Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 RNU6-482P-201ENST00000391068 107 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 MRPL35P1-201ENST00000404272 572 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 MIR1252-201ENST00000408861 65 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 ELOCP21-201ENST00000412558 336 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 TOMM22P2-201ENST00000430735 237 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 RNU1-131P-201ENST00000458943 161 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 RNU6-408P-201ENST00000515910 100 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 RNU6-1045P-201ENST00000516321 107 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 Y_RNA.715-201ENST00000517082 110 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 MIR4448-201ENST00000584360 86 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 AL021879.1-201ENST00000611756 288 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 AC011476.5-201ENST00000615594 130 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 AC240442.1-201ENST00000616055 283 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 snoZ196.1-201ENST00000625269 89 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.98□□□□□ -2.09
KRTCAP3Q53RY4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 SNORD114-6-201ENST00000364393 72 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 RNU6-1264P-201ENST00000383891 107 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 Y_RNA.459-201ENST00000384251 102 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 SNORA64-201ENST00000384674 134 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 RNU6-57P-201ENST00000411348 103 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 MTATP8P1-201ENST00000467115 207 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 HMGN1P10-201ENST00000474557 553 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 SCARNA16.3-201ENST00000516595 184 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 RNU6-856P-201ENST00000516959 98 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 SNORA44.1-201ENST00000517031 108 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 AC136443.5-201ENST00000603741 370 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 AL121655.1-201ENST00000605811 308 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 AL590240.4-201ENST00000616908 390 ntBASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTCAP3Q53RY4 RNA5SP493-201ENST00000364115 91 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 Y_RNA.471-201ENST00000384312 102 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 Y_RNA.551-201ENST00000384661 102 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 snosnR66.1-201ENST00000391095 99 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 MIR1185-2-201ENST00000408687 86 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 RNA5SP501-201ENST00000410990 112 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 RNU6-130P-201ENST00000411112 103 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 RAB28P5-201ENST00000427490 651 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 RPEP5-201ENST00000441137 268 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 MTND5P22-201ENST00000458380 195 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 RNU6-221P-201ENST00000459541 99 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 RPL26P26-201ENST00000480251 434 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 AC010205.1-201ENST00000616668 449 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 AC005336.3-201ENST00000623833 2679 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.1
KRTCAP3Q53RY4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 RNU6-961P-201ENST00000363893 105 ntBASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 SNORA63.7-201ENST00000365579 123 ntBASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 Y_RNA.380-201ENST00000365663 111 ntBASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 RNU6-1310P-201ENST00000384153 107 ntBASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 RNA5SP475-201ENST00000410568 110 ntBASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 AC010655.3-201ENST00000478818 450 ntBASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 Y_RNA.713-201ENST00000517013 96 ntBASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 AC131281.1-201ENST00000522984 164 ntBASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 RAC1P9-201ENST00000604990 392 ntBASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 Y_RNA.772-201ENST00000606692 102 ntBASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 MIR3674-201ENST00000636576 68 ntBASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 AL159152.1-201ENST00000635019 2587 ntBASIC1.95□□□□□ -2.1
KRTCAP3Q53RY4 MIR410-201ENST00000362222 80 ntBASIC1.94□□□□□ -2.1
KRTCAP3Q53RY4 Y_RNA.210-201ENST00000364161 110 ntBASIC1.94□□□□□ -2.1
KRTCAP3Q53RY4 Y_RNA.214-201ENST00000364201 112 ntBASIC1.94□□□□□ -2.1
KRTCAP3Q53RY4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.94□□□□□ -2.1
KRTCAP3Q53RY4 AC008134.1-201ENST00000420943 193 ntBASIC1.94□□□□□ -2.1
KRTCAP3Q53RY4 AL358176.2-201ENST00000425769 204 ntBASIC1.94□□□□□ -2.1
KRTCAP3Q53RY4 AL445646.1-201ENST00000431784 216 ntBASIC1.94□□□□□ -2.1
KRTCAP3Q53RY4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.94□□□□□ -2.1
KRTCAP3Q53RY4 RNU6-397P-201ENST00000516226 104 ntBASIC1.94□□□□□ -2.1
KRTCAP3Q53RY4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTCAP3Q53RY4 MIR3169-201ENST00000578032 83 ntBASIC1.94□□□□□ -2.1
KRTCAP3Q53RY4 AL355297.3-201ENST00000604082 446 ntBASIC1.94□□□□□ -2.1
KRTCAP3Q53RY4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTCAP3Q53RY4 AC245060.5-201ENST00000610778 3293 ntBASIC1.93□□□□□ -2.1
KRTCAP3Q53RY4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTCAP3Q53RY4 Y_RNA.439-201ENST00000384119 94 ntBASIC1.93□□□□□ -2.1
KRTCAP3Q53RY4 SNORA67.3-201ENST00000384366 140 ntBASIC1.93□□□□□ -2.1
KRTCAP3Q53RY4 RNU6-1105P-201ENST00000384774 107 ntBASIC1.93□□□□□ -2.1
KRTCAP3Q53RY4 AC019129.1-201ENST00000403786 261 ntBASIC1.93□□□□□ -2.1
KRTCAP3Q53RY4 MIR548F4-201ENST00000408515 105 ntBASIC1.93□□□□□ -2.1
KRTCAP3Q53RY4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTCAP3Q53RY4 AC009310.1-201ENST00000414414 451 ntBASIC1.93□□□□□ -2.1
KRTCAP3Q53RY4 ELOCP20-201ENST00000422460 345 ntBASIC1.93□□□□□ -2.1
KRTCAP3Q53RY4 AC073910.1-201ENST00000445047 438 ntBASIC1.93□□□□□ -2.1
KRTCAP3Q53RY4 RNU6-897P-201ENST00000517135 105 ntBASIC1.93□□□□□ -2.1
KRTCAP3Q53RY4 AC025647.1-201ENST00000517879 253 ntBASIC1.93□□□□□ -2.1
KRTCAP3Q53RY4 AL117187.1-201ENST00000555482 181 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 464.4 ms