Protein–RNA interactions for Protein: Q9C098

DCLK3, Serine/threonine-protein kinase DCLK3, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3Q9C098 RNU6-290P-201ENST00000365212 101 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 MIR218-1-201ENST00000384999 110 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 MIR221-201ENST00000385135 110 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
DCLK3Q9C098 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.32□□□□□ -2.04
DCLK3Q9C098 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.32□□□□□ -2.04
DCLK3Q9C098 RAB28P5-201ENST00000427490 651 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 AC004386.2-201ENST00000441858 148 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 RNU6-1023P-201ENST00000516137 106 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 RNA5SP200-201ENST00000516360 103 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 RNU7-110P-201ENST00000516891 62 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 AC018448.1-201ENST00000552843 316 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 AC026470.2-201ENST00000561492 181 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.32□□□□□ -2.04
DCLK3Q9C098 MIR5006-201ENST00000583027 110 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 AL713866.2-201ENST00000603579 219 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 AL670379.2-201ENST00000604983 252 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 TCL6_2.1-201ENST00000615162 119 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 MIR7157-201ENST00000635801 60 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.32□□□□□ -2.04
DCLK3Q9C098 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
DCLK3Q9C098 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
DCLK3Q9C098 MIR335-201ENST00000362173 94 ntBASIC2.31□□□□□ -2.04
DCLK3Q9C098 RNU1-62P-201ENST00000362599 164 ntBASIC2.31□□□□□ -2.04
DCLK3Q9C098 SNORD27-201ENST00000363981 72 ntBASIC2.31□□□□□ -2.04
DCLK3Q9C098 RNU6-944P-201ENST00000364023 107 ntBASIC2.31□□□□□ -2.04
DCLK3Q9C098 SNORD32B-201ENST00000364460 84 ntBASIC2.31□□□□□ -2.04
DCLK3Q9C098 RNU6-1026P-201ENST00000384465 108 ntBASIC2.31□□□□□ -2.04
DCLK3Q9C098 RNU6-1274P-201ENST00000384557 107 ntBASIC2.31□□□□□ -2.04
DCLK3Q9C098 RNA5SP504-201ENST00000410676 117 ntBASIC2.31□□□□□ -2.04
DCLK3Q9C098 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.31□□□□□ -2.04
DCLK3Q9C098 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.31□□□□□ -2.04
DCLK3Q9C098 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.31□□□□□ -2.04
DCLK3Q9C098 AC005176.2-201ENST00000596933 147 ntBASIC2.31□□□□□ -2.04
DCLK3Q9C098 AC011373.1-201ENST00000607270 237 ntBASIC2.31□□□□□ -2.04
DCLK3Q9C098 MIR6840-201ENST00000611937 71 ntBASIC2.31□□□□□ -2.04
DCLK3Q9C098 AC009831.4-201ENST00000620744 325 ntBASIC2.31□□□□□ -2.04
DCLK3Q9C098 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
DCLK3Q9C098 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
DCLK3Q9C098 AC092881.1-201ENST00000638218 2733 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 RNU4-90P-201ENST00000362773 141 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 Y_RNA.101-201ENST00000363154 102 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 RNU5F-3P-201ENST00000363767 117 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 Y_RNA.257-201ENST00000364596 102 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 MIR504-201ENST00000385065 83 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 RNU6-220P-201ENST00000390919 107 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 AL603910.2-201ENST00000407268 136 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 MIR320B2-201ENST00000408479 138 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 Y_RNA.597-201ENST00000410463 100 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 RNU5A-5P-201ENST00000411054 116 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.3□□□□□ -2.04
DCLK3Q9C098 AC080013.2-201ENST00000460866 323 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 RPS29P21-201ENST00000496272 170 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 HMGB3P17-201ENST00000504195 649 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 AC074133.1-201ENST00000515696 183 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 MIR449C-201ENST00000516047 92 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 RNU2-44P-201ENST00000516795 194 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 RNU1-117P-201ENST00000517041 158 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.3□□□□□ -2.04
DCLK3Q9C098 MIR3199-1-201ENST00000582434 88 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 SNORD113-5-201ENST00000607261 78 ntBASIC2.3□□□□□ -2.04
DCLK3Q9C098 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
DCLK3Q9C098 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
DCLK3Q9C098 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
DCLK3Q9C098 Y_RNA.230-201ENST00000364348 109 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 SNORA20.1-201ENST00000364790 130 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 Y_RNA.416-201ENST00000384014 113 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 Y_RNA.446-201ENST00000384178 104 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 Y_RNA.498-201ENST00000384460 102 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 Y_RNA.539-201ENST00000384635 107 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 RNU6-21P-201ENST00000384710 107 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 SNORA48.3-201ENST00000391081 134 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.29□□□□□ -2.04
DCLK3Q9C098 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.29□□□□□ -2.04
DCLK3Q9C098 AC009237.7-201ENST00000447357 229 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 AC090515.1-201ENST00000465295 476 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 RPS23P5-201ENST00000495419 428 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 SEPT14P8-201ENST00000508026 178 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.29□□□□□ -2.04
DCLK3Q9C098 RNU6-111P-201ENST00000517179 105 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 MIR5002-201ENST00000584713 97 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 AL109918.3-201ENST00000603072 338 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 AC091932.3-201ENST00000624223 323 ntBASIC2.29□□□□□ -2.04
DCLK3Q9C098 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.29□□□□□ -2.04
DCLK3Q9C098 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.29□□□□□ -2.04
DCLK3Q9C098 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
DCLK3Q9C098 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
DCLK3Q9C098 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.28□□□□□ -2.04
DCLK3Q9C098 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
DCLK3Q9C098 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
DCLK3Q9C098 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
DCLK3Q9C098 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.28□□□□□ -2.04
DCLK3Q9C098 Y_RNA.20-201ENST00000362479 113 ntBASIC2.28□□□□□ -2.04
DCLK3Q9C098 Y_RNA.54-201ENST00000362766 105 ntBASIC2.28□□□□□ -2.04
DCLK3Q9C098 SNORA67.2-201ENST00000384300 149 ntBASIC2.28□□□□□ -2.04
DCLK3Q9C098 MT-TR-201ENST00000387439 65 ntBASIC2.28□□□□□ -2.04
DCLK3Q9C098 MIR548H3-201ENST00000408771 118 ntBASIC2.28□□□□□ -2.04
DCLK3Q9C098 SNORA11.4-201ENST00000408823 129 ntBASIC2.28□□□□□ -2.04
DCLK3Q9C098 RNU6-847P-201ENST00000411115 108 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 268.7 ms