Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC011406.1-201ENST00000512440 370 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.23□□□□□ -2.21
HMGCS1Q01581 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGCS1Q01581 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.23□□□□□ -2.21
HMGCS1Q01581 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.23□□□□□ -2.21
HMGCS1Q01581 AL160236.1-201ENST00000556317 195 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGCS1Q01581 SUB1P3-201ENST00000564581 315 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 SNRPGP20-201ENST00000604477 205 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGCS1Q01581 AC124303.1-201ENST00000605703 360 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 U4.5-201ENST00000617137 123 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 AC137590.2-201ENST00000619709 240 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 AC006504.8-201ENST00000621046 635 ntBASIC1.23□□□□□ -2.21
HMGCS1Q01581 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HMGCS1Q01581 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HMGCS1Q01581 MTND4P5-201ENST00000435821 1374 ntBASIC1.22□□□□□ -2.21
HMGCS1Q01581 RNU1-96P-201ENST00000364163 162 ntBASIC1.22□□□□□ -2.21
HMGCS1Q01581 Y_RNA.573-201ENST00000384763 105 ntBASIC1.22□□□□□ -2.21
HMGCS1Q01581 RNU1-78P-201ENST00000391248 165 ntBASIC1.22□□□□□ -2.21
HMGCS1Q01581 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.22□□□□□ -2.21
HMGCS1Q01581 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.22□□□□□ -2.21
HMGCS1Q01581 RNA5SP504-201ENST00000410676 117 ntBASIC1.22□□□□□ -2.21
HMGCS1Q01581 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.22□□□□□ -2.21
HMGCS1Q01581 DAP3P1-201ENST00000441522 278 ntBASIC1.22□□□□□ -2.21
HMGCS1Q01581 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGCS1Q01581 RPL30P10-201ENST00000488148 337 ntBASIC1.22□□□□□ -2.21
HMGCS1Q01581 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGCS1Q01581 ACA59.1-201ENST00000515966 143 ntBASIC1.22□□□□□ -2.21
HMGCS1Q01581 RNU6-948P-201ENST00000516374 107 ntBASIC1.22□□□□□ -2.21
HMGCS1Q01581 RNA5SP437-201ENST00000517249 129 ntBASIC1.22□□□□□ -2.21
HMGCS1Q01581 AC090821.2-201ENST00000523552 176 ntBASIC1.22□□□□□ -2.21
HMGCS1Q01581 AC084364.2-201ENST00000546924 395 ntBASIC1.22□□□□□ -2.21
HMGCS1Q01581 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.22□□□□□ -2.21
HMGCS1Q01581 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.22□□□□□ -2.21
HMGCS1Q01581 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.22□□□□□ -2.21
HMGCS1Q01581 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.22□□□□□ -2.21
HMGCS1Q01581 RNU6-1059P-201ENST00000363752 98 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 RNU4-9P-201ENST00000364951 139 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 Y_RNA.301-201ENST00000364990 103 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGCS1Q01581 UBE2V1P8-201ENST00000437166 265 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 MTATP6P13-201ENST00000438531 667 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 RNU7-57P-201ENST00000459540 60 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 AC011352.1-201ENST00000512300 793 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 RNU1-117P-201ENST00000517041 158 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 RNU6-58P-201ENST00000517143 103 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 RNA5SP454-201ENST00000517231 127 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGCS1Q01581 AC008269.2-201ENST00000561915 1105 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGCS1Q01581 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.21□□□□□ -2.22
HMGCS1Q01581 snoU13.31-201ENST00000607291 104 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 MIR338-201ENST00000636369 67 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 AC073869.6-201ENST00000640656 341 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 AC010615.1-201ENST00000594254 1764 ntBASIC1.21□□□□□ -2.22
HMGCS1Q01581 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HMGCS1Q01581 Y_RNA.157-201ENST00000363638 102 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 SNORA33-201ENST00000363664 130 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 RNU6-1235P-201ENST00000384559 107 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 Y_RNA.533-201ENST00000384596 114 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 MIR520A-201ENST00000384862 85 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 MIR586-201ENST00000385035 97 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 MIR548B-201ENST00000385247 97 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 FGF7P8-201ENST00000402994 292 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 Y_RNA.595-201ENST00000410403 105 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 RNU6-57P-201ENST00000411348 103 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 AC009161.1-201ENST00000417306 376 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGCS1Q01581 HSPE1P9-201ENST00000440046 311 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.2□□□□□ -2.22
HMGCS1Q01581 RNU6-498P-201ENST00000459468 107 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 RNU4-49P-201ENST00000516080 140 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 RNU6-566P-201ENST00000516790 107 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGCS1Q01581 AC027288.2-201ENST00000553028 243 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 MIR5696-201ENST00000578474 85 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 AC069114.2-201ENST00000604699 304 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 AC006001.4-201ENST00000622243 395 ntBASIC1.2□□□□□ -2.22
HMGCS1Q01581 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.2□□□□□ -2.22
HMGCS1Q01581 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
HMGCS1Q01581 MIR26B-201ENST00000362251 77 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 Y_RNA.48-201ENST00000362710 103 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 SNORD115-8-201ENST00000363856 82 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 SNORD115-32-201ENST00000364079 82 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 RNU6-1019P-201ENST00000364424 107 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 SNORD115-38-201ENST00000365037 82 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 RNA5SP118-201ENST00000410385 109 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 AC004965.1-201ENST00000413033 213 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 RPL30P16-201ENST00000419341 429 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 USP9YP30-201ENST00000430729 455 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 AC015922.2-201ENST00000435593 184 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 Y_RNA.638-201ENST00000459374 113 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 AC099513.1-201ENST00000490423 301 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 SNORA25.14-201ENST00000516481 132 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 RNU2-34P-201ENST00000516534 121 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 RNU6-344P-201ENST00000516635 111 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 RNA5SP54-201ENST00000516951 92 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 241.7 ms