Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RNU2-31P-201ENST00000516954 155 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 AC008749.1-201ENST00000597650 306 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 U2.14-201ENST00000615943 113 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 AL590808.1-201ENST00000618696 141 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.17□□□□□ -2.06
PKP4Q99569 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.17□□□□□ -2.06
PKP4Q99569 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PKP4Q99569 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
PKP4Q99569 AC005336.3-201ENST00000623833 2679 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PKP4Q99569 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PKP4Q99569 Y_RNA.277-201ENST00000364754 102 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 Y_RNA.331-201ENST00000365267 102 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 SNORA18.2-201ENST00000383865 132 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 RNU6-338P-201ENST00000383888 105 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 RNU6-1310P-201ENST00000384153 107 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 Y_RNA.569-201ENST00000384749 103 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 U3.40-201ENST00000408706 208 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 AL356379.1-201ENST00000414105 126 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.16□□□□□ -2.06
PKP4Q99569 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 AC004386.2-201ENST00000441858 148 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 AC008413.1-201ENST00000511864 177 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 RNU6-344P-201ENST00000516635 111 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 HSPE1P18-201ENST00000517602 280 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.16□□□□□ -2.06
PKP4Q99569 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.16□□□□□ -2.06
PKP4Q99569 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.16□□□□□ -2.06
PKP4Q99569 MIR5006-201ENST00000583027 110 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 RPL17P51-201ENST00000605218 238 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 AC022441.3-201ENST00000605737 136 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 SNORD11B-201ENST00000607707 90 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 AL590240.4-201ENST00000616908 390 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 AC006001.4-201ENST00000622243 395 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.16□□□□□ -2.06
PKP4Q99569 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.15□□□□□ -2.06
PKP4Q99569 AP006437.1-201ENST00000641440 3685 ntBASIC2.15□□□□□ -2.06
PKP4Q99569 RNU6-200P-201ENST00000364743 107 ntBASIC2.15□□□□□ -2.07
PKP4Q99569 RNU6-1274P-201ENST00000384557 107 ntBASIC2.15□□□□□ -2.07
PKP4Q99569 AL135786.1-201ENST00000415892 214 ntBASIC2.15□□□□□ -2.07
PKP4Q99569 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.15□□□□□ -2.07
PKP4Q99569 AC009237.7-201ENST00000447357 229 ntBASIC2.15□□□□□ -2.07
PKP4Q99569 AL137159.1-201ENST00000452808 512 ntBASIC2.15□□□□□ -2.07
PKP4Q99569 AC005042.3-201ENST00000453230 174 ntBASIC2.15□□□□□ -2.07
PKP4Q99569 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.15□□□□□ -2.07
PKP4Q99569 RNA5SP233-201ENST00000459153 113 ntBASIC2.15□□□□□ -2.07
PKP4Q99569 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.15□□□□□ -2.07
PKP4Q99569 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.15□□□□□ -2.07
PKP4Q99569 RNU4-71P-201ENST00000516258 113 ntBASIC2.15□□□□□ -2.07
PKP4Q99569 RNU2-44P-201ENST00000516795 194 ntBASIC2.15□□□□□ -2.07
PKP4Q99569 DEFB131C-201ENST00000528817 165 ntBASIC2.15□□□□□ -2.07
PKP4Q99569 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.15□□□□□ -2.07
PKP4Q99569 AC009779.6-201ENST00000603972 165 ntBASIC2.15□□□□□ -2.07
PKP4Q99569 AC009831.4-201ENST00000620744 325 ntBASIC2.15□□□□□ -2.07
PKP4Q99569 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
PKP4Q99569 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
PKP4Q99569 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PKP4Q99569 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PKP4Q99569 MIR410-201ENST00000362222 80 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 MIRLET7G-201ENST00000362280 84 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 Y_RNA.44-201ENST00000362676 108 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 Y_RNA.65-201ENST00000362846 100 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 RNY1-201ENST00000364228 113 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 Y_RNA.415-201ENST00000384012 112 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 RNA5SP475-201ENST00000410568 110 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 RNU2-48P-201ENST00000410694 191 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 RN7SKP284-201ENST00000411002 343 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 AC004866.1-201ENST00000411748 78 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.14□□□□□ -2.07
PKP4Q99569 POLR2KP2-201ENST00000438155 177 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.14□□□□□ -2.07
PKP4Q99569 RNU6-667P-201ENST00000517186 102 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.14□□□□□ -2.07
PKP4Q99569 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.14□□□□□ -2.07
PKP4Q99569 AC055872.1-201ENST00000570978 278 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 SNORD53-201ENST00000579969 78 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 AC004467.1-201ENST00000615678 330 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 AC064859.1-201ENST00000624741 174 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 AC090517.3-201ENST00000625170 141 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 AC068205.3-201ENST00000636385 468 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 MIR3674-201ENST00000636576 68 ntBASIC2.14□□□□□ -2.07
PKP4Q99569 ZNF720P1-201ENST00000562403 1939 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 SNORA25.1-201ENST00000362326 128 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 Y_RNA.101-201ENST00000363154 102 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 Y_RNA.136-201ENST00000363444 102 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 SNORD32B-201ENST00000364460 84 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 Y_RNA.383-201ENST00000383855 97 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 RNU6-1264P-201ENST00000383891 107 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 RNU6-546P-201ENST00000383991 107 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 Y_RNA.446-201ENST00000384178 104 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 RNU6-514P-201ENST00000384208 107 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 MIR29C-201ENST00000385231 88 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 SNORA12-201ENST00000391162 147 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 AL512604.1-201ENST00000404812 257 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 RN7SKP192-201ENST00000411291 327 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 RNU2-64P-201ENST00000411315 191 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 OOSP1P1-201ENST00000423265 274 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 TRBV12-1-201ENST00000479785 344 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 216.7 ms