Protein–RNA interactions for Protein: Q16531

DDB1, DNA damage-binding protein 1, humanhuman

Predictions only

Length 1,140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1Q16531 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
DDB1Q16531 RNU1-72P-201ENST00000362976 153 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 RNU6-338P-201ENST00000383888 105 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 Y_RNA.439-201ENST00000384119 94 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 MIR218-1-201ENST00000384999 110 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 U6atac.2-201ENST00000408644 118 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 SUMO1P3-201ENST00000439961 304 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.16□□□□□ -1.9
DDB1Q16531 SUMO1P2-201ENST00000452524 304 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 AC026436.1-201ENST00000510537 270 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 RPPH1-2P-201ENST00000516688 293 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 SCARNA24.2-201ENST00000516968 130 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.16□□□□□ -1.9
DDB1Q16531 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.16□□□□□ -1.9
DDB1Q16531 Y_RNA.772-201ENST00000606692 102 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 AC010999.1-201ENST00000611856 324 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.16□□□□□ -1.9
DDB1Q16531 MIR376A1-201ENST00000616574 68 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DDB1Q16531 AC090517.3-201ENST00000625170 141 ntBASIC3.16□□□□□ -1.9
DDB1Q16531 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.16□□□□□ -1.9
DDB1Q16531 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDB1Q16531 AC016717.2-201ENST00000609089 5141 ntBASIC3.15□□□□□ -1.9
DDB1Q16531 AC080128.1-201ENST00000474389 1917 ntBASIC3.15□□□□□ -1.9
DDB1Q16531 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
DDB1Q16531 Y_RNA.54-201ENST00000362766 105 ntBASIC3.15□□□□□ -1.91
DDB1Q16531 RNU6-1145P-201ENST00000384246 107 ntBASIC3.15□□□□□ -1.91
DDB1Q16531 Y_RNA.541-201ENST00000384640 113 ntBASIC3.15□□□□□ -1.91
DDB1Q16531 RNA5SP210-201ENST00000391034 120 ntBASIC3.15□□□□□ -1.91
DDB1Q16531 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.15□□□□□ -1.91
DDB1Q16531 RNU6-138P-201ENST00000515952 107 ntBASIC3.15□□□□□ -1.91
DDB1Q16531 AC105245.1-201ENST00000581934 244 ntBASIC3.15□□□□□ -1.91
DDB1Q16531 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.15□□□□□ -1.91
DDB1Q16531 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.15□□□□□ -1.91
DDB1Q16531 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.14□□□□□ -1.91
DDB1Q16531 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.14□□□□□ -1.91
DDB1Q16531 SNORD115-46-201ENST00000390982 71 ntBASIC3.14□□□□□ -1.91
DDB1Q16531 SNORA12-201ENST00000391162 147 ntBASIC3.14□□□□□ -1.91
DDB1Q16531 MRPL35P1-201ENST00000404272 572 ntBASIC3.14□□□□□ -1.91
DDB1Q16531 AL603910.2-201ENST00000407268 136 ntBASIC3.14□□□□□ -1.91
DDB1Q16531 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
DDB1Q16531 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.14□□□□□ -1.91
DDB1Q16531 RN7SL499P-201ENST00000481141 276 ntBASIC3.14□□□□□ -1.91
DDB1Q16531 AL713866.2-201ENST00000603579 219 ntBASIC3.14□□□□□ -1.91
DDB1Q16531 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.14□□□□□ -1.91
DDB1Q16531 AC005562.2-201ENST00000618264 111 ntBASIC3.14□□□□□ -1.91
DDB1Q16531 AC141273.2-201ENST00000618989 130 ntBASIC3.14□□□□□ -1.91
DDB1Q16531 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
DDB1Q16531 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
DDB1Q16531 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DDB1Q16531 AL161431.1-201ENST00000618966 4205 ntBASIC3.14□□□□□ -1.91
DDB1Q16531 Y_RNA.65-201ENST00000362846 100 ntBASIC3.13□□□□□ -1.91
DDB1Q16531 Y_RNA.179-201ENST00000363844 90 ntBASIC3.13□□□□□ -1.91
DDB1Q16531 Y_RNA.277-201ENST00000364754 102 ntBASIC3.13□□□□□ -1.91
DDB1Q16531 Y_RNA.518-201ENST00000384552 113 ntBASIC3.13□□□□□ -1.91
DDB1Q16531 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DDB1Q16531 MIR548I3-201ENST00000408378 149 ntBASIC3.13□□□□□ -1.91
DDB1Q16531 MIR548I1-201ENST00000408810 149 ntBASIC3.13□□□□□ -1.91
DDB1Q16531 AC092427.1-202ENST00000430569 476 ntBASIC3.13□□□□□ -1.91
DDB1Q16531 Y_RNA.683-201ENST00000516508 93 ntBASIC3.13□□□□□ -1.91
DDB1Q16531 HSPE1P18-201ENST00000517602 280 ntBASIC3.13□□□□□ -1.91
DDB1Q16531 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.13□□□□□ -1.91
DDB1Q16531 MIR4643-201ENST00000577473 78 ntBASIC3.13□□□□□ -1.91
DDB1Q16531 AL365434.2-201ENST00000607979 234 ntBASIC3.13□□□□□ -1.91
DDB1Q16531 AC069294.1-201ENST00000608397 350 ntBASIC3.13□□□□□ -1.91
DDB1Q16531 AC135776.4-201ENST00000624300 1904 ntBASIC3.13□□□□□ -1.91
DDB1Q16531 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DDB1Q16531 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDB1Q16531 AL391987.6-201ENST00000305671 199 ntBASIC3.12□□□□□ -1.91
DDB1Q16531 RNU1-62P-201ENST00000362599 164 ntBASIC3.12□□□□□ -1.91
DDB1Q16531 Y_RNA.286-201ENST00000364813 102 ntBASIC3.12□□□□□ -1.91
DDB1Q16531 RNU6-209P-201ENST00000384118 107 ntBASIC3.12□□□□□ -1.91
DDB1Q16531 RNU6-793P-201ENST00000384233 104 ntBASIC3.12□□□□□ -1.91
DDB1Q16531 Y_RNA.595-201ENST00000410403 105 ntBASIC3.12□□□□□ -1.91
DDB1Q16531 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.12□□□□□ -1.91
DDB1Q16531 AC027124.2-201ENST00000428249 105 ntBASIC3.12□□□□□ -1.91
DDB1Q16531 AC007395.1-201ENST00000451333 677 ntBASIC3.12□□□□□ -1.91
DDB1Q16531 AC080013.2-201ENST00000460866 323 ntBASIC3.12□□□□□ -1.91
DDB1Q16531 AC091179.3-201ENST00000474761 144 ntBASIC3.12□□□□□ -1.91
DDB1Q16531 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.12□□□□□ -1.91
DDB1Q16531 AC023141.11-201ENST00000508864 202 ntBASIC3.12□□□□□ -1.91
DDB1Q16531 DEFB131C-201ENST00000528817 165 ntBASIC3.12□□□□□ -1.91
DDB1Q16531 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.12□□□□□ -1.91
DDB1Q16531 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.12□□□□□ -1.91
DDB1Q16531 MTND5P35-201ENST00000557537 1720 ntBASIC3.12□□□□□ -1.91
DDB1Q16531 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDB1Q16531 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
DDB1Q16531 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.11□□□□□ -1.91
DDB1Q16531 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDB1Q16531 SNORD113-8-201ENST00000363497 74 ntBASIC3.11□□□□□ -1.91
DDB1Q16531 SNORD32B-201ENST00000364460 84 ntBASIC3.11□□□□□ -1.91
DDB1Q16531 SNORA18.2-201ENST00000383865 132 ntBASIC3.11□□□□□ -1.91
DDB1Q16531 Y_RNA.416-201ENST00000384014 113 ntBASIC3.11□□□□□ -1.91
DDB1Q16531 Y_RNA.462-201ENST00000384268 102 ntBASIC3.11□□□□□ -1.91
DDB1Q16531 RNU4-30P-201ENST00000410245 143 ntBASIC3.11□□□□□ -1.91
DDB1Q16531 Y_RNA.597-201ENST00000410463 100 ntBASIC3.11□□□□□ -1.91
DDB1Q16531 RNU2-64P-201ENST00000411315 191 ntBASIC3.11□□□□□ -1.91
DDB1Q16531 AC004386.2-201ENST00000441858 148 ntBASIC3.11□□□□□ -1.91
DDB1Q16531 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.11□□□□□ -1.91
DDB1Q16531 RPL23AP42-201ENST00000471152 471 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 354.9 ms