Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 USP9YP30-201ENST00000430729 455 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 ATP5J2P3-201ENST00000451550 258 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 SNORD5.1-201ENST00000458800 75 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 snoU13.30-201ENST00000458951 104 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 MTND5P5-201ENST00000503764 376 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-358P-201ENST00000516564 75 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-344P-201ENST00000516635 111 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 RNA5SP54-201ENST00000516951 92 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 SNORA31.17-201ENST00000516953 127 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-58P-201ENST00000517143 103 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 SUMO2P18-201ENST00000518873 252 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 AL161670.1-201ENST00000554348 137 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 AL160236.1-201ENST00000556317 195 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR3198-2-201ENST00000577868 80 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR5094-201ENST00000578766 85 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR4753-201ENST00000585119 83 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 AC084782.3-201ENST00000612282 578 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 AC083806.3-201ENST00000614016 455 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 AC093913.1-201ENST00000614178 329 ntBASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-137P-201ENST00000363680 108 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.355-201ENST00000365462 98 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-245P-201ENST00000384020 107 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-1235P-201ENST00000384559 107 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.533-201ENST00000384596 114 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR153-2-201ENST00000385225 87 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 SNORA40.6-201ENST00000391153 128 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-510P-201ENST00000391239 108 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 AL356776.1-201ENST00000406574 447 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 NCOR1P3-201ENST00000420479 303 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 AC245047.4-201ENST00000433189 144 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 AC016717.1-201ENST00000448918 286 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-498P-201ENST00000459468 107 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 RN7SKP179-201ENST00000516126 217 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 AC008269.2-201ENST00000561915 1105 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 AL353149.1-201ENST00000610667 244 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 AL157834.3-201ENST00000615543 103 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
CDC42EP4Q9H3Q1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-862P-201ENST00000362804 105 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-595P-201ENST00000363944 107 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-392P-201ENST00000364926 101 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.319-201ENST00000365138 92 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR518E-201ENST00000385252 88 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR548K-201ENST00000408406 116 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.599-201ENST00000410489 109 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 MTND3P8-201ENST00000412909 339 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 AC011406.1-201ENST00000512440 370 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-1041P-201ENST00000516254 102 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-948P-201ENST00000516374 107 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.682-201ENST00000516457 100 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 RNA5SP384-201ENST00000516615 116 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-1198P-201ENST00000516904 67 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU1-54P-201ENST00000517181 120 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 MTND4LP26-201ENST00000518144 282 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR4790-201ENST00000577799 79 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR4421-201ENST00000578133 69 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR6128-201ENST00000615528 109 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 AC068205.3-201ENST00000636385 468 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 ZNF299P-201ENST00000406845 1804 ntBASIC1.24□□□□□ -2.21
CDC42EP4Q9H3Q1 MTND4P12-201ENST00000498999 1377 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.116-201ENST00000363292 103 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.122-201ENST00000363331 96 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-1305P-201ENST00000364353 104 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.339-201ENST00000365325 102 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-439P-201ENST00000384188 106 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR320B2-201ENST00000408479 138 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR1285-1-201ENST00000408593 84 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.619-201ENST00000410951 90 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 AL139396.1-201ENST00000421137 167 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 AC114982.1-201ENST00000469402 321 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 AC026782.1-201ENST00000512952 449 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 AC016925.2-201ENST00000605108 242 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 AC018462.2-201ENST00000605375 395 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR338-201ENST00000636369 67 ntBASIC1.23□□□□□ -2.21
CDC42EP4Q9H3Q1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 241.4 ms