Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
EPHB3P54753 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.31□□□□□ -1.88
EPHB3P54753 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
EPHB3P54753 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.3□□□□□ -1.88
EPHB3P54753 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
EPHB3P54753 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.3□□□□□ -1.88
EPHB3P54753 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
EPHB3P54753 RNU6-199P-201ENST00000362954 107 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 RNU4-10P-201ENST00000364383 140 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 MIR526A2-201ENST00000390198 65 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 RNU6-710P-201ENST00000410424 105 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 RNU2-52P-201ENST00000410680 190 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.3□□□□□ -1.88
EPHB3P54753 PTGES3P4-201ENST00000426243 356 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.3□□□□□ -1.88
EPHB3P54753 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.3□□□□□ -1.88
EPHB3P54753 AC021205.2-201ENST00000480069 347 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 SCARNA8-201ENST00000515924 131 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 RNU6-344P-201ENST00000516635 111 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.3□□□□□ -1.88
EPHB3P54753 EIF4BP1-201ENST00000554881 351 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.3□□□□□ -1.88
EPHB3P54753 Y_RNA.802-201ENST00000614892 130 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 AC006386.2-201ENST00000624491 75 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 AC012005.1-201ENST00000624575 75 ntBASIC3.3□□□□□ -1.88
EPHB3P54753 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
EPHB3P54753 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
EPHB3P54753 FAM35BP-202ENST00000497389 3337 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 AC058791.1-201ENST00000608412 3198 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
EPHB3P54753 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.29□□□□□ -1.88
EPHB3P54753 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
EPHB3P54753 MIR30E-201ENST00000362104 92 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 RNU6-1048P-201ENST00000364054 107 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 Y_RNA.243-201ENST00000364481 109 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 SNORA71.1-201ENST00000364523 117 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 Y_RNA.361-201ENST00000365515 120 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 Y_RNA.368-201ENST00000365547 113 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 CBX3P9-201ENST00000402326 552 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.29□□□□□ -1.88
EPHB3P54753 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.29□□□□□ -1.88
EPHB3P54753 SNORA59A-201ENST00000459326 152 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 AC091179.1-201ENST00000461606 579 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 RPL31P41-201ENST00000477967 372 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 RNU4-57P-201ENST00000515980 135 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 RNU5F-2P-201ENST00000516066 82 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 RNU6-659P-201ENST00000516454 104 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 AC093331.1-201ENST00000521474 169 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 AC011602.1-201ENST00000546484 331 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 MIR3923-201ENST00000579521 83 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 MIR5688-201ENST00000580619 83 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 MIR3609-201ENST00000582661 80 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 AL391813.1-201ENST00000603098 260 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.29□□□□□ -1.88
EPHB3P54753 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
EPHB3P54753 AC007496.3-201ENST00000624987 3443 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
EPHB3P54753 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
EPHB3P54753 GABRG2-229ENST00000641017 3628 ntBASIC3.28□□□□□ -1.88
EPHB3P54753 AC000403.1-201ENST00000613696 3585 ntBASIC3.28□□□□□ -1.88
EPHB3P54753 Y_RNA.293-201ENST00000364908 93 ntBASIC3.28□□□□□ -1.88
EPHB3P54753 SNORA44-201ENST00000384584 132 ntBASIC3.28□□□□□ -1.88
EPHB3P54753 MIR184-201ENST00000384962 84 ntBASIC3.28□□□□□ -1.88
EPHB3P54753 RNA5SP201-201ENST00000410316 124 ntBASIC3.28□□□□□ -1.88
EPHB3P54753 AC022018.1-201ENST00000430685 241 ntBASIC3.28□□□□□ -1.88
EPHB3P54753 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.28□□□□□ -1.88
EPHB3P54753 RNU6-453P-201ENST00000516819 85 ntBASIC3.28□□□□□ -1.88
EPHB3P54753 RNU6-711P-201ENST00000517255 106 ntBASIC3.28□□□□□ -1.88
EPHB3P54753 AL137843.1-201ENST00000605078 385 ntBASIC3.28□□□□□ -1.88
EPHB3P54753 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
EPHB3P54753 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
EPHB3P54753 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
EPHB3P54753 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
EPHB3P54753 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
EPHB3P54753 RNU6-270P-201ENST00000364131 105 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 RNU6-1056P-201ENST00000383996 107 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 RNU6-643P-201ENST00000384018 107 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 Y_RNA.572-201ENST00000384757 98 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 RN7SKP220-201ENST00000410611 288 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 RNA5SP504-201ENST00000410676 117 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 AC004866.1-201ENST00000411748 78 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.27□□□□□ -1.89
EPHB3P54753 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.27□□□□□ -1.89
EPHB3P54753 RNU6-1007P-201ENST00000516586 107 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 RNU6-107P-201ENST00000516643 102 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 SNORD59.2-201ENST00000516873 68 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.27□□□□□ -1.89
EPHB3P54753 MIR3646-201ENST00000578301 84 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 MIR4425-201ENST00000580572 84 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 AL034555.1-201ENST00000604816 211 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 SNORD11B-201ENST00000607707 90 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 AP001340.1-201ENST00000624405 217 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 AC068205.3-201ENST00000636385 468 ntBASIC3.27□□□□□ -1.89
EPHB3P54753 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
EPHB3P54753 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.26□□□□□ -1.89
EPHB3P54753 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.26□□□□□ -1.89
EPHB3P54753 AC110774.1-201ENST00000623567 2018 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms