Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 CETN4P-201ENST00000432407 469 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 AC005002.2-201ENST00000438228 269 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 NDUFB4P10-201ENST00000452541 359 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 RNU7-21P-201ENST00000459430 62 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 RNU7-99P-201ENST00000516271 62 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 SCARNA1-201ENST00000517138 166 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 MRPS36P3-201ENST00000519284 130 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 AC106038.2-201ENST00000520706 568 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 AP002963.1-201ENST00000530590 184 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 MIR5000-201ENST00000577717 103 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 AC012557.2-201ENST00000605919 418 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 AC139792.3-201ENST00000623525 224 ntBASIC0.57□□□□□ -2.32
LRRC39Q96DD0 Y_RNA.116-201ENST00000363292 103 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 SNORA12.1-201ENST00000390873 148 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 AL355796.1-201ENST00000406706 323 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 AC004866.1-201ENST00000411748 78 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 AC133104.1-201ENST00000429100 218 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 MTCO2P7-201ENST00000446518 666 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.56□□□□□ -2.32
LRRC39Q96DD0 MTND1P22-201ENST00000510572 951 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 AC025465.4-201ENST00000513422 638 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 RNU6-430P-201ENST00000517078 107 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
LRRC39Q96DD0 AP003484.1-201ENST00000530974 250 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 MIR4778-201ENST00000577635 80 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.56□□□□□ -2.32
LRRC39Q96DD0 MIR4714-201ENST00000580728 77 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 U6.73-201ENST00000619194 103 ntBASIC0.56□□□□□ -2.32
LRRC39Q96DD0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LRRC39Q96DD0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.55□□□□□ -2.32
LRRC39Q96DD0 RNU6-245P-201ENST00000384020 107 ntBASIC0.55□□□□□ -2.32
LRRC39Q96DD0 RNU6-42P-201ENST00000384165 107 ntBASIC0.55□□□□□ -2.32
LRRC39Q96DD0 RNU6-517P-201ENST00000384362 110 ntBASIC0.55□□□□□ -2.32
LRRC39Q96DD0 RNU6-456P-201ENST00000384493 107 ntBASIC0.55□□□□□ -2.32
LRRC39Q96DD0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.55□□□□□ -2.32
LRRC39Q96DD0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.55□□□□□ -2.32
LRRC39Q96DD0 NDUFA5P4-201ENST00000436704 385 ntBASIC0.55□□□□□ -2.32
LRRC39Q96DD0 RPEP5-201ENST00000441137 268 ntBASIC0.55□□□□□ -2.32
LRRC39Q96DD0 RPS27P22-201ENST00000478056 241 ntBASIC0.55□□□□□ -2.32
LRRC39Q96DD0 AC098869.1-201ENST00000481627 292 ntBASIC0.55□□□□□ -2.32
LRRC39Q96DD0 RNU7-128P-201ENST00000517247 62 ntBASIC0.55□□□□□ -2.32
LRRC39Q96DD0 AC090616.2-202ENST00000584248 222 ntBASIC0.55□□□□□ -2.32
LRRC39Q96DD0 MIR518E-201ENST00000385252 88 ntBASIC0.54□□□□□ -2.32
LRRC39Q96DD0 SNORA40.3-201ENST00000390964 122 ntBASIC0.54□□□□□ -2.32
LRRC39Q96DD0 RNU6-1186P-201ENST00000410429 97 ntBASIC0.54□□□□□ -2.32
LRRC39Q96DD0 RNU6-195P-201ENST00000411352 109 ntBASIC0.54□□□□□ -2.32
LRRC39Q96DD0 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.54□□□□□ -2.32
LRRC39Q96DD0 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.54□□□□□ -2.32
LRRC39Q96DD0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.54□□□□□ -2.32
LRRC39Q96DD0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.54□□□□□ -2.32
LRRC39Q96DD0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.54□□□□□ -2.32
LRRC39Q96DD0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.54□□□□□ -2.32
LRRC39Q96DD0 SNORD42A-201ENST00000459584 64 ntBASIC0.54□□□□□ -2.32
LRRC39Q96DD0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.54□□□□□ -2.32
LRRC39Q96DD0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.54□□□□□ -2.32
LRRC39Q96DD0 PRELID3BP2-201ENST00000605362 201 ntBASIC0.54□□□□□ -2.32
LRRC39Q96DD0 SCARNA4-201ENST00000629045 128 ntBASIC0.54□□□□□ -2.32
LRRC39Q96DD0 SNORD116-13-201ENST00000384408 92 ntBASIC0.53□□□□□ -2.32
LRRC39Q96DD0 RNY1P14-201ENST00000384426 108 ntBASIC0.53□□□□□ -2.32
LRRC39Q96DD0 RNU6-903P-201ENST00000391270 109 ntBASIC0.53□□□□□ -2.32
LRRC39Q96DD0 MTCO2P34-201ENST00000421994 607 ntBASIC0.53□□□□□ -2.32
LRRC39Q96DD0 AL035398.1-201ENST00000430869 322 ntBASIC0.53□□□□□ -2.32
LRRC39Q96DD0 MTND4P32-201ENST00000437189 1237 ntBASIC0.53□□□□□ -2.32
LRRC39Q96DD0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.53□□□□□ -2.32
LRRC39Q96DD0 AC113410.1-201ENST00000505029 247 ntBASIC0.53□□□□□ -2.32
LRRC39Q96DD0 RNA5SP54-201ENST00000516951 92 ntBASIC0.53□□□□□ -2.32
LRRC39Q96DD0 MRPS36P4-201ENST00000534436 298 ntBASIC0.53□□□□□ -2.32
LRRC39Q96DD0 AC025627.3-201ENST00000582078 182 ntBASIC0.53□□□□□ -2.32
LRRC39Q96DD0 MIR548AB-201ENST00000584917 84 ntBASIC0.53□□□□□ -2.32
LRRC39Q96DD0 SNORD11B-201ENST00000607707 90 ntBASIC0.53□□□□□ -2.32
LRRC39Q96DD0 AC009229.3-201ENST00000608056 282 ntBASIC0.53□□□□□ -2.32
LRRC39Q96DD0 ELL2P3-201ENST00000457883 1602 ntBASIC0.53□□□□□ -2.33
LRRC39Q96DD0 AP000568.1-201ENST00000282964 442 ntBASIC0.52□□□□□ -2.33
LRRC39Q96DD0 Y_RNA.122-201ENST00000363331 96 ntBASIC0.52□□□□□ -2.33
LRRC39Q96DD0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.52□□□□□ -2.33
LRRC39Q96DD0 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.52□□□□□ -2.33
LRRC39Q96DD0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.52□□□□□ -2.33
LRRC39Q96DD0 AC022493.2-201ENST00000506122 481 ntBASIC0.52□□□□□ -2.33
LRRC39Q96DD0 RPL39P5-202ENST00000512505 151 ntBASIC0.52□□□□□ -2.33
LRRC39Q96DD0 RNU7-28P-201ENST00000516759 62 ntBASIC0.52□□□□□ -2.33
LRRC39Q96DD0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.52□□□□□ -2.33
LRRC39Q96DD0 AC018659.1-201ENST00000551083 169 ntBASIC0.52□□□□□ -2.33
LRRC39Q96DD0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.52□□□□□ -2.33
LRRC39Q96DD0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
LRRC39Q96DD0 RNU6-1266P-201ENST00000362794 105 ntBASIC0.51□□□□□ -2.33
LRRC39Q96DD0 MIR562-201ENST00000384894 95 ntBASIC0.51□□□□□ -2.33
LRRC39Q96DD0 SNORA75.2-201ENST00000391138 150 ntBASIC0.51□□□□□ -2.33
LRRC39Q96DD0 SNORA75.3-201ENST00000391231 150 ntBASIC0.51□□□□□ -2.33
LRRC39Q96DD0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.51□□□□□ -2.33
LRRC39Q96DD0 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
LRRC39Q96DD0 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.51□□□□□ -2.33
LRRC39Q96DD0 AL049830.1-201ENST00000468034 425 ntBASIC0.51□□□□□ -2.33
LRRC39Q96DD0 MTCO3P38-201ENST00000468910 766 ntBASIC0.51□□□□□ -2.33
LRRC39Q96DD0 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.51□□□□□ -2.33
LRRC39Q96DD0 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.51□□□□□ -2.33
LRRC39Q96DD0 RNU6-917P-201ENST00000516294 104 ntBASIC0.51□□□□□ -2.33
LRRC39Q96DD0 SCOCP1-201ENST00000554676 349 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms