASIC3.44□□□□□ -1.86
NFKB1P19838 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NFKB1P19838 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NFKB1P19838 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.43□□□□□ -1.86
NFKB1P19838 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
NFKB1P19838 AL356274.2-201ENST00000624379 3752 ntBASIC3.43□□□□□ -1.86
NFKB1P19838 MIR208A-201ENST00000362287 71 ntBASIC3.43□□□□□ -1.86
NFKB1P19838 SNORA14A-201ENST00000364773 135 ntBASIC3.43□□□□□ -1.86
NFKB1P19838 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
NFKB1P19838 PTMAP2-201ENST00000397627 327 ntBASIC3.43□□□□□ -1.86
NFKB1P19838 MIR1263-201ENST00000408324 86 ntBASIC3.43□□□□□ -1.86
NFKB1P19838 RN7SKP111-201ENST00000410349 271 ntBASIC3.43□□□□□ -1.86
NFKB1P19838 AP001486.1-201ENST00000463339 476 ntBASIC3.43□□□□□ -1.86
NFKB1P19838 AC010401.1-201ENST00000463867 348 ntBASIC3.43□□□□□ -1.86
NFKB1P19838 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.43□□□□□ -1.86
NFKB1P19838 RNU6-537P-201ENST00000517277 103 ntBASIC3.43□□□□□ -1.86
NFKB1P19838 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.43□□□□□ -1.86
NFKB1P19838 MIR7153-201ENST00000637758 57 ntBASIC3.43□□□□□ -1.86
NFKB1P19838 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NFKB1P19838 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
NFKB1P19838 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NFKB1P19838 AC017071.1-201ENST00000564407 2204 ntBASIC3.42□□□□□ -1.86
NFKB1P19838 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NFKB1P19838 RNU6-525P-201ENST00000363685 104 ntBASIC3.42□□□□□ -1.86
NFKB1P19838 RNU6-554P-201ENST00000410466 106 ntBASIC3.42□□□□□ -1.86
NFKB1P19838 RN7SKP284-201ENST00000411002 343 ntBASIC3.42□□□□□ -1.86
NFKB1P19838 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.42□□□□□ -1.86
NFKB1P19838 MRPS17P9-201ENST00000511924 393 ntBASIC3.42□□□□□ -1.86
NFKB1P19838 RNU6-856P-201ENST00000516959 98 ntBASIC3.42□□□□□ -1.86
NFKB1P19838 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.42□□□□□ -1.86
NFKB1P19838 PRELID2P1-201ENST00000552837 301 ntBASIC3.42□□□□□ -1.86
NFKB1P19838 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.42□□□□□ -1.86
NFKB1P19838 U3.45-201ENST00000607547 219 ntBASIC3.42□□□□□ -1.86
NFKB1P19838 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.42□□□□□ -1.86
NFKB1P19838 UCA1.1-201ENST00000620952 75 ntBASIC3.42□□□□□ -1.86
NFKB1P19838 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.42□□□□□ -1.86
NFKB1P19838 AC106754.2-201ENST00000623006 233 ntBASIC3.42□□□□□ -1.86
NFKB1P19838 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NFKB1P19838 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.42□□□□□ -1.86
NFKB1P19838 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.42□□□□□ -1.86
NFKB1P19838 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.42□□□□□ -1.86
NFKB1P19838 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NFKB1P19838 AC080128.1-201ENST00000474389 1917 ntBASIC3.41□□□□□ -1.86
NFKB1P19838 Y_RNA.528-201ENST00000384575 108 ntBASIC3.41□□□□□ -1.86
NFKB1P19838 AL031121.1-201ENST00000406553 254 ntBASIC3.41□□□□□ -1.86
NFKB1P19838 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NFKB1P19838 MICF-203ENST00000432679 129 ntBASIC3.41□□□□□ -1.86
NFKB1P19838 AC009969.1-201ENST00000438726 172 ntBASIC3.41□□□□□ -1.86
NFKB1P19838 RNU6-113P-201ENST00000516653 101 ntBASIC3.41□□□□□ -1.86
NFKB1P19838 SNORA51-201ENST00000606420 132 ntBASIC3.41□□□□□ -1.86
NFKB1P19838 AC107294.3-201ENST00000609211 526 ntBASIC3.41□□□□□ -1.86
NFKB1P19838 U2.20-201ENST00000613956 192 ntBASIC3.41□□□□□ -1.86
NFKB1P19838 AC110079.1-202ENST00000635213 138 ntBASIC3.41□□□□□ -1.86
NFKB1P19838 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NFKB1P19838 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NFKB1P19838 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NFKB1P19838 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NFKB1P19838 RNU6-1107P-201ENST00000364817 104 ntBASIC3.4□□□□□ -1.87
NFKB1P19838 SNORD24-201ENST00000383884 75 ntBASIC3.4□□□□□ -1.87
NFKB1P19838 RNU6-546P-201ENST00000383991 107 ntBASIC3.4□□□□□ -1.87
NFKB1P19838 MIR490-201ENST00000384865 128 ntBASIC3.4□□□□□ -1.87
NFKB1P19838 MIR200C-201ENST00000384980 68 ntBASIC3.4□□□□□ -1.87
NFKB1P19838 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NFKB1P19838 MIR1253-201ENST00000408273 105 ntBASIC3.4□□□□□ -1.87
NFKB1P19838 RNA5SP136-201ENST00000410906 107 ntBASIC3.4□□□□□ -1.87
NFKB1P19838 CALM2P4-201ENST00000430810 426 ntBASIC3.4□□□□□ -1.87
NFKB1P19838 RPS12P18-201ENST00000442381 270 ntBASIC3.4□□□□□ -1.87
NFKB1P19838 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.4□□□□□ -1.87
NFKB1P19838 AC093010.3-201ENST00000570269 15214 ntBASIC3.4□□□□□ -1.87
NFKB1P19838 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NFKB1P19838 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NFKB1P19838 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NFKB1P19838 RNU1-70P-201ENST00000362618 164 ntBASIC3.39□□□□□ -1.87
NFKB1P19838 RNU6-888P-201ENST00000363010 101 ntBASIC3.39□□□□□ -1.87
NFKB1P19838 RNU1-96P-201ENST00000364163 162 ntBASIC3.39□□□□□ -1.87
NFKB1P19838 SNORD61-201ENST00000384252 73 ntBASIC3.39□□□□□ -1.87
NFKB1P19838 MIR570-201ENST00000384917 97 ntBASIC3.39□□□□□ -1.87
NFKB1P19838 SNORA11.2-201ENST00000408318 127 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms