Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SNORA73.2-201ENST00000364946 201 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 RNA5SP283-201ENST00000365604 119 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 RNU6-805P-201ENST00000365643 106 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHISA3A0PJX4 RNU6-418P-201ENST00000384035 107 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 MIR181A2-201ENST00000384863 110 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 RNU6-460P-201ENST00000391158 108 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 RNU6-588P-201ENST00000410281 105 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 AC245047.4-201ENST00000433189 144 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 HMGN1P18-201ENST00000457642 277 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 RPS27P29-201ENST00000463110 252 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 SEM1P1-201ENST00000506694 209 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 RNU6-1234P-201ENST00000516877 103 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 AC027419.1-201ENST00000522976 328 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 MIR2681-201ENST00000581814 105 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.07□□□□□ -1.92
SHISA3A0PJX4 AC090115.4-201ENST00000609970 188 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 AC013412.1-201ENST00000610687 192 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHISA3A0PJX4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.07□□□□□ -1.92
SHISA3A0PJX4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SHISA3A0PJX4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHISA3A0PJX4 PWAR6-201ENST00000552334 4618 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.06□□□□□ -1.92
SHISA3A0PJX4 SNORD56.3-201ENST00000363507 71 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 Y_RNA.432-201ENST00000384087 111 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 Y_RNA.587-201ENST00000391210 103 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 RNA5SP511-201ENST00000410487 115 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 AC016909.1-201ENST00000415916 166 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.06□□□□□ -1.92
SHISA3A0PJX4 AL357134.1-201ENST00000445848 426 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 AC080013.2-201ENST00000460866 323 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 AC080128.1-201ENST00000474389 1917 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 RN7SL323P-201ENST00000494712 295 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 RN7SKP179-201ENST00000516126 217 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 RNU6-63P-201ENST00000516690 95 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 SNORA70.19-201ENST00000516717 90 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 RNU6-919P-201ENST00000516731 104 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 AC093331.1-201ENST00000521474 169 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.06□□□□□ -1.92
SHISA3A0PJX4 AC087499.8-201ENST00000578406 226 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 AC023043.3-201ENST00000593113 385 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 MIR5739-201ENST00000619803 80 ntBASIC3.06□□□□□ -1.92
SHISA3A0PJX4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.06□□□□□ -1.92
SHISA3A0PJX4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHISA3A0PJX4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
SHISA3A0PJX4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHISA3A0PJX4 RNU6-546P-201ENST00000383991 107 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 Y_RNA.563-201ENST00000384707 108 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 MIR591-201ENST00000385290 95 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 SNORA3.3-201ENST00000408712 125 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 RN7SKP27-201ENST00000410684 333 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.05□□□□□ -1.92
SHISA3A0PJX4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.05□□□□□ -1.92
SHISA3A0PJX4 HMGN2P18-201ENST00000450680 270 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 RPS27P22-201ENST00000478056 241 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 RAC1P5-201ENST00000512182 576 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 Y_RNA.686-201ENST00000516548 134 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 SNORA64.4-201ENST00000516632 81 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 RNU2-56P-201ENST00000516826 190 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 RNA5SP490-201ENST00000517141 136 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 AC090142.3-201ENST00000519012 385 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 AC068657.1-201ENST00000520807 306 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.05□□□□□ -1.92
SHISA3A0PJX4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.05□□□□□ -1.92
SHISA3A0PJX4 AC120024.3-201ENST00000603167 156 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 AL606490.9-201ENST00000603331 271 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.05□□□□□ -1.92
SHISA3A0PJX4 MIR6875-201ENST00000617506 72 ntBASIC3.05□□□□□ -1.92
SHISA3A0PJX4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHISA3A0PJX4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHISA3A0PJX4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHISA3A0PJX4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHISA3A0PJX4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHISA3A0PJX4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SHISA3A0PJX4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHISA3A0PJX4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.04□□□□□ -1.92
SHISA3A0PJX4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHISA3A0PJX4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHISA3A0PJX4 MIR148B-201ENST00000362252 99 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 RNU1-22P-201ENST00000363334 158 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 RNU6-1080P-201ENST00000383982 107 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 RNU6-484P-201ENST00000384016 107 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 MIR95-201ENST00000385072 81 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 DBIP2-201ENST00000419076 262 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 AC023449.1-201ENST00000454464 154 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 CYP2C59P-201ENST00000457790 269 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.04□□□□□ -1.92
SHISA3A0PJX4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.04□□□□□ -1.92
SHISA3A0PJX4 AC097462.1-201ENST00000514125 324 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 RNU1-143P-201ENST00000516296 146 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 RNU6-659P-201ENST00000516454 104 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 RNA5SP153-201ENST00000516498 76 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.04□□□□□ -1.92
SHISA3A0PJX4 U1.23-201ENST00000610293 146 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 RNU1-68P-201ENST00000615382 146 ntBASIC3.04□□□□□ -1.92
SHISA3A0PJX4 U1.39-201ENST00000621562 146 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 279.3 ms