Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 AL512353.2-201ENST00000448759 1962 ntBASIC19.69■□□□□ 0.74
RFX6Q8HWS3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX6Q8HWS3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 Z98044.1-201ENST00000632503 1764 ntBASIC19.68■□□□□ 0.74
RFX6Q8HWS3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 AC004980.1-204ENST00000429707 299 ntBASIC19.68■□□□□ 0.74
RFX6Q8HWS3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFX6Q8HWS3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 FAM197Y4-202ENST00000622692 608 ntBASIC19.67■□□□□ 0.74
RFX6Q8HWS3 AC083906.6-201ENST00000641366 219 ntBASIC19.67■□□□□ 0.74
RFX6Q8HWS3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 BCL2-203ENST00000589955 5011 ntBASIC19.67■□□□□ 0.74
RFX6Q8HWS3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX6Q8HWS3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 TSPY20P-201ENST00000450910 630 ntBASIC19.66■□□□□ 0.74
RFX6Q8HWS3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.66■□□□□ 0.74
RFX6Q8HWS3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX6Q8HWS3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms