Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF216Q9NWF9 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF216Q9NWF9 RNA5SP387-201ENST00000364226 106 ntBASIC5.75□□□□□ -1.49
RNF216Q9NWF9 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF216Q9NWF9 RNU7-85P-201ENST00000458851 63 ntBASIC5.75□□□□□ -1.49
RNF216Q9NWF9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF216Q9NWF9 RN7SL636P-201ENST00000497504 294 ntBASIC5.75□□□□□ -1.49
RNF216Q9NWF9 RNU7-137P-201ENST00000516788 62 ntBASIC5.75□□□□□ -1.49
RNF216Q9NWF9 RNU6-303P-201ENST00000517091 106 ntBASIC5.75□□□□□ -1.49
RNF216Q9NWF9 NEAT1_2.1-201ENST00000620525 105 ntBASIC5.75□□□□□ -1.49
RNF216Q9NWF9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
RNF216Q9NWF9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF216Q9NWF9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
RNF216Q9NWF9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF216Q9NWF9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF216Q9NWF9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF216Q9NWF9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF216Q9NWF9 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RNF216Q9NWF9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RNF216Q9NWF9 MIR141-201ENST00000384975 95 ntBASIC5.74□□□□□ -1.49
RNF216Q9NWF9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RNF216Q9NWF9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RNF216Q9NWF9 AC244636.1-201ENST00000421152 228 ntBASIC5.74□□□□□ -1.49
RNF216Q9NWF9 AC009220.1-201ENST00000451614 275 ntBASIC5.74□□□□□ -1.49
RNF216Q9NWF9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF216Q9NWF9 RNA5SP373-201ENST00000517271 95 ntBASIC5.74□□□□□ -1.49
RNF216Q9NWF9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC5.74□□□□□ -1.49
RNF216Q9NWF9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC5.74□□□□□ -1.49
RNF216Q9NWF9 MIR5739-201ENST00000619803 80 ntBASIC5.74□□□□□ -1.49
RNF216Q9NWF9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC5.74□□□□□ -1.49
RNF216Q9NWF9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF216Q9NWF9 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RNF216Q9NWF9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF216Q9NWF9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF216Q9NWF9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF216Q9NWF9 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF216Q9NWF9 AC008079.2-201ENST00000623543 20396 ntBASIC5.73□□□□□ -1.49
RNF216Q9NWF9 RNA5SP322-201ENST00000363617 119 ntBASIC5.73□□□□□ -1.49
RNF216Q9NWF9 SNORA24-201ENST00000384096 131 ntBASIC5.73□□□□□ -1.49
RNF216Q9NWF9 SCARNA17.1-201ENST00000516211 143 ntBASIC5.73□□□□□ -1.49
RNF216Q9NWF9 SCARNA17.2-201ENST00000516334 143 ntBASIC5.73□□□□□ -1.49
RNF216Q9NWF9 SCARNA20.4-201ENST00000516969 131 ntBASIC5.73□□□□□ -1.49
RNF216Q9NWF9 SNORA28-201ENST00000606769 126 ntBASIC5.73□□□□□ -1.49
RNF216Q9NWF9 SCARNA17.4-201ENST00000614296 143 ntBASIC5.73□□□□□ -1.49
RNF216Q9NWF9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RNF216Q9NWF9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF216Q9NWF9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF216Q9NWF9 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
RNF216Q9NWF9 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF216Q9NWF9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF216Q9NWF9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RNF216Q9NWF9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF216Q9NWF9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF216Q9NWF9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF216Q9NWF9 RNU1-23P-201ENST00000363361 144 ntBASIC5.72□□□□□ -1.49
RNF216Q9NWF9 RNU6-811P-201ENST00000384069 107 ntBASIC5.72□□□□□ -1.49
RNF216Q9NWF9 AC016397.1-201ENST00000412463 242 ntBASIC5.72□□□□□ -1.49
RNF216Q9NWF9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RNF216Q9NWF9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF216Q9NWF9 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF216Q9NWF9 MIRLET7C-201ENST00000362160 84 ntBASIC5.71□□□□□ -1.5
RNF216Q9NWF9 RNU1-94P-201ENST00000362627 173 ntBASIC5.71□□□□□ -1.5
RNF216Q9NWF9 SNORD115-31-201ENST00000365318 82 ntBASIC5.71□□□□□ -1.5
RNF216Q9NWF9 MIR1182-201ENST00000408363 97 ntBASIC5.71□□□□□ -1.5
RNF216Q9NWF9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF216Q9NWF9 AL606517.2-201ENST00000442855 241 ntBASIC5.71□□□□□ -1.5
RNF216Q9NWF9 BX284632.1-201ENST00000478218 541 ntBASIC5.71□□□□□ -1.5
RNF216Q9NWF9 RN7SL244P-201ENST00000493405 297 ntBASIC5.71□□□□□ -1.5
RNF216Q9NWF9 MIR4330-201ENST00000579077 105 ntBASIC5.71□□□□□ -1.5
RNF216Q9NWF9 MIR4697-201ENST00000582977 78 ntBASIC5.71□□□□□ -1.5
RNF216Q9NWF9 FAM25E-202ENST00000608562 189 ntBASIC5.71□□□□□ -1.5
RNF216Q9NWF9 AC243994.1-201ENST00000618627 109 ntBASIC5.71□□□□□ -1.5
RNF216Q9NWF9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF216Q9NWF9 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF216Q9NWF9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
RNF216Q9NWF9 AC104623.2-202ENST00000623477 4002 ntBASIC5.71□□□□□ -1.5
RNF216Q9NWF9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF216Q9NWF9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
RNF216Q9NWF9 HMGN1P33-201ENST00000432945 451 ntBASIC5.7□□□□□ -1.5
RNF216Q9NWF9 AC040958.1-201ENST00000561102 201 ntBASIC5.7□□□□□ -1.5
RNF216Q9NWF9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RNF216Q9NWF9 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RNF216Q9NWF9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF216Q9NWF9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF216Q9NWF9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
RNF216Q9NWF9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF216Q9NWF9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF216Q9NWF9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RNF216Q9NWF9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
RNF216Q9NWF9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RNF216Q9NWF9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF216Q9NWF9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF216Q9NWF9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RNF216Q9NWF9 AC244107.2-201ENST00000611773 76 ntBASIC5.69□□□□□ -1.5
RNF216Q9NWF9 AC091953.3-201ENST00000623220 236 ntBASIC5.69□□□□□ -1.5
RNF216Q9NWF9 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF216Q9NWF9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RNF216Q9NWF9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF216Q9NWF9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF216Q9NWF9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms