Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SNORA50A-202ENST00000629536 136 ntBASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 AC068647.1-201ENST00000489539 2265 ntBASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 AC018555.1-201ENST00000567548 1980 ntBASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 MIR181A2-201ENST00000384863 110 ntBASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 RNU6-381P-201ENST00000391259 108 ntBASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 RN7SKP51-201ENST00000410781 304 ntBASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 SRIP3-201ENST00000413200 219 ntBASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 MTCO1P44-201ENST00000441935 243 ntBASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 RNU7-115P-201ENST00000516433 55 ntBASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 SNORA70.19-201ENST00000516717 90 ntBASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 RNU6-667P-201ENST00000517186 102 ntBASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 MIR4744-201ENST00000581563 82 ntBASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 uc_338.1-201ENST00000612113 180 ntBASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 MTND1P7-201ENST00000632801 297 ntBASIC3.69□□□□□ -1.82
TMEM88BA6NKF7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 Y_RNA.441-201ENST00000384123 112 ntBASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 EBAG9P1-201ENST00000418955 543 ntBASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 AL445687.1-201ENST00000439946 251 ntBASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 AC009238.1-201ENST00000442165 424 ntBASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 AC009237.6-201ENST00000446969 424 ntBASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 AC117454.1-201ENST00000491120 168 ntBASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 RNU6-856P-201ENST00000516959 98 ntBASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 AC107934.2-201ENST00000518653 310 ntBASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 PRELID2P1-201ENST00000552837 301 ntBASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 POLR3GP1-201ENST00000594073 261 ntBASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 AP003357.1-201ENST00000604497 148 ntBASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM88BA6NKF7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 SNORA36B-201ENST00000410438 131 ntBASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 RNU6-1135P-201ENST00000411083 103 ntBASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 RPL23AP67-201ENST00000465341 474 ntBASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 AC008413.1-201ENST00000511864 177 ntBASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 RNU6-255P-201ENST00000516957 105 ntBASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 MIR3144-201ENST00000579460 79 ntBASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 AC004832.4-201ENST00000608952 331 ntBASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 AL391903.3-201ENST00000612158 163 ntBASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 AC093010.3-201ENST00000570269 15214 ntBASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.67□□□□□ -1.82
TMEM88BA6NKF7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TMEM88BA6NKF7 AL356292.1-201ENST00000283110 373 ntBASIC3.66□□□□□ -1.82
TMEM88BA6NKF7 MIR22-201ENST00000362190 85 ntBASIC3.66□□□□□ -1.82
TMEM88BA6NKF7 Y_RNA.24-201ENST00000362508 103 ntBASIC3.66□□□□□ -1.82
TMEM88BA6NKF7 RNU6-275P-201ENST00000364910 107 ntBASIC3.66□□□□□ -1.82
TMEM88BA6NKF7 RNY1P5-201ENST00000383890 115 ntBASIC3.66□□□□□ -1.82
TMEM88BA6NKF7 AL135786.1-201ENST00000415892 214 ntBASIC3.66□□□□□ -1.82
TMEM88BA6NKF7 AC245102.2-201ENST00000448956 180 ntBASIC3.66□□□□□ -1.82
TMEM88BA6NKF7 AC025445.1-201ENST00000502728 300 ntBASIC3.66□□□□□ -1.82
TMEM88BA6NKF7 MIR3133-201ENST00000583157 78 ntBASIC3.66□□□□□ -1.82
TMEM88BA6NKF7 MIR4438-201ENST00000585271 93 ntBASIC3.66□□□□□ -1.82
TMEM88BA6NKF7 uc_338.25-201ENST00000613756 156 ntBASIC3.66□□□□□ -1.82
TMEM88BA6NKF7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
TMEM88BA6NKF7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
TMEM88BA6NKF7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TMEM88BA6NKF7 AC009487.2-201ENST00000420969 6821 ntBASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 RNU6-774P-201ENST00000363238 107 ntBASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 RNA5SP125-201ENST00000364843 120 ntBASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 U8.7-201ENST00000364940 136 ntBASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 SNORA25B-201ENST00000365507 128 ntBASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 RNU6-969P-201ENST00000383900 105 ntBASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 MIR196B-201ENST00000384852 84 ntBASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 MIR616-201ENST00000385293 97 ntBASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 RNU6-394P-201ENST00000410735 107 ntBASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 NDUFA5P6-201ENST00000542110 379 ntBASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 AC127455.1-201ENST00000565496 145 ntBASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM88BA6NKF7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TMEM88BA6NKF7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms