Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SNORA53-201ENST00000391141 249 ntBASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-121P-201ENST00000410525 99 ntBASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-57P-201ENST00000411348 103 ntBASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 TRBVB-201ENST00000477100 408 ntBASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 AC107222.1-201ENST00000510899 637 ntBASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-1146P-201ENST00000516282 102 ntBASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR3149-201ENST00000584629 83 ntBASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 AC090115.4-201ENST00000609970 188 ntBASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 SNORA25.6-201ENST00000364121 118 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.222-201ENST00000364264 102 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.288-201ENST00000364854 92 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-702P-201ENST00000364982 107 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.461-201ENST00000384263 103 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU1-148P-201ENST00000384472 162 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR568-201ENST00000385036 95 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-1248P-201ENST00000391096 64 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU2-20P-201ENST00000410425 191 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.602-201ENST00000410535 92 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 RNA5SP21-201ENST00000410917 96 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 AC010531.2-201ENST00000465012 153 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 SNORA70.12-201ENST00000516084 153 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-496P-201ENST00000516145 99 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU2-12P-201ENST00000517216 168 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR4503-201ENST00000582187 83 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR4435-1-201ENST00000582552 80 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 AC010297.1-201ENST00000623948 149 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 AC006435.5-201ENST00000624486 112 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 IGHVIII-44-202ENST00000636235 289 ntBASIC2.68□□□□□ -1.98
PCDHGA3Q9Y5H0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-859P-201ENST00000362728 107 ntBASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.105-201ENST00000363182 111 ntBASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.243-201ENST00000364481 109 ntBASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-806P-201ENST00000365147 105 ntBASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-1240P-201ENST00000365155 104 ntBASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.376-201ENST00000365638 108 ntBASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR196B-201ENST00000384852 84 ntBASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 AL138827.1-201ENST00000402666 306 ntBASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 AC010154.1-201ENST00000425857 269 ntBASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-155P-201ENST00000516347 100 ntBASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-856P-201ENST00000516959 98 ntBASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDHGA3Q9Y5H0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU1-35P-201ENST00000362782 153 ntBASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.84-201ENST00000363011 104 ntBASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.101-201ENST00000363154 102 ntBASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-271P-201ENST00000363858 105 ntBASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-290P-201ENST00000365212 101 ntBASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.401-201ENST00000383965 117 ntBASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR181A2-201ENST00000384863 110 ntBASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 AC139712.2-201ENST00000424302 339 ntBASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 AC016717.1-201ENST00000448918 286 ntBASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 AC010598.1-201ENST00000510378 103 ntBASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 AC025647.1-201ENST00000517879 253 ntBASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR4658-201ENST00000584344 65 ntBASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PCDHGA3Q9Y5H0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.65□□□□□ -1.98
PCDHGA3Q9Y5H0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.65□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR335-201ENST00000362173 94 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU6-454P-201ENST00000364292 107 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU6-326P-201ENST00000365480 107 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU6-710P-201ENST00000410424 105 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU2-52P-201ENST00000410680 190 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 RNU6-1203P-201ENST00000410703 110 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 RPL21P38-201ENST00000418090 167 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 POLR2KP2-201ENST00000438155 177 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 AP002001.1-203ENST00000534002 267 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 AC055872.1-201ENST00000570978 278 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 AC127459.3-201ENST00000624328 466 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 U6.115-201ENST00000636045 103 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 AL159152.1-201ENST00000635019 2587 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
PCDHGA3Q9Y5H0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 Y_RNA.26-201ENST00000362539 101 ntBASIC2.64□□□□□ -1.99
PCDHGA3Q9Y5H0 snoU2_19.2-201ENST00000363024 80 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms