Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 Z98742.3-201ENST00000418637 326 ntBASIC2.54□□□□□ -2
HOXD12P35452 AC004386.2-201ENST00000441858 148 ntBASIC2.54□□□□□ -2
HOXD12P35452 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.54□□□□□ -2
HOXD12P35452 snoU13.23-201ENST00000458863 104 ntBASIC2.54□□□□□ -2
HOXD12P35452 RNU2-44P-201ENST00000516795 194 ntBASIC2.54□□□□□ -2
HOXD12P35452 AC026470.2-201ENST00000561492 181 ntBASIC2.54□□□□□ -2
HOXD12P35452 AC026271.5-201ENST00000577873 130 ntBASIC2.54□□□□□ -2
HOXD12P35452 MIR4503-201ENST00000582187 83 ntBASIC2.54□□□□□ -2
HOXD12P35452 MIR4635-201ENST00000583759 79 ntBASIC2.54□□□□□ -2
HOXD12P35452 MZT1P2-201ENST00000604387 248 ntBASIC2.54□□□□□ -2
HOXD12P35452 AP000942.4-201ENST00000604811 241 ntBASIC2.54□□□□□ -2
HOXD12P35452 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.54□□□□□ -2
HOXD12P35452 AC010205.1-201ENST00000616668 449 ntBASIC2.54□□□□□ -2
HOXD12P35452 AC005562.2-201ENST00000618264 111 ntBASIC2.54□□□□□ -2
HOXD12P35452 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.54□□□□□ -2
HOXD12P35452 MTND5P35-201ENST00000557537 1720 ntBASIC2.54□□□□□ -2
HOXD12P35452 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HOXD12P35452 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.53□□□□□ -2
HOXD12P35452 Y_RNA.19-201ENST00000362462 99 ntBASIC2.53□□□□□ -2
HOXD12P35452 Y_RNA.64-201ENST00000362845 102 ntBASIC2.53□□□□□ -2
HOXD12P35452 Y_RNA.143-201ENST00000363520 106 ntBASIC2.53□□□□□ -2
HOXD12P35452 RNU6-727P-201ENST00000363592 107 ntBASIC2.53□□□□□ -2
HOXD12P35452 Y_RNA.183-201ENST00000363882 113 ntBASIC2.53□□□□□ -2
HOXD12P35452 Y_RNA.276-201ENST00000364732 109 ntBASIC2.53□□□□□ -2
HOXD12P35452 RNU6-806P-201ENST00000365147 105 ntBASIC2.53□□□□□ -2
HOXD12P35452 RNU6-793P-201ENST00000384233 104 ntBASIC2.53□□□□□ -2
HOXD12P35452 RNU6-1274P-201ENST00000384557 107 ntBASIC2.53□□□□□ -2
HOXD12P35452 MIR518C-201ENST00000384822 101 ntBASIC2.53□□□□□ -2
HOXD12P35452 AL079342.1-201ENST00000401460 267 ntBASIC2.53□□□□□ -2
HOXD12P35452 Y_RNA.595-201ENST00000410403 105 ntBASIC2.53□□□□□ -2
HOXD12P35452 AL731563.1-201ENST00000442202 214 ntBASIC2.53□□□□□ -2
HOXD12P35452 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.53□□□□□ -2
HOXD12P35452 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.53□□□□□ -2
HOXD12P35452 Y_RNA.683-201ENST00000516508 93 ntBASIC2.53□□□□□ -2
HOXD12P35452 RNU7-193P-201ENST00000516723 65 ntBASIC2.53□□□□□ -2
HOXD12P35452 RNA5SP137-201ENST00000516833 135 ntBASIC2.53□□□□□ -2
HOXD12P35452 Y_RNA.713-201ENST00000517013 96 ntBASIC2.53□□□□□ -2
HOXD12P35452 DEFB131C-201ENST00000528817 165 ntBASIC2.53□□□□□ -2
HOXD12P35452 MIR5006-201ENST00000583027 110 ntBASIC2.53□□□□□ -2
HOXD12P35452 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.53□□□□□ -2
HOXD12P35452 TCL6_2.1-201ENST00000615162 119 ntBASIC2.53□□□□□ -2
HOXD12P35452 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXD12P35452 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXD12P35452 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXD12P35452 Y_RNA.26-201ENST00000362539 101 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 RNU1-62P-201ENST00000362599 164 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 RNU6-944P-201ENST00000364023 107 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 Y_RNA.222-201ENST00000364264 102 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 SNORD32B-201ENST00000364460 84 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 SNORA6-201ENST00000384033 151 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 SNORA40.19-201ENST00000390846 128 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 IPO7P1-201ENST00000442031 636 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXD12P35452 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXD12P35452 PCNPP5-201ENST00000452246 481 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 AC091179.3-201ENST00000474761 144 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 SNORA4.4-201ENST00000515921 135 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 RNU6-1143P-201ENST00000516125 104 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXD12P35452 DEFB122-202ENST00000569013 197 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXD12P35452 AC130454.1-201ENST00000622948 401 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXD12P35452 AC080100.1-201ENST00000624239 5356 ntBASIC2.52□□□□□ -2.01
HOXD12P35452 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXD12P35452 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.52□□□□□ -2.01
HOXD12P35452 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXD12P35452 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
HOXD12P35452 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HOXD12P35452 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HOXD12P35452 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXD12P35452 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXD12P35452 RNU6-713P-201ENST00000384761 107 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HOXD12P35452 AL359511.1-201ENST00000402970 211 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 AL033519.2-201ENST00000403958 392 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 MRPL35P1-201ENST00000404272 572 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 RNU2-20P-201ENST00000410425 191 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 RN7SKP223-201ENST00000410582 62 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 AC004866.1-201ENST00000411748 78 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXD12P35452 Y_RNA.638-201ENST00000459374 113 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXD12P35452 SNORA40.9-201ENST00000515895 93 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 RNU6-408P-201ENST00000515910 100 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 MIR449C-201ENST00000516047 92 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 NDUFA5P6-201ENST00000542110 379 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 RRN3P3-201ENST00000549207 578 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 AL161670.1-201ENST00000554348 137 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 MIR1273D-201ENST00000577266 86 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 MIR4529-201ENST00000578110 78 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 MIR3149-201ENST00000584629 83 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 AL357075.2-201ENST00000614906 189 ntBASIC2.51□□□□□ -2.01
HOXD12P35452 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXD12P35452 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HOXD12P35452 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HOXD12P35452 RNA5SP289-201ENST00000362332 137 ntBASIC2.5□□□□□ -2.01
HOXD12P35452 Y_RNA.105-201ENST00000363182 111 ntBASIC2.5□□□□□ -2.01
HOXD12P35452 RNU1-23P-201ENST00000363361 144 ntBASIC2.5□□□□□ -2.01
HOXD12P35452 RNU6-546P-201ENST00000383991 107 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 749.6 ms