Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 RNU6-53P-201ENST00000365367 106 ntBASIC0.81□□□□□ -2.28
TRBV9A0A0B4J1U6 RNU6-793P-201ENST00000384233 104 ntBASIC0.81□□□□□ -2.28
TRBV9A0A0B4J1U6 DAP3P1-201ENST00000441522 278 ntBASIC0.81□□□□□ -2.28
TRBV9A0A0B4J1U6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.81□□□□□ -2.28
TRBV9A0A0B4J1U6 ACA59.1-201ENST00000515966 143 ntBASIC0.81□□□□□ -2.28
TRBV9A0A0B4J1U6 RNU6-322P-201ENST00000516010 103 ntBASIC0.81□□□□□ -2.28
TRBV9A0A0B4J1U6 7SK.7-201ENST00000603504 247 ntBASIC0.81□□□□□ -2.28
TRBV9A0A0B4J1U6 SNORD114-21-201ENST00000606412 72 ntBASIC0.81□□□□□ -2.28
TRBV9A0A0B4J1U6 RNU6-89P-201ENST00000606519 100 ntBASIC0.81□□□□□ -2.28
TRBV9A0A0B4J1U6 AL158209.2-201ENST00000619266 216 ntBASIC0.81□□□□□ -2.28
TRBV9A0A0B4J1U6 AC099654.12-201ENST00000639868 649 ntBASIC0.81□□□□□ -2.28
TRBV9A0A0B4J1U6 RNU6-137P-201ENST00000363680 108 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 SNORA12.1-201ENST00000390873 148 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 SNORD12-201ENST00000391002 90 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 RNU11-5P-201ENST00000391216 129 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 AL451046.2-201ENST00000403074 277 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 RPL30P16-201ENST00000419341 429 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 NDUFA5P4-201ENST00000436704 385 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 AC245047.7-201ENST00000440265 293 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 RPL39P39-201ENST00000455840 151 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 TPT1P7-201ENST00000458300 517 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 RPS27P22-201ENST00000478056 241 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 AC027419.1-201ENST00000522976 328 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 AC027288.2-201ENST00000553028 243 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 FRG2DP-202ENST00000566967 323 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 AC010620.1-201ENST00000601088 1102 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 AC068790.6-201ENST00000602558 258 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 MIR3974-201ENST00000637126 96 ntBASIC0.8□□□□□ -2.28
TRBV9A0A0B4J1U6 RNA5SP432-201ENST00000362480 116 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 RNU6-254P-201ENST00000363377 107 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 Y_RNA.184-201ENST00000363884 108 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 Y_RNA.265-201ENST00000364677 108 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 SNORD114-24-201ENST00000365029 72 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 RNU6-1054P-201ENST00000411293 104 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 SEPT14P3-201ENST00000439401 183 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 AL732372.2-207ENST00000445840 183 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 MRPS10P1-201ENST00000448483 130 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 SEPT14P2-201ENST00000453405 183 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 AC091179.3-201ENST00000474761 144 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 SEPT14P4-201ENST00000513445 186 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 AC108729.3-201ENST00000513484 108 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 FO082796.1-201ENST00000523795 183 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 ZNF519P2-201ENST00000557032 169 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 MIR3611-201ENST00000584484 83 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 AL357312.1-201ENST00000603879 298 ntBASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRBV9A0A0B4J1U6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 Y_RNA.179-201ENST00000363844 90 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 RNU4-38P-201ENST00000364472 129 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 Y_RNA.373-201ENST00000365600 103 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 MTCO3P40-201ENST00000392516 676 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 RNU6-321P-201ENST00000410912 106 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 RNU6-1068P-201ENST00000410958 103 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 TRBVA-201ENST00000498804 316 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 RNA5SP168-201ENST00000516642 112 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 RN7SKP49-201ENST00000516675 260 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 AC023157.2-201ENST00000540596 141 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 AK6P2-201ENST00000549020 471 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 AC090049.2-201ENST00000550377 109 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 AC080078.3-201ENST00000605407 463 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 AL020996.3-201ENST00000606617 222 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 AC006435.5-201ENST00000624486 112 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 AC068137.4-201ENST00000638485 296 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 AC068137.3-201ENST00000639191 341 ntBASIC0.78□□□□□ -2.28
TRBV9A0A0B4J1U6 RNU6-1252P-201ENST00000363054 104 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 RNU6-1187P-201ENST00000364771 110 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 RNU6-95P-201ENST00000384697 107 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 MIR517A-201ENST00000385001 87 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 SNORD41-201ENST00000386967 70 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 RNU6-159P-201ENST00000391080 106 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 DEFB108C-201ENST00000400154 252 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 AL355796.1-201ENST00000406706 323 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 MTND4P18-201ENST00000447010 465 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 SNORD124-201ENST00000459577 104 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 AC010469.2-201ENST00000496412 480 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 AC005840.1-201ENST00000498412 377 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 TRMT112P2-201ENST00000512910 132 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 RNU6-107P-201ENST00000516643 102 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 RNU2-56P-201ENST00000516826 190 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 AL512360.1-201ENST00000555346 234 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 UBL5P4-201ENST00000562584 236 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 PIGPP4-201ENST00000584447 307 ntBASIC0.77□□□□□ -2.29
TRBV9A0A0B4J1U6 AC016727.1-205ENST00000605437 569 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms