Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RNU6-1156P-201ENST00000410365 100 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 AC243428.1-201ENST00000421099 264 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 UBE2V1P8-201ENST00000437166 265 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 SNRPEP8-201ENST00000442866 260 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 RPS29P25-201ENST00000481709 171 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 TRBVA-201ENST00000498804 316 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 AC011406.1-201ENST00000512440 370 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 SNORA40.12-201ENST00000516329 111 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 UBL5P4-201ENST00000562584 236 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.03□□□□□ -2.24
SCN4AP35499 AP000907.4-201ENST00000604143 237 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 MIR3976-201ENST00000606807 139 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 AL353149.1-201ENST00000610667 244 ntBASIC1.03□□□□□ -2.24
SCN4AP35499 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.03□□□□□ -2.24
SCN4AP35499 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
SCN4AP35499 RNU6-1013P-201ENST00000384180 107 ntBASIC1.03□□□□□ -2.25
SCN4AP35499 RNU6-975P-201ENST00000384296 105 ntBASIC1.03□□□□□ -2.25
SCN4AP35499 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.03□□□□□ -2.25
SCN4AP35499 RNA5SP57-201ENST00000459463 123 ntBASIC1.03□□□□□ -2.25
SCN4AP35499 AC114982.1-201ENST00000469402 321 ntBASIC1.03□□□□□ -2.25
SCN4AP35499 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.03□□□□□ -2.25
SCN4AP35499 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.03□□□□□ -2.25
SCN4AP35499 AC074133.1-201ENST00000515696 183 ntBASIC1.03□□□□□ -2.25
SCN4AP35499 RNU6-948P-201ENST00000516374 107 ntBASIC1.03□□□□□ -2.25
SCN4AP35499 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.03□□□□□ -2.25
SCN4AP35499 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.03□□□□□ -2.25
SCN4AP35499 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.03□□□□□ -2.25
SCN4AP35499 AL590240.4-201ENST00000616908 390 ntBASIC1.03□□□□□ -2.25
SCN4AP35499 AL589743.1-201ENST00000551932 2712 ntBASIC1.03□□□□□ -2.25
SCN4AP35499 Y_RNA.433-201ENST00000384089 102 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 Y_RNA.530-201ENST00000384587 101 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 RNA5SP494-201ENST00000410653 129 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 RPL30P13-201ENST00000418873 348 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 AC016907.1-201ENST00000419483 435 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 EIF4EP2-201ENST00000422816 654 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.02□□□□□ -2.25
SCN4AP35499 C8orf59P1-201ENST00000429930 303 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 JTBP1-201ENST00000441314 247 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 MTCO1P44-201ENST00000441935 243 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 RNU7-57P-201ENST00000459540 60 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 AC103810.8-201ENST00000607347 118 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 AC022513.1-201ENST00000624512 117 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 MIR338-201ENST00000636369 67 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.02□□□□□ -2.25
SCN4AP35499 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SCN4AP35499 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
SCN4AP35499 RNU4-40P-201ENST00000364351 143 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 SNORD26-201ENST00000384147 75 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 SNORA36A-201ENST00000384221 132 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 MIR32-201ENST00000384965 70 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 AC004866.1-201ENST00000411748 78 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 RPS26P42-201ENST00000413485 326 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 AC099677.2-201ENST00000436385 175 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 AC069257.2-201ENST00000441819 155 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 MTCO3P8-201ENST00000453691 755 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.01□□□□□ -2.25
SCN4AP35499 snoU13.27-201ENST00000459278 104 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 ACA59.1-201ENST00000515966 143 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 SUMO2P18-201ENST00000518873 252 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 AC109635.3-201ENST00000529536 185 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 AL590705.4-201ENST00000532209 134 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 AF250324.2-201ENST00000608299 610 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 MIR8087-201ENST00000612745 78 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.01□□□□□ -2.25
SCN4AP35499 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SCN4AP35499 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.01□□□□□ -2.25
SCN4AP35499 snoU2-30.2-201ENST00000362805 70 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 Y_RNA.123-201ENST00000363338 102 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 RNU6-1240P-201ENST00000365155 104 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 Y_RNA.533-201ENST00000384596 114 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 MIR549A-201ENST00000385268 96 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SCN4AP35499 MIR208B-201ENST00000401172 77 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 RNA5SP118-201ENST00000410385 109 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 RPS27P16-201ENST00000425758 201 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 AC009237.7-201ENST00000447357 229 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 RNU6-221P-201ENST00000459541 99 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 AC087477.1-201ENST00000465747 340 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 AC097473.1-201ENST00000508142 408 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 Y_RNA.704-201ENST00000516851 102 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 AC016925.2-201ENST00000605108 242 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.01□□□□□ -2.25
SCN4AP35499 SCARNA4-201ENST00000629045 128 ntBASIC1.01□□□□□ -2.25
SCN4AP35499 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1□□□□□ -2.25
SCN4AP35499 RNU6-451P-201ENST00000362921 107 ntBASIC1□□□□□ -2.25
SCN4AP35499 Y_RNA.85-201ENST00000363014 111 ntBASIC1□□□□□ -2.25
SCN4AP35499 Y_RNA.414-201ENST00000384011 101 ntBASIC1□□□□□ -2.25
SCN4AP35499 SNORD116-4-201ENST00000384733 96 ntBASIC1□□□□□ -2.25
SCN4AP35499 MIR586-201ENST00000385035 97 ntBASIC1□□□□□ -2.25
SCN4AP35499 RNU6-908P-201ENST00000410160 94 ntBASIC1□□□□□ -2.25
SCN4AP35499 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1□□□□□ -2.25
SCN4AP35499 PCNPP5-201ENST00000452246 481 ntBASIC1□□□□□ -2.25
SCN4AP35499 AC079354.2-201ENST00000453523 154 ntBASIC1□□□□□ -2.25
SCN4AP35499 SNORD65B-201ENST00000459126 73 ntBASIC1□□□□□ -2.25
SCN4AP35499 AC005908.1-201ENST00000468701 347 ntBASIC1□□□□□ -2.25
SCN4AP35499 AC008834.1-201ENST00000511612 175 ntBASIC1□□□□□ -2.25
SCN4AP35499 TPRKBP2-201ENST00000565969 475 ntBASIC1□□□□□ -2.25
SCN4AP35499 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 215 ms