Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC85AQ96PX6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 SNORD114-7-201ENST00000362520 77 ntBASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 RNA5SP42-201ENST00000364278 115 ntBASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 RNU6-643P-201ENST00000384018 107 ntBASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 Y_RNA.420-201ENST00000384043 110 ntBASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 SNORA67.2-201ENST00000384300 149 ntBASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 AL035461.1-201ENST00000421490 332 ntBASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 RNU7-141P-201ENST00000459304 62 ntBASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 SCARNA8-201ENST00000515924 131 ntBASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 LARP7P3-201ENST00000579888 337 ntBASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CCDC85AQ96PX6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 AC018555.1-201ENST00000567548 1980 ntBASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 AC068700.1-201ENST00000565862 3754 ntBASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 MIR367-201ENST00000362299 68 ntBASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 RNU6-198P-201ENST00000384258 104 ntBASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 RNU1-57P-201ENST00000384491 166 ntBASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 RNU6-750P-201ENST00000390946 107 ntBASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 RNU2-49P-201ENST00000410666 184 ntBASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 Z92545.1-201ENST00000411782 234 ntBASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 AC245047.8-201ENST00000456455 284 ntBASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 RNU6-453P-201ENST00000516819 85 ntBASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 AC005000.2-201ENST00000605468 310 ntBASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 AC025754.2-201ENST00000606491 432 ntBASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 AL353746.1-201ENST00000566293 6881 ntBASIC4.29□□□□□ -1.72
CCDC85AQ96PX6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 RNU6-728P-201ENST00000365375 104 ntBASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 Y_RNA.542-201ENST00000384641 111 ntBASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 SNORA20-201ENST00000384662 132 ntBASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 Y_RNA.572-201ENST00000384757 98 ntBASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 MIR15B-201ENST00000385045 98 ntBASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 AL137843.1-201ENST00000605078 385 ntBASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC85AQ96PX6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
CCDC85AQ96PX6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 SNORA48.5-201ENST00000391143 135 ntBASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 HMGN2P8-201ENST00000391458 268 ntBASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 RN7SL504P-201ENST00000494496 287 ntBASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 RNU6-579P-201ENST00000516879 102 ntBASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 HSPE1P18-201ENST00000517602 280 ntBASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC85AQ96PX6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC85AQ96PX6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
CCDC85AQ96PX6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC85AQ96PX6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC85AQ96PX6 SNORA38.1-201ENST00000364172 131 ntBASIC4.26□□□□□ -1.73
CCDC85AQ96PX6 RNY3P5-201ENST00000384127 102 ntBASIC4.26□□□□□ -1.73
CCDC85AQ96PX6 MIR586-201ENST00000385035 97 ntBASIC4.26□□□□□ -1.73
CCDC85AQ96PX6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
CCDC85AQ96PX6 AC010099.1-201ENST00000455434 375 ntBASIC4.26□□□□□ -1.73
CCDC85AQ96PX6 AP000867.2-201ENST00000532468 320 ntBASIC4.26□□□□□ -1.73
CCDC85AQ96PX6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC85AQ96PX6 MIR4276-201ENST00000584832 70 ntBASIC4.26□□□□□ -1.73
CCDC85AQ96PX6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC85AQ96PX6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC85AQ96PX6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC85AQ96PX6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
CCDC85AQ96PX6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC85AQ96PX6 Y_RNA.229-201ENST00000364347 113 ntBASIC4.25□□□□□ -1.73
CCDC85AQ96PX6 RNU6-407P-201ENST00000365280 104 ntBASIC4.25□□□□□ -1.73
CCDC85AQ96PX6 MIR548B-201ENST00000385247 97 ntBASIC4.25□□□□□ -1.73
CCDC85AQ96PX6 AL606845.1-201ENST00000404881 255 ntBASIC4.25□□□□□ -1.73
CCDC85AQ96PX6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
CCDC85AQ96PX6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC85AQ96PX6 RNU7-197P-201ENST00000458836 62 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms